RNA–Protein interactions for RNA: ENST00000469601.1

RTN4R-205, Transcript of reticulon 4 receptor, humanhuman

TSL 3

Gene RTN4R, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-205ENST00000469601 OR52Z1P0C646 297 aa23.73■■□□□ 1.39
RTN4R-205ENST00000469601 FGFR4P22455 802 aa23.73■■□□□ 1.39
RTN4R-205ENST00000469601 U2AF2P26368 475 aaKnown RBP eCLIP23.73■■□□□ 1.39
RTN4R-205ENST00000469601 MXD4Q14582 209 aaPredicted RBP23.73■■□□□ 1.39
RTN4R-205ENST00000469601 ZNF174Q15697 407 aa23.73■■□□□ 1.39
RTN4R-205ENST00000469601 CATSPER4Q7RTX7 472 aa23.73■■□□□ 1.39
RTN4R-205ENST00000469601 SRGAP1Q7Z6B7 1085 aa23.73■■□□□ 1.39
RTN4R-205ENST00000469601 KSR1Q8IVT5 923 aa23.73■■□□□ 1.39
RTN4R-205ENST00000469601 ADAMTS19Q8TE59 1207 aa23.73■■□□□ 1.39
RTN4R-205ENST00000469601 PPP2R3CQ969Q6 453 aa23.73■■□□□ 1.39
RTN4R-205ENST00000469601 TMEM143Q96AN5 459 aa23.73■■□□□ 1.39
RTN4R-205ENST00000469601 TMX3Q96JJ7 454 aa23.73■■□□□ 1.39
RTN4R-205ENST00000469601 TBC1D32Q96NH3 1257 aa23.73■■□□□ 1.39
RTN4R-205ENST00000469601 TRAIPQ9BWF2 469 aa23.73■■□□□ 1.39
RTN4R-205ENST00000469601 UBE2ZQ9H832 354 aaPredicted RBP23.73■■□□□ 1.39
RTN4R-205ENST00000469601 RALGAPA2Q2PPJ7 1873 aa23.73■■□□□ 1.39
RTN4R-205ENST00000469601 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.72■■□□□ 1.39
RTN4R-205ENST00000469601 CSDE1O75534 798 aaKnown RBP23.72■■□□□ 1.39
RTN4R-205ENST00000469601 DGAT1O75907 488 aa23.72■■□□□ 1.39
RTN4R-205ENST00000469601 FGFR1P11362 822 aa23.72■■□□□ 1.39
RTN4R-205ENST00000469601 BMP1P13497 986 aa23.72■■□□□ 1.39
RTN4R-205ENST00000469601 LAG3P18627 525 aa23.72■■□□□ 1.39
RTN4R-205ENST00000469601 LAMTOR4Q0VGL1 99 aa23.72■■□□□ 1.39
RTN4R-205ENST00000469601 TCEAL5Q5H9L2 206 aa23.72■■□□□ 1.39
RTN4R-205ENST00000469601 KLHL23Q8NBE8 558 aa23.72■■□□□ 1.39
RTN4R-205ENST00000469601 IFT122Q9HBG6 1241 aa23.72■■□□□ 1.39
RTN4R-205ENST00000469601 TUFT1Q9NNX1 390 aa23.72■■□□□ 1.39
RTN4R-205ENST00000469601 PRUNE2Q8WUY3 3088 aa23.72■■□□□ 1.39
RTN4R-205ENST00000469601 WDR81Q562E7 1941 aa23.71■■□□□ 1.39
RTN4R-205ENST00000469601 POTEMA6NI47 508 aa23.71■■□□□ 1.39
RTN4R-205ENST00000469601 ZBTB39O15060 712 aa23.71■■□□□ 1.39
RTN4R-205ENST00000469601 SRGAP2CP0DJJ0 459 aa23.71■■□□□ 1.39
RTN4R-205ENST00000469601 TECP42680 631 aa23.71■■□□□ 1.39
RTN4R-205ENST00000469601 RAB27AP51159 221 aa23.71■■□□□ 1.39
RTN4R-205ENST00000469601 TFDP1Q14186 410 aa23.71■■□□□ 1.39
RTN4R-205ENST00000469601 PCBP1Q15365 356 aaKnown RBP eCLIP23.71■■□□□ 1.39
RTN4R-205ENST00000469601 TWF2Q6IBS0 349 aaKnown RBP23.71■■□□□ 1.39
RTN4R-205ENST00000469601 FERMT3Q86UX7 667 aa23.71■■□□□ 1.39
RTN4R-205ENST00000469601 LRRC43Q8N309 656 aa23.71■■□□□ 1.39
RTN4R-205ENST00000469601 RNF169Q8NCN4 708 aa23.71■■□□□ 1.39
RTN4R-205ENST00000469601 UHRF1Q96T88 793 aaPredicted RBP23.71■■□□□ 1.39
RTN4R-205ENST00000469601 ALG13Q9NP73 1137 aaKnown RBP23.71■■□□□ 1.39
RTN4R-205ENST00000469601 TYW1Q9NV66 732 aaKnown RBP23.71■■□□□ 1.39
RTN4R-205ENST00000469601 PIN4Q9Y237 131 aaKnown RBP23.71■■□□□ 1.39
RTN4R-205ENST00000469601 ITGB1P05556 798 aa23.7■■□□□ 1.38
RTN4R-205ENST00000469601 PHKA2P46019 1235 aa23.7■■□□□ 1.38
RTN4R-205ENST00000469601 RARRES1P49788 294 aa23.7■■□□□ 1.38
RTN4R-205ENST00000469601 KCNQ1P51787 676 aa23.7■■□□□ 1.38
RTN4R-205ENST00000469601 UBE3AQ05086 875 aa23.7■■□□□ 1.38
RTN4R-205ENST00000469601 RNF149Q8NC42 400 aa23.7■■□□□ 1.38
RTN4R-205ENST00000469601 SPPL3Q8TCT6 385 aa23.7■■□□□ 1.38
RTN4R-205ENST00000469601 PABPC5Q96DU9 382 aaKnown RBP23.7■■□□□ 1.38
RTN4R-205ENST00000469601 CASD1Q96PB1 797 aa23.7■■□□□ 1.38
RTN4R-205ENST00000469601 POLR3CQ9BUI4 534 aaPredicted RBP23.7■■□□□ 1.38
RTN4R-205ENST00000469601 BMP2KQ9NSY1 1161 aaPredicted RBP23.7■■□□□ 1.38
RTN4R-205ENST00000469601 POU5F1BQ06416 359 aa23.69■■□□□ 1.38
RTN4R-205ENST00000469601 ZNF598Q86UK7 904 aaKnown RBP23.69■■□□□ 1.38
RTN4R-205ENST00000469601 NACC1Q96RE7 527 aa23.69■■□□□ 1.38
RTN4R-205ENST00000469601 MRPL9Q9BYD2 267 aaKnown RBP23.69■■□□□ 1.38
RTN4R-205ENST00000469601 AGPAT5Q9NUQ2 364 aa23.69■■□□□ 1.38
RTN4R-205ENST00000469601 STK24Q9Y6E0 443 aa23.69■■□□□ 1.38
RTN4R-205ENST00000469601 CUL9Q8IWT3 2517 aa23.69■■□□□ 1.38
RTN4R-205ENST00000469601 LOXHD1Q8IVV2 1947 aa23.69■■□□□ 1.38
RTN4R-205ENST00000469601 TNFRSF10AO00220 468 aa23.68■■□□□ 1.38
RTN4R-205ENST00000469601 SPATA31C1P0DKV0 1188 aa23.68■■□□□ 1.38
RTN4R-205ENST00000469601 MUTP22033 750 aa23.68■■□□□ 1.38
RTN4R-205ENST00000469601 KCNA5P22460 613 aa23.68■■□□□ 1.38
RTN4R-205ENST00000469601 RPA1P27694 616 aa23.68■■□□□ 1.38
RTN4R-205ENST00000469601 NCBP1Q09161 790 aaKnown RBP23.68■■□□□ 1.38
RTN4R-205ENST00000469601 PUS10Q3MIT2 529 aaKnown RBP23.68■■□□□ 1.38
RTN4R-205ENST00000469601 LEXMQ3ZCV2 418 aa23.68■■□□□ 1.38
RTN4R-205ENST00000469601 HAUS3Q68CZ6 603 aa23.68■■□□□ 1.38
RTN4R-205ENST00000469601 CATSPER3Q86XQ3 398 aa23.68■■□□□ 1.38
RTN4R-205ENST00000469601 THNSL1Q8IYQ7 743 aa23.68■■□□□ 1.38
RTN4R-205ENST00000469601 COLGALT1Q8NBJ5 622 aa23.68■■□□□ 1.38
RTN4R-205ENST00000469601 PIGOQ8TEQ8 1089 aa23.68■■□□□ 1.38
RTN4R-205ENST00000469601 RAB34Q9BZG1 259 aa23.68■■□□□ 1.38
RTN4R-205ENST00000469601 CWH43Q9H720 699 aa23.68■■□□□ 1.38
RTN4R-205ENST00000469601 XPNPEP1Q9NQW7 623 aa23.68■■□□□ 1.38
RTN4R-205ENST00000469601 FAM105AQ9NUU6 356 aa23.68■■□□□ 1.38
RTN4R-205ENST00000469601 DBR1Q9UK59 544 aaKnown RBP23.68■■□□□ 1.38
RTN4R-205ENST00000469601 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.68■■□□□ 1.38
RTN4R-205ENST00000469601 CARNS1A5YM72 827 aa23.67■■□□□ 1.38
RTN4R-205ENST00000469601 LAD1O00515 517 aa23.67■■□□□ 1.38
RTN4R-205ENST00000469601 ZNF623O75123 536 aa23.67■■□□□ 1.38
RTN4R-205ENST00000469601 ERLIN2O94905 339 aa23.67■■□□□ 1.38
RTN4R-205ENST00000469601 PPM1AP35813 382 aa23.67■■□□□ 1.38
RTN4R-205ENST00000469601 FXR2P51116 673 aaKnown RBP eCLIP23.67■■□□□ 1.38
RTN4R-205ENST00000469601 COL19A1Q14993 1142 aa23.67■■□□□ 1.38
RTN4R-205ENST00000469601 POF1BQ8WVV4 589 aa23.67■■□□□ 1.38
RTN4R-205ENST00000469601 PGBD4Q96DM1 585 aa23.67■■□□□ 1.38
RTN4R-205ENST00000469601 RNF19AQ9NV58 838 aa23.67■■□□□ 1.38
RTN4R-205ENST00000469601 NLRC5Q86WI3 1866 aa23.66■■□□□ 1.38
RTN4R-205ENST00000469601 H3BQV1 296 aa23.66■■□□□ 1.38
RTN4R-205ENST00000469601 FGF18O76093 207 aa23.66■■□□□ 1.38
RTN4R-205ENST00000469601 PDIA5Q14554 519 aa23.66■■□□□ 1.38
RTN4R-205ENST00000469601 CLLU1OSQ5K130 101 aa23.66■■□□□ 1.38
RTN4R-205ENST00000469601 MCTP1Q6DN14 999 aa23.66■■□□□ 1.38
RTN4R-205ENST00000469601 PDE12Q6L8Q7 609 aaKnown RBP23.66■■□□□ 1.38
RTN4R-205ENST00000469601 GLB1LQ6UWU2 654 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms