RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 FAM117BQ6P1L5 589 aa10.72□□□□□ -0.69
NUP50-214ENST00000469163 SLC35F6Q8N357 371 aa10.72□□□□□ -0.69
NUP50-214ENST00000469163 ARHGEF38Q9NXL2 777 aa10.72□□□□□ -0.69
NUP50-214ENST00000469163 MAD2L2Q9UI95 211 aa10.72□□□□□ -0.69
NUP50-214ENST00000469163 ABT1Q9ULW3 272 aaKnown RBP10.72□□□□□ -0.69
NUP50-214ENST00000469163 TSC22D4Q9Y3Q8 395 aa10.72□□□□□ -0.69
NUP50-214ENST00000469163 ITIH6Q6UXX5 1313 aa10.72□□□□□ -0.69
NUP50-214ENST00000469163 ZC3H4Q9UPT8 1303 aaKnown RBP10.72□□□□□ -0.69
NUP50-214ENST00000469163 MKI67P46013 3256 aaKnown RBP10.72□□□□□ -0.69
NUP50-214ENST00000469163 CCDC166P0CW27 439 aa10.72□□□□□ -0.69
NUP50-214ENST00000469163 GNA11P29992 359 aa10.72□□□□□ -0.69
NUP50-214ENST00000469163 ZFYVE27Q5T4F4 411 aa10.72□□□□□ -0.69
NUP50-214ENST00000469163 C6orf183Q5T699 404 aa10.72□□□□□ -0.69
NUP50-214ENST00000469163 TMEM179Q6ZVK1 233 aa10.72□□□□□ -0.69
NUP50-214ENST00000469163 SGMS1Q86VZ5 419 aa10.72□□□□□ -0.69
NUP50-214ENST00000469163 FOXP4Q8IVH2 680 aaPredicted RBP10.72□□□□□ -0.69
NUP50-214ENST00000469163 CAGE1Q8TC20 777 aa10.72□□□□□ -0.69
NUP50-214ENST00000469163 KCNG4Q8TDN1 519 aa10.72□□□□□ -0.69
NUP50-214ENST00000469163 C7orf43Q8WVR3 580 aa10.72□□□□□ -0.69
NUP50-214ENST00000469163 SYMPKQ92797 1274 aaKnown RBP10.72□□□□□ -0.69
NUP50-214ENST00000469163 CAPZA3Q96KX2 299 aa10.72□□□□□ -0.69
NUP50-214ENST00000469163 CEP131Q9UPN4 1083 aa10.72□□□□□ -0.69
NUP50-214ENST00000469163 FAM205AQ6ZU69 1335 aa10.72□□□□□ -0.69
NUP50-214ENST00000469163 PENKP01210 267 aaPredicted RBP10.72□□□□□ -0.69
NUP50-214ENST00000469163 VIMP08670 466 aaKnown RBP10.72□□□□□ -0.69
NUP50-214ENST00000469163 SP100P23497 879 aaPredicted RBP10.72□□□□□ -0.69
NUP50-214ENST00000469163 NONOQ15233 471 aaKnown RBP eCLIP10.72□□□□□ -0.69
NUP50-214ENST00000469163 NTRK3Q16288 839 aa10.72□□□□□ -0.69
NUP50-214ENST00000469163 TTMPQ5BVD1 217 aa10.72□□□□□ -0.69
NUP50-214ENST00000469163 CFAP157Q5JU67 520 aa10.72□□□□□ -0.69
NUP50-214ENST00000469163 C6orf89Q6UWU4 347 aa10.72□□□□□ -0.69
NUP50-214ENST00000469163 CPLX4Q7Z7G2 160 aa10.72□□□□□ -0.69
NUP50-214ENST00000469163 EXOC3L1Q86VI1 746 aa10.72□□□□□ -0.69
NUP50-214ENST00000469163 MAP7D3Q8IWC1 876 aa10.72□□□□□ -0.69
NUP50-214ENST00000469163 LINC00301Q8NCQ3 95 aa10.72□□□□□ -0.69
NUP50-214ENST00000469163 CYP2W1Q8TAV3 490 aa10.72□□□□□ -0.69
NUP50-214ENST00000469163 NDEL1Q9GZM8 345 aa10.72□□□□□ -0.69
NUP50-214ENST00000469163 DRC3Q9H069 523 aa10.72□□□□□ -0.69
NUP50-214ENST00000469163 SFI1A8K8P3 1242 aa10.71□□□□□ -0.69
NUP50-214ENST00000469163 ATP9BO43861 1147 aa10.71□□□□□ -0.69
NUP50-214ENST00000469163 KRT14P02533 472 aa10.71□□□□□ -0.69
NUP50-214ENST00000469163 NR1D1P20393 614 aa10.71□□□□□ -0.69
NUP50-214ENST00000469163 CCND1P24385 295 aa10.71□□□□□ -0.69
NUP50-214ENST00000469163 PTGER2P43116 358 aa10.71□□□□□ -0.69
NUP50-214ENST00000469163 SARSP49591 514 aaKnown RBP10.71□□□□□ -0.69
NUP50-214ENST00000469163 PRELPP51888 382 aa10.71□□□□□ -0.69
NUP50-214ENST00000469163 LONRF3Q496Y0 759 aa10.71□□□□□ -0.69
NUP50-214ENST00000469163 NAPGQ99747 312 aaPredicted RBP10.71□□□□□ -0.69
NUP50-214ENST00000469163 RNF26Q9BY78 433 aaPredicted RBP10.71□□□□□ -0.69
NUP50-214ENST00000469163 IRF2BPLQ9H1B7 796 aa10.71□□□□□ -0.69
NUP50-214ENST00000469163 SYNCQ9H7C4 482 aa10.71□□□□□ -0.69
NUP50-214ENST00000469163 INTUQ9ULD6 942 aa10.71□□□□□ -0.69
NUP50-214ENST00000469163 TMED5Q9Y3A6 229 aa10.71□□□□□ -0.69
NUP50-214ENST00000469163 HTR3EA5X5Y0 456 aa10.71□□□□□ -0.69
NUP50-214ENST00000469163 ORC4O43929 436 aa10.71□□□□□ -0.69
NUP50-214ENST00000469163 DDAH1O94760 285 aa10.71□□□□□ -0.69
NUP50-214ENST00000469163 PYGMP11217 842 aa10.71□□□□□ -0.69
NUP50-214ENST00000469163 IL4RP24394 825 aa10.71□□□□□ -0.69
NUP50-214ENST00000469163 ASIC1P78348 528 aa10.71□□□□□ -0.69
NUP50-214ENST00000469163 GUCY2DQ02846 1103 aa10.71□□□□□ -0.69
NUP50-214ENST00000469163 MTF1Q14872 753 aa10.71□□□□□ -0.69
NUP50-214ENST00000469163 DPCR1Q3MIW9 517 aa10.71□□□□□ -0.69
NUP50-214ENST00000469163 ODF2Q5BJF6 829 aa10.71□□□□□ -0.69
NUP50-214ENST00000469163 CCSAPQ6IQ19 270 aaPredicted RBP10.71□□□□□ -0.69
NUP50-214ENST00000469163 ANKRD35Q8N283 1001 aa10.71□□□□□ -0.69
NUP50-214ENST00000469163 DEPTORQ8TB45 409 aa10.71□□□□□ -0.69
NUP50-214ENST00000469163 BPIFA3Q9BQP9 254 aa10.71□□□□□ -0.69
NUP50-214ENST00000469163 SCOCQ9UIL1 159 aa10.71□□□□□ -0.69
NUP50-214ENST00000469163 BOLA2-SMG1P6H3BVE0 249 aa10.71□□□□□ -0.7
NUP50-214ENST00000469163 CBFA2T2O43439 604 aa10.71□□□□□ -0.7
NUP50-214ENST00000469163 DNAJC8O75937 253 aaPredicted RBP10.71□□□□□ -0.7
NUP50-214ENST00000469163 ASNSP08243 561 aa10.71□□□□□ -0.7
NUP50-214ENST00000469163 BCRP11274 1271 aa10.71□□□□□ -0.7
NUP50-214ENST00000469163 USP14P54578 494 aa10.71□□□□□ -0.7
NUP50-214ENST00000469163 MTTPP55157 894 aa10.71□□□□□ -0.7
NUP50-214ENST00000469163 FAM133BQ5BKY9 247 aaKnown RBP10.71□□□□□ -0.7
NUP50-214ENST00000469163 RILPL1Q5EBL4 403 aa10.71□□□□□ -0.7
NUP50-214ENST00000469163 UBE2Q1Q7Z7E8 422 aa10.71□□□□□ -0.7
NUP50-214ENST00000469163 ZNF554Q86TJ5 538 aa10.71□□□□□ -0.7
NUP50-214ENST00000469163 TPH2Q8IWU9 490 aa10.71□□□□□ -0.7
NUP50-214ENST00000469163 RPAP3Q9H6T3 665 aaPredicted RBP10.71□□□□□ -0.7
NUP50-214ENST00000469163 JMJD4Q9H9V9 463 aa10.71□□□□□ -0.7
NUP50-214ENST00000469163 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.71□□□□□ -0.7
NUP50-214ENST00000469163 CD2APQ9Y5K6 639 aa10.71□□□□□ -0.7
NUP50-214ENST00000469163 MYH13Q9UKX3 1938 aa10.71□□□□□ -0.7
NUP50-214ENST00000469163 BDNFP23560 247 aa10.7□□□□□ -0.7
NUP50-214ENST00000469163 CCNFP41002 786 aa10.7□□□□□ -0.7
NUP50-214ENST00000469163 LRP8Q14114 963 aa10.7□□□□□ -0.7
NUP50-214ENST00000469163 CLPPQ16740 277 aaPredicted RBP10.7□□□□□ -0.7
NUP50-214ENST00000469163 APLFQ8IW19 511 aaPredicted RBP10.7□□□□□ -0.7
NUP50-214ENST00000469163 SLC7A5P1Q8MH63 180 aa10.7□□□□□ -0.7
NUP50-214ENST00000469163 FAM151AQ8WW52 585 aa10.7□□□□□ -0.7
NUP50-214ENST00000469163 LZICQ8WZA0 190 aa10.7□□□□□ -0.7
NUP50-214ENST00000469163 SEC16BQ96JE7 1060 aa10.7□□□□□ -0.7
NUP50-214ENST00000469163 NMRK2Q9NPI5 230 aa10.7□□□□□ -0.7
NUP50-214ENST00000469163 PLCB1Q9NQ66 1216 aa10.7□□□□□ -0.7
NUP50-214ENST00000469163 RASAL2Q9UJF2 1139 aa10.7□□□□□ -0.7
NUP50-214ENST00000469163 LAMA2P24043 3122 aaKnown RBP10.7□□□□□ -0.7
NUP50-214ENST00000469163 SPTLC1O15269 473 aa10.7□□□□□ -0.7
NUP50-214ENST00000469163 MCL1Q07820 350 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms