RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 PRCPP42785 496 aa9.02□□□□□ -0.96
NPHP3-204ENST00000469232 NCKAP1LP55160 1127 aa9.02□□□□□ -0.96
NPHP3-204ENST00000469232 MCCD1P59942 119 aaPredicted RBP9.02□□□□□ -0.96
NPHP3-204ENST00000469232 ALCAMQ13740 583 aa9.02□□□□□ -0.96
NPHP3-204ENST00000469232 EMC2Q15006 297 aa9.02□□□□□ -0.96
NPHP3-204ENST00000469232 NFIL3Q16649 462 aa9.02□□□□□ -0.96
NPHP3-204ENST00000469232 ANO6Q4KMQ2 910 aa9.02□□□□□ -0.96
NPHP3-204ENST00000469232 IER5Q5VY09 327 aa9.02□□□□□ -0.96
NPHP3-204ENST00000469232 ZNF720Q7Z2F6 126 aa9.02□□□□□ -0.96
NPHP3-204ENST00000469232 SFR1Q86XK3 245 aa9.02□□□□□ -0.96
NPHP3-204ENST00000469232 SLC43A3Q8NBI5 491 aa9.02□□□□□ -0.96
NPHP3-204ENST00000469232 ENOX1Q8TC92 643 aaKnown RBP9.02□□□□□ -0.96
NPHP3-204ENST00000469232 ZNF507Q8TCN5 953 aa9.02□□□□□ -0.96
NPHP3-204ENST00000469232 HVCN1Q96D96 273 aa9.02□□□□□ -0.96
NPHP3-204ENST00000469232 MTG1Q9BT17 334 aaPredicted RBP9.02□□□□□ -0.96
NPHP3-204ENST00000469232 KATNAL1Q9BW62 490 aa9.02□□□□□ -0.96
NPHP3-204ENST00000469232 NFKBIZQ9BYH8 718 aa9.02□□□□□ -0.96
NPHP3-204ENST00000469232 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.02□□□□□ -0.96
NPHP3-204ENST00000469232 DNAJC25Q9H1X3 360 aa9.02□□□□□ -0.96
NPHP3-204ENST00000469232 SPC25Q9HBM1 224 aa9.02□□□□□ -0.96
NPHP3-204ENST00000469232 XPNPEP3Q9NQH7 507 aa9.02□□□□□ -0.96
NPHP3-204ENST00000469232 OGDHLQ9ULD0 1010 aa9.02□□□□□ -0.96
NPHP3-204ENST00000469232 GDAQ9Y2T3 454 aa9.02□□□□□ -0.96
NPHP3-204ENST00000469232 NRCAMQ92823 1304 aa9.02□□□□□ -0.97
NPHP3-204ENST00000469232 SIP14410 1827 aa9.02□□□□□ -0.97
NPHP3-204ENST00000469232 MOXD2PA6NHM9 499 aa9.02□□□□□ -0.97
NPHP3-204ENST00000469232 ZEB2O60315 1214 aa9.02□□□□□ -0.97
NPHP3-204ENST00000469232 USO1O60763 962 aaKnown RBP9.02□□□□□ -0.97
NPHP3-204ENST00000469232 FAM13AO94988 1023 aa9.02□□□□□ -0.97
NPHP3-204ENST00000469232 PGK1P00558 417 aa9.02□□□□□ -0.97
NPHP3-204ENST00000469232 HSPA1AP0DMV8 641 aaKnown RBP9.02□□□□□ -0.97
NPHP3-204ENST00000469232 HSPA1BP0DMV9 641 aaKnown RBP9.02□□□□□ -0.97
NPHP3-204ENST00000469232 ABCD1P33897 745 aa9.02□□□□□ -0.97
NPHP3-204ENST00000469232 ZNF165P49910 485 aa9.02□□□□□ -0.97
NPHP3-204ENST00000469232 GTF2BQ00403 316 aa9.02□□□□□ -0.97
NPHP3-204ENST00000469232 BEX3Q00994 111 aa9.02□□□□□ -0.97
NPHP3-204ENST00000469232 PTPN11Q06124 597 aaPredicted RBP9.02□□□□□ -0.97
NPHP3-204ENST00000469232 LRRC41Q15345 812 aa9.02□□□□□ -0.97
NPHP3-204ENST00000469232 PROX2Q3B8N5 592 aa9.02□□□□□ -0.97
NPHP3-204ENST00000469232 MTERF2Q49AM1 385 aa9.02□□□□□ -0.97
NPHP3-204ENST00000469232 HERC4Q5GLZ8 1057 aaPredicted RBP9.02□□□□□ -0.97
NPHP3-204ENST00000469232 GNASQ5JWF2 1037 aa9.02□□□□□ -0.97
NPHP3-204ENST00000469232 TTI2Q6NXR4 508 aa9.02□□□□□ -0.97
NPHP3-204ENST00000469232 RPAINQ86UA6 219 aa9.02□□□□□ -0.97
NPHP3-204ENST00000469232 DHX40Q8IX18 779 aaKnown RBP9.02□□□□□ -0.97
NPHP3-204ENST00000469232 PCSK9Q8NBP7 692 aaKnown RBP9.02□□□□□ -0.97
NPHP3-204ENST00000469232 KCNV2Q8TDN2 545 aa9.02□□□□□ -0.97
NPHP3-204ENST00000469232 SCFD1Q8WVM8 642 aa9.02□□□□□ -0.97
NPHP3-204ENST00000469232 SLC7A3Q8WY07 619 aa9.02□□□□□ -0.97
NPHP3-204ENST00000469232 BSNDQ8WZ55 320 aa9.02□□□□□ -0.97
NPHP3-204ENST00000469232 ZNF333Q96JL9 665 aa9.02□□□□□ -0.97
NPHP3-204ENST00000469232 SEZ6LQ9BYH1 1024 aa9.02□□□□□ -0.97
NPHP3-204ENST00000469232 FGFBP2Q9BYJ0 223 aa9.02□□□□□ -0.97
NPHP3-204ENST00000469232 RBSNQ9H1K0 784 aa9.02□□□□□ -0.97
NPHP3-204ENST00000469232 HSD3B7Q9H2F3 369 aa9.02□□□□□ -0.97
NPHP3-204ENST00000469232 KCTD10Q9H3F6 313 aa9.02□□□□□ -0.97
NPHP3-204ENST00000469232 CBX8Q9HC52 389 aa9.02□□□□□ -0.97
NPHP3-204ENST00000469232 PRDM10Q9NQV6 1147 aa9.02□□□□□ -0.97
NPHP3-204ENST00000469232 LARSQ9P2J5 1176 aaKnown RBP9.02□□□□□ -0.97
NPHP3-204ENST00000469232 ARHGAP28Q9P2N2 729 aa9.02□□□□□ -0.97
NPHP3-204ENST00000469232 DACH1Q9UI36 760 aa9.02□□□□□ -0.97
NPHP3-204ENST00000469232 RWDD2AQ9UIY3 292 aa9.02□□□□□ -0.97
NPHP3-204ENST00000469232 GRIN2DO15399 1336 aa9.01□□□□□ -0.97
NPHP3-204ENST00000469232 GRXCR2A6NFK2 248 aa9.01□□□□□ -0.97
NPHP3-204ENST00000469232 ASAP2O43150 1006 aa9.01□□□□□ -0.97
NPHP3-204ENST00000469232 TBCAO75347 108 aaKnown RBP9.01□□□□□ -0.97
NPHP3-204ENST00000469232 KRT18P05783 430 aaKnown RBP9.01□□□□□ -0.97
NPHP3-204ENST00000469232 C6orf222P0C671 652 aaPredicted RBP9.01□□□□□ -0.97
NPHP3-204ENST00000469232 SMIM10L2AP0DMW4 78 aa9.01□□□□□ -0.97
NPHP3-204ENST00000469232 SMIM10L2BP0DMW5 78 aa9.01□□□□□ -0.97
NPHP3-204ENST00000469232 IDEP14735 1019 aa9.01□□□□□ -0.97
NPHP3-204ENST00000469232 GLRA2P23416 452 aa9.01□□□□□ -0.97
NPHP3-204ENST00000469232 CCNE1P24864 410 aa9.01□□□□□ -0.97
NPHP3-204ENST00000469232 MARK3P27448 753 aa9.01□□□□□ -0.97
NPHP3-204ENST00000469232 NAMPTP43490 491 aa9.01□□□□□ -0.97
NPHP3-204ENST00000469232 NPTX2P47972 431 aa9.01□□□□□ -0.97
NPHP3-204ENST00000469232 CASP5P51878 434 aa9.01□□□□□ -0.97
NPHP3-204ENST00000469232 POLGP54098 1239 aaPredicted RBP9.01□□□□□ -0.97
NPHP3-204ENST00000469232 TBC1D8BQ0IIM8 1120 aa9.01□□□□□ -0.97
NPHP3-204ENST00000469232 HIC1Q14526 733 aa9.01□□□□□ -0.97
NPHP3-204ENST00000469232 GRIK4Q16099 956 aa9.01□□□□□ -0.97
NPHP3-204ENST00000469232 KIAA0753Q2KHM9 967 aa9.01□□□□□ -0.97
NPHP3-204ENST00000469232 UVSSAQ2YD98 709 aa9.01□□□□□ -0.97
NPHP3-204ENST00000469232 CDCA2Q69YH5 1023 aaPredicted RBP9.01□□□□□ -0.97
NPHP3-204ENST00000469232 MTHFD1LQ6UB35 978 aa9.01□□□□□ -0.97
NPHP3-204ENST00000469232 TMEM161BQ8NDZ6 487 aa9.01□□□□□ -0.97
NPHP3-204ENST00000469232 GLIS3Q8NEA6 775 aa9.01□□□□□ -0.97
NPHP3-204ENST00000469232 LMBR1Q8WVP7 490 aa9.01□□□□□ -0.97
NPHP3-204ENST00000469232 TCP11Q8WWU5 503 aa9.01□□□□□ -0.97
NPHP3-204ENST00000469232 HPS3Q969F9 1004 aa9.01□□□□□ -0.97
NPHP3-204ENST00000469232 SH2D3AQ9BRG2 576 aa9.01□□□□□ -0.97
NPHP3-204ENST00000469232 NAT10Q9H0A0 1025 aaKnown RBP9.01□□□□□ -0.97
NPHP3-204ENST00000469232 SEMA6BQ9H3T3 888 aa9.01□□□□□ -0.97
NPHP3-204ENST00000469232 GPRC5CQ9NQ84 441 aa9.01□□□□□ -0.97
NPHP3-204ENST00000469232 PHF24Q9UPV7 400 aa9.01□□□□□ -0.97
NPHP3-204ENST00000469232 MYH11P35749 1972 aa9□□□□□ -0.97
NPHP3-204ENST00000469232 SMIM35A0A1B0GVV1 85 aa9□□□□□ -0.97
NPHP3-204ENST00000469232 H0YCG3 227 aa9□□□□□ -0.97
NPHP3-204ENST00000469232 PIGRP01833 764 aa9□□□□□ -0.97
NPHP3-204ENST00000469232 ASGR1P07306 291 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms