RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 ISCA1Q9BUE6 129 aa7.69□□□□□ -1.18
PTCD3-208ENST00000469585 TNFRSF12AQ9NP84 129 aa7.69□□□□□ -1.18
PTCD3-208ENST00000469585 CLDND1Q9NY35 253 aa7.69□□□□□ -1.18
PTCD3-208ENST00000469585 RNF181Q9P0P0 153 aa7.69□□□□□ -1.18
PTCD3-208ENST00000469585 MAGEC2Q9UBF1 373 aaPredicted RBP7.69□□□□□ -1.18
PTCD3-208ENST00000469585 ANKRD36CQ5JPF3 1778 aa7.69□□□□□ -1.18
PTCD3-208ENST00000469585 N4BP2Q86UW6 1770 aaPredicted RBP7.69□□□□□ -1.18
PTCD3-208ENST00000469585 C22orf46C9J442 243 aa7.68□□□□□ -1.18
PTCD3-208ENST00000469585 SOD2P04179 222 aa7.68□□□□□ -1.18
PTCD3-208ENST00000469585 GLI4P10075 376 aa7.68□□□□□ -1.18
PTCD3-208ENST00000469585 YBX3P16989 372 aaKnown RBP eCLIP7.68□□□□□ -1.18
PTCD3-208ENST00000469585 GRK2P25098 689 aa7.68□□□□□ -1.18
PTCD3-208ENST00000469585 GRK3P35626 688 aa7.68□□□□□ -1.18
PTCD3-208ENST00000469585 KCNJ4P48050 445 aa7.68□□□□□ -1.18
PTCD3-208ENST00000469585 PAK1Q13153 545 aa7.68□□□□□ -1.18
PTCD3-208ENST00000469585 GRAPQ13588 217 aa7.68□□□□□ -1.18
PTCD3-208ENST00000469585 CCDC57Q2TAC2 916 aa7.68□□□□□ -1.18
PTCD3-208ENST00000469585 SLC10A5Q5PT55 438 aa7.68□□□□□ -1.18
PTCD3-208ENST00000469585 DPP8Q6V1X1 898 aaPredicted RBP7.68□□□□□ -1.18
PTCD3-208ENST00000469585 RIOX2Q8IUF8 465 aa7.68□□□□□ -1.18
PTCD3-208ENST00000469585 GRAPLQ8TC17 118 aaPredicted RBP7.68□□□□□ -1.18
PTCD3-208ENST00000469585 TRMT2BQ96GJ1 504 aaKnown RBP7.68□□□□□ -1.18
PTCD3-208ENST00000469585 YTHDC1Q96MU7 727 aaKnown RBP7.68□□□□□ -1.18
PTCD3-208ENST00000469585 EYA3Q99504 573 aa7.68□□□□□ -1.18
PTCD3-208ENST00000469585 IPPKQ9H8X2 491 aa7.68□□□□□ -1.18
PTCD3-208ENST00000469585 NRXN2Q9P2S2 1712 aa7.68□□□□□ -1.18
PTCD3-208ENST00000469585 CDHR2Q9BYE9 1310 aa7.68□□□□□ -1.18
PTCD3-208ENST00000469585 ARFGEF2Q9Y6D5 1785 aa7.68□□□□□ -1.18
PTCD3-208ENST00000469585 A0A087X0B3 334 aa7.67□□□□□ -1.18
PTCD3-208ENST00000469585 ANKRD18BA2A2Z9 1011 aa7.67□□□□□ -1.18
PTCD3-208ENST00000469585 GRM8O00222 908 aa7.67□□□□□ -1.18
PTCD3-208ENST00000469585 ASLP04424 464 aa7.67□□□□□ -1.18
PTCD3-208ENST00000469585 UBTFL1P0CB47 393 aaPredicted RBP7.67□□□□□ -1.18
PTCD3-208ENST00000469585 CTSWP56202 376 aa7.67□□□□□ -1.18
PTCD3-208ENST00000469585 IFIT5Q13325 482 aaKnown RBP7.67□□□□□ -1.18
PTCD3-208ENST00000469585 GCKRQ14397 625 aa7.67□□□□□ -1.18
PTCD3-208ENST00000469585 ZNF460Q14592 562 aa7.67□□□□□ -1.18
PTCD3-208ENST00000469585 CRY2Q49AN0 593 aa7.67□□□□□ -1.18
PTCD3-208ENST00000469585 ZKSCAN2Q63HK3 967 aa7.67□□□□□ -1.18
PTCD3-208ENST00000469585 ABHD17CQ6PCB6 329 aa7.67□□□□□ -1.18
PTCD3-208ENST00000469585 SSH1Q8WYL5 1049 aa7.67□□□□□ -1.18
PTCD3-208ENST00000469585 ARHGAP45Q92619 1136 aa7.67□□□□□ -1.18
PTCD3-208ENST00000469585 TNPO3Q9Y5L0 923 aaKnown RBP7.67□□□□□ -1.18
PTCD3-208ENST00000469585 CHD4Q14839 1912 aa7.67□□□□□ -1.18
PTCD3-208ENST00000469585 KLRG2A4D1S0 409 aaPredicted RBP7.66□□□□□ -1.18
PTCD3-208ENST00000469585 FAM47E-STBD1D6RA91 191 aa7.66□□□□□ -1.18
PTCD3-208ENST00000469585 BIN1O00499 593 aa7.66□□□□□ -1.18
PTCD3-208ENST00000469585 SRGAP3O43295 1099 aa7.66□□□□□ -1.18
PTCD3-208ENST00000469585 CKMP06732 381 aa7.66□□□□□ -1.18
PTCD3-208ENST00000469585 GLI1P08151 1106 aa7.66□□□□□ -1.18
PTCD3-208ENST00000469585 GNAI3P08754 354 aa7.66□□□□□ -1.18
PTCD3-208ENST00000469585 IGFALSP35858 605 aa7.66□□□□□ -1.18
PTCD3-208ENST00000469585 MASP1P48740 699 aa7.66□□□□□ -1.18
PTCD3-208ENST00000469585 ERVFRD-1P60508 538 aa7.66□□□□□ -1.18
PTCD3-208ENST00000469585 RPS8P62241 208 aaKnown RBP7.66□□□□□ -1.18
PTCD3-208ENST00000469585 MROH9Q5TGP6 573 aa7.66□□□□□ -1.18
PTCD3-208ENST00000469585 BICRALQ6AI39 1079 aa7.66□□□□□ -1.18
PTCD3-208ENST00000469585 WWC2Q6AWC2 1192 aa7.66□□□□□ -1.18
PTCD3-208ENST00000469585 LRRTM3Q86VH5 581 aa7.66□□□□□ -1.18
PTCD3-208ENST00000469585 ZSWIM9Q86XI8 627 aa7.66□□□□□ -1.18
PTCD3-208ENST00000469585 USP33Q8TEY7 942 aa7.66□□□□□ -1.18
PTCD3-208ENST00000469585 INTS4Q96HW7 963 aaKnown RBP7.66□□□□□ -1.18
PTCD3-208ENST00000469585 JAM3Q9BX67 310 aa7.66□□□□□ -1.18
PTCD3-208ENST00000469585 VPS33BQ9H267 617 aa7.66□□□□□ -1.18
PTCD3-208ENST00000469585 NOB1Q9ULX3 412 aaKnown RBP7.66□□□□□ -1.18
PTCD3-208ENST00000469585 PRKAB1Q9Y478 270 aa7.66□□□□□ -1.18
PTCD3-208ENST00000469585 ATP6V0A2Q9Y487 856 aa7.66□□□□□ -1.18
PTCD3-208ENST00000469585 ADCY9O60503 1353 aa7.66□□□□□ -1.18
PTCD3-208ENST00000469585 ABCC12Q96J65 1359 aa7.66□□□□□ -1.18
PTCD3-208ENST00000469585 ABCC4O15439 1325 aa7.65□□□□□ -1.18
PTCD3-208ENST00000469585 OPA1O60313 960 aa7.65□□□□□ -1.18
PTCD3-208ENST00000469585 NTRK1P04629 796 aa7.65□□□□□ -1.18
PTCD3-208ENST00000469585 DBHP09172 617 aa7.65□□□□□ -1.18
PTCD3-208ENST00000469585 KCNA3P22001 575 aa7.65□□□□□ -1.18
PTCD3-208ENST00000469585 ARL4AP40617 200 aa7.65□□□□□ -1.18
PTCD3-208ENST00000469585 RARSP54136 660 aaKnown RBP7.65□□□□□ -1.18
PTCD3-208ENST00000469585 SF3B3Q15393 1217 aaKnown RBP7.65□□□□□ -1.18
PTCD3-208ENST00000469585 G2E3Q7L622 706 aa7.65□□□□□ -1.18
PTCD3-208ENST00000469585 ZC3H7AQ8IWR0 971 aaKnown RBP7.65□□□□□ -1.18
PTCD3-208ENST00000469585 SP8Q8IXZ3 490 aa7.65□□□□□ -1.18
PTCD3-208ENST00000469585 TRMT2AQ8IZ69 625 aaKnown RBP7.65□□□□□ -1.18
PTCD3-208ENST00000469585 PSMD1Q99460 953 aa7.65□□□□□ -1.18
PTCD3-208ENST00000469585 TARS2Q9BW92 718 aaKnown RBP7.65□□□□□ -1.18
PTCD3-208ENST00000469585 ANKRD2Q9GZV1 360 aa7.65□□□□□ -1.18
PTCD3-208ENST00000469585 EPB41L1Q9H4G0 881 aa7.65□□□□□ -1.18
PTCD3-208ENST00000469585 ARFGEF1Q9Y6D6 1849 aa7.65□□□□□ -1.18
PTCD3-208ENST00000469585 DLEC1Q9Y238 1755 aa7.64□□□□□ -1.19
PTCD3-208ENST00000469585 A0A1W2PQJ5 194 aa7.64□□□□□ -1.19
PTCD3-208ENST00000469585 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.64□□□□□ -1.19
PTCD3-208ENST00000469585 PPIP5K2O43314 1243 aa7.64□□□□□ -1.19
PTCD3-208ENST00000469585 SRGAP2CP0DJJ0 459 aa7.64□□□□□ -1.19
PTCD3-208ENST00000469585 JUNBP17275 347 aaPredicted RBP7.64□□□□□ -1.19
PTCD3-208ENST00000469585 POU3F2P20265 443 aaPredicted RBP7.64□□□□□ -1.19
PTCD3-208ENST00000469585 IARSP41252 1262 aaKnown RBP7.64□□□□□ -1.19
PTCD3-208ENST00000469585 KCNMB1Q16558 191 aa7.64□□□□□ -1.19
PTCD3-208ENST00000469585 HABP4Q5JVS0 413 aaKnown RBP7.64□□□□□ -1.19
PTCD3-208ENST00000469585 BEND3Q5T5X7 828 aa7.64□□□□□ -1.19
PTCD3-208ENST00000469585 ZCCHC8Q6NZY4 707 aaKnown RBP7.64□□□□□ -1.19
PTCD3-208ENST00000469585 ATF7IPQ6VMQ6 1270 aa7.64□□□□□ -1.19
PTCD3-208ENST00000469585 C16orf59Q7L2K0 433 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms