RNA–Protein interactions for RNA: ENST00000469504.1

COL4A3-204, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL4A3, Length 521 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-204ENST00000469504 LETM2Q2VYF4 491 aa12.31□□□□□ -0.44
COL4A3-204ENST00000469504 MTERF2Q49AM1 385 aa12.31□□□□□ -0.44
COL4A3-204ENST00000469504 TMEM184AQ6ZMB5 413 aa12.31□□□□□ -0.44
COL4A3-204ENST00000469504 SLFN12Q8IYM2 578 aa12.31□□□□□ -0.44
COL4A3-204ENST00000469504 SLC7A3Q8WY07 619 aa12.31□□□□□ -0.44
COL4A3-204ENST00000469504 KHSRPQ92945 711 aaKnown RBP eCLIP12.31□□□□□ -0.44
COL4A3-204ENST00000469504 ZNF558Q96NG5 402 aa12.31□□□□□ -0.44
COL4A3-204ENST00000469504 CASD1Q96PB1 797 aa12.31□□□□□ -0.44
COL4A3-204ENST00000469504 CEP89Q96ST8 783 aa12.31□□□□□ -0.44
COL4A3-204ENST00000469504 KCNH6Q9H252 994 aa12.31□□□□□ -0.44
COL4A3-204ENST00000469504 BRMS1Q9HCU9 246 aa12.31□□□□□ -0.44
COL4A3-204ENST00000469504 C11orf16Q9NQ32 467 aa12.31□□□□□ -0.44
COL4A3-204ENST00000469504 STK39Q9UEW8 545 aa12.31□□□□□ -0.44
COL4A3-204ENST00000469504 FARP1Q9Y4F1 1045 aaPredicted RBP12.31□□□□□ -0.44
COL4A3-204ENST00000469504 MYO7AQ13402 2215 aa12.3□□□□□ -0.44
COL4A3-204ENST00000469504 STBD1O95210 358 aa12.3□□□□□ -0.44
COL4A3-204ENST00000469504 ATF7P17544 494 aaPredicted RBP12.3□□□□□ -0.44
COL4A3-204ENST00000469504 IBSPP21815 317 aaPredicted RBP12.3□□□□□ -0.44
COL4A3-204ENST00000469504 RFC5P40937 340 aa12.3□□□□□ -0.44
COL4A3-204ENST00000469504 PCBP1Q15365 356 aaKnown RBP eCLIP12.3□□□□□ -0.44
COL4A3-204ENST00000469504 DUSP6Q16828 381 aa12.3□□□□□ -0.44
COL4A3-204ENST00000469504 KCNT2Q6UVM3 1135 aa12.3□□□□□ -0.44
COL4A3-204ENST00000469504 OTUD6AQ7L8S5 288 aa12.3□□□□□ -0.44
COL4A3-204ENST00000469504 ADGRD2Q7Z7M1 963 aa12.3□□□□□ -0.44
COL4A3-204ENST00000469504 ZNF598Q86UK7 904 aaKnown RBP12.3□□□□□ -0.44
COL4A3-204ENST00000469504 CYP26B1Q9NR63 512 aa12.3□□□□□ -0.44
COL4A3-204ENST00000469504 CLEC1BQ9P126 229 aa12.3□□□□□ -0.44
COL4A3-204ENST00000469504 SUCLA2Q9P2R7 463 aaPredicted RBP12.3□□□□□ -0.44
COL4A3-204ENST00000469504 EVPLQ92817 2033 aa12.29□□□□□ -0.44
COL4A3-204ENST00000469504 DDX11L8A8MPP1 907 aa12.29□□□□□ -0.44
COL4A3-204ENST00000469504 LINC01565O15544 149 aa12.29□□□□□ -0.44
COL4A3-204ENST00000469504 ASAP2O43150 1006 aa12.29□□□□□ -0.44
COL4A3-204ENST00000469504 SLC37A4O43826 429 aa12.29□□□□□ -0.44
COL4A3-204ENST00000469504 MARCH6O60337 910 aa12.29□□□□□ -0.44
COL4A3-204ENST00000469504 CCNT1O60563 726 aaKnown RBP12.29□□□□□ -0.44
COL4A3-204ENST00000469504 ZNF623O75123 536 aa12.29□□□□□ -0.44
COL4A3-204ENST00000469504 BAG4O95429 457 aaKnown RBP12.29□□□□□ -0.44
COL4A3-204ENST00000469504 HOXB8P17481 243 aaPredicted RBP12.29□□□□□ -0.44
COL4A3-204ENST00000469504 GTF2F1P35269 517 aaKnown RBP eCLIP12.29□□□□□ -0.44
COL4A3-204ENST00000469504 EPHA7Q15375 998 aa12.29□□□□□ -0.44
COL4A3-204ENST00000469504 HERC4Q5GLZ8 1057 aaPredicted RBP12.29□□□□□ -0.44
COL4A3-204ENST00000469504 ANO5Q75V66 913 aa12.29□□□□□ -0.44
COL4A3-204ENST00000469504 C4orf19Q8IY42 314 aa12.29□□□□□ -0.44
COL4A3-204ENST00000469504 TCP11Q8WWU5 503 aa12.29□□□□□ -0.44
COL4A3-204ENST00000469504 AIFM3Q96NN9 605 aa12.29□□□□□ -0.44
COL4A3-204ENST00000469504 TCF25Q9BQ70 676 aa12.29□□□□□ -0.44
COL4A3-204ENST00000469504 RNF19AQ9NV58 838 aa12.29□□□□□ -0.44
COL4A3-204ENST00000469504 SPG21Q9NZD8 308 aa12.29□□□□□ -0.44
COL4A3-204ENST00000469504 VAV3Q9UKW4 847 aa12.29□□□□□ -0.44
COL4A3-204ENST00000469504 TPCN1Q9ULQ1 816 aa12.29□□□□□ -0.44
COL4A3-204ENST00000469504 KCNJ14Q9UNX9 436 aa12.29□□□□□ -0.44
COL4A3-204ENST00000469504 FNDC1Q4ZHG4 1894 aaPredicted RBP12.29□□□□□ -0.44
COL4A3-204ENST00000469504 LOXHD1Q8IVV2 1947 aa12.29□□□□□ -0.44
COL4A3-204ENST00000469504 A0A087WZ62 844 aa12.28□□□□□ -0.44
COL4A3-204ENST00000469504 CSPG5O95196 566 aa12.28□□□□□ -0.44
COL4A3-204ENST00000469504 GLP2RO95838 553 aa12.28□□□□□ -0.44
COL4A3-204ENST00000469504 CD44P16070 742 aaKnown RBP12.28□□□□□ -0.44
COL4A3-204ENST00000469504 KRT2P35908 639 aa12.28□□□□□ -0.44
COL4A3-204ENST00000469504 PHKA2P46019 1235 aa12.28□□□□□ -0.44
COL4A3-204ENST00000469504 ALDH7A1P49419 539 aaKnown RBP12.28□□□□□ -0.44
COL4A3-204ENST00000469504 POLGP54098 1239 aaPredicted RBP12.28□□□□□ -0.44
COL4A3-204ENST00000469504 KCNC3Q14003 757 aa12.28□□□□□ -0.44
COL4A3-204ENST00000469504 GIT2Q14161 759 aa12.28□□□□□ -0.44
COL4A3-204ENST00000469504 CBX2Q14781 532 aaPredicted RBP12.28□□□□□ -0.44
COL4A3-204ENST00000469504 CLUL1Q15846 466 aa12.28□□□□□ -0.44
COL4A3-204ENST00000469504 CLLU1OSQ5K130 101 aa12.28□□□□□ -0.44
COL4A3-204ENST00000469504 TWF2Q6IBS0 349 aaKnown RBP12.28□□□□□ -0.44
COL4A3-204ENST00000469504 LRRC55Q6ZSA7 311 aa12.28□□□□□ -0.44
COL4A3-204ENST00000469504 PIK3AP1Q6ZUJ8 805 aa12.28□□□□□ -0.44
COL4A3-204ENST00000469504 SRGAP1Q7Z6B7 1085 aa12.28□□□□□ -0.44
COL4A3-204ENST00000469504 RBM23Q86U06 439 aaKnown RBP12.28□□□□□ -0.44
COL4A3-204ENST00000469504 RHPN2Q8IUC4 686 aa12.28□□□□□ -0.44
COL4A3-204ENST00000469504 SLC39A11Q8N1S5 342 aa12.28□□□□□ -0.44
COL4A3-204ENST00000469504 PSPC1Q8WXF1 523 aaKnown RBP12.28□□□□□ -0.44
COL4A3-204ENST00000469504 GJA10Q969M2 543 aa12.28□□□□□ -0.44
COL4A3-204ENST00000469504 PGBD4Q96DM1 585 aa12.28□□□□□ -0.44
COL4A3-204ENST00000469504 FDXACB1Q9BRP7 624 aaPredicted RBP12.28□□□□□ -0.44
COL4A3-204ENST00000469504 PHF7Q9BWX1 381 aaPredicted RBP12.28□□□□□ -0.44
COL4A3-204ENST00000469504 DHX33Q9H6R0 707 aaKnown RBP12.28□□□□□ -0.44
COL4A3-204ENST00000469504 ZSWIM4Q9H7M6 989 aa12.28□□□□□ -0.44
COL4A3-204ENST00000469504 ENTPD7Q9NQZ7 604 aa12.28□□□□□ -0.44
COL4A3-204ENST00000469504 PPP4R2Q9NY27 417 aa12.28□□□□□ -0.44
COL4A3-204ENST00000469504 ORC3Q9UBD5 711 aaPredicted RBP12.28□□□□□ -0.44
COL4A3-204ENST00000469504 PIN4Q9Y237 131 aaKnown RBP12.28□□□□□ -0.44
COL4A3-204ENST00000469504 KIAA1671Q9BY89 1806 aa12.27□□□□□ -0.44
COL4A3-204ENST00000469504 ATG2AQ2TAZ0 1938 aa12.27□□□□□ -0.44
COL4A3-204ENST00000469504 LOC730098B7Z3J9 87 aa12.27□□□□□ -0.45
COL4A3-204ENST00000469504 EML1O00423 815 aa12.27□□□□□ -0.45
COL4A3-204ENST00000469504 YWHABP31946 246 aaKnown RBP12.27□□□□□ -0.45
COL4A3-204ENST00000469504 ERVFC1P60507 584 aa12.27□□□□□ -0.45
COL4A3-204ENST00000469504 DRP2Q13474 957 aa12.27□□□□□ -0.45
COL4A3-204ENST00000469504 SMC1AQ14683 1233 aaKnown RBP12.27□□□□□ -0.45
COL4A3-204ENST00000469504 GLB1LQ6UWU2 654 aa12.27□□□□□ -0.45
COL4A3-204ENST00000469504 CATSPER4Q7RTX7 472 aa12.27□□□□□ -0.45
COL4A3-204ENST00000469504 TMC7Q7Z402 723 aa12.27□□□□□ -0.45
COL4A3-204ENST00000469504 RNF169Q8NCN4 708 aa12.27□□□□□ -0.45
COL4A3-204ENST00000469504 CNNM3Q8NE01 707 aa12.27□□□□□ -0.45
COL4A3-204ENST00000469504 SUSD6Q92537 303 aa12.27□□□□□ -0.45
COL4A3-204ENST00000469504 CASP10Q92851 521 aa12.27□□□□□ -0.45
COL4A3-204ENST00000469504 TMEM169Q96HH4 297 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms