RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 BTBD2Q9BX70 525 aa6.86□□□□□ -1.31
LSM5-209ENST00000468872 AMNQ9BXJ7 453 aa6.86□□□□□ -1.31
LSM5-209ENST00000468872 ZDHHC5Q9C0B5 715 aa6.86□□□□□ -1.31
LSM5-209ENST00000468872 TOPORSQ9NS56 1045 aaPredicted RBP6.86□□□□□ -1.31
LSM5-209ENST00000468872 C14orf119Q9NWQ9 140 aa6.86□□□□□ -1.31
LSM5-209ENST00000468872 UCKL1Q9NWZ5 548 aa6.86□□□□□ -1.31
LSM5-209ENST00000468872 FBXO10Q9UK96 956 aa6.86□□□□□ -1.31
LSM5-209ENST00000468872 ZFR2Q9UPR6 939 aaKnown RBP6.86□□□□□ -1.31
LSM5-209ENST00000468872 MUSKO15146 869 aa6.85□□□□□ -1.31
LSM5-209ENST00000468872 MMEP08473 750 aa6.85□□□□□ -1.31
LSM5-209ENST00000468872 IARSP41252 1262 aaKnown RBP6.85□□□□□ -1.31
LSM5-209ENST00000468872 RAC3P60763 192 aa6.85□□□□□ -1.31
LSM5-209ENST00000468872 LRRC32Q14392 662 aa6.85□□□□□ -1.31
LSM5-209ENST00000468872 CMIPQ8IY22 773 aa6.85□□□□□ -1.31
LSM5-209ENST00000468872 GIMAP8Q8ND71 665 aaPredicted RBP6.85□□□□□ -1.31
LSM5-209ENST00000468872 ASB15Q8WXK1 588 aa6.85□□□□□ -1.31
LSM5-209ENST00000468872 C16orf92Q96LL3 132 aa6.85□□□□□ -1.31
LSM5-209ENST00000468872 FOXP2O15409 715 aa6.84□□□□□ -1.31
LSM5-209ENST00000468872 HMGCRP04035 888 aa6.84□□□□□ -1.31
LSM5-209ENST00000468872 CD40P25942 277 aa6.84□□□□□ -1.31
LSM5-209ENST00000468872 ECE1P42892 770 aa6.84□□□□□ -1.31
LSM5-209ENST00000468872 FNTBP49356 437 aa6.84□□□□□ -1.31
LSM5-209ENST00000468872 KCNQ1P51787 676 aa6.84□□□□□ -1.31
LSM5-209ENST00000468872 KLF1Q13351 362 aaPredicted RBP6.84□□□□□ -1.31
LSM5-209ENST00000468872 EPHA7Q15375 998 aa6.84□□□□□ -1.31
LSM5-209ENST00000468872 NFE2Q16621 373 aaPredicted RBP6.84□□□□□ -1.31
LSM5-209ENST00000468872 ZMAT1Q5H9K5 638 aa6.84□□□□□ -1.31
LSM5-209ENST00000468872 LRSAM1Q6UWE0 723 aa6.84□□□□□ -1.31
LSM5-209ENST00000468872 FMNL3Q8IVF7 1028 aa6.84□□□□□ -1.31
LSM5-209ENST00000468872 RTF1Q92541 710 aaKnown RBP6.84□□□□□ -1.31
LSM5-209ENST00000468872 CHMP4CQ96CF2 233 aa6.84□□□□□ -1.31
LSM5-209ENST00000468872 SEMA4AQ9H3S1 761 aa6.84□□□□□ -1.31
LSM5-209ENST00000468872 OAZ3Q9UMX2 235 aa6.84□□□□□ -1.31
LSM5-209ENST00000468872 NOC2LQ9Y3T9 749 aaKnown RBP6.84□□□□□ -1.31
LSM5-209ENST00000468872 SPEF1Q9Y4P9 236 aa6.84□□□□□ -1.31
LSM5-209ENST00000468872 FZD9O00144 591 aa6.83□□□□□ -1.32
LSM5-209ENST00000468872 AKAP8O43823 692 aaKnown RBP6.83□□□□□ -1.32
LSM5-209ENST00000468872 MT-CO1P00395 513 aa6.83□□□□□ -1.32
LSM5-209ENST00000468872 RAB27AP51159 221 aa6.83□□□□□ -1.32
LSM5-209ENST00000468872 CD83Q01151 205 aa6.83□□□□□ -1.32
LSM5-209ENST00000468872 NOLC1Q14978 699 aaKnown RBP eCLIP6.83□□□□□ -1.32
LSM5-209ENST00000468872 EIF4HQ15056 248 aaKnown RBP6.83□□□□□ -1.32
LSM5-209ENST00000468872 PDCD1Q15116 288 aa6.83□□□□□ -1.32
LSM5-209ENST00000468872 SPDYAQ5MJ70 313 aa6.83□□□□□ -1.32
LSM5-209ENST00000468872 KANK2Q63ZY3 851 aa6.83□□□□□ -1.32
LSM5-209ENST00000468872 LARP4Q71RC2 724 aaKnown RBP eCLIP6.83□□□□□ -1.324e-10■□□□□ 10.7
LSM5-209ENST00000468872 OTOP2Q7RTS6 562 aa6.83□□□□□ -1.32
LSM5-209ENST00000468872 ZBTB46Q86UZ6 589 aa6.83□□□□□ -1.32
LSM5-209ENST00000468872 KIAA1683Q9H0B3 1180 aa6.83□□□□□ -1.32
LSM5-209ENST00000468872 OR10A5Q9H207 317 aa6.83□□□□□ -1.32
LSM5-209ENST00000468872 TCEAL9Q9UHQ7 104 aa6.83□□□□□ -1.32
LSM5-209ENST00000468872 CDC42EP3Q9UKI2 254 aa6.83□□□□□ -1.32
LSM5-209ENST00000468872 NR2E1Q9Y466 385 aa6.83□□□□□ -1.32
LSM5-209ENST00000468872 TESMINQ9Y4I5 508 aa6.83□□□□□ -1.32
LSM5-209ENST00000468872 SHTN1A0MZ66 631 aa6.82□□□□□ -1.32
LSM5-209ENST00000468872 AKAP10O43572 662 aa6.82□□□□□ -1.32
LSM5-209ENST00000468872 KDM1AO60341 852 aa6.82□□□□□ -1.32
LSM5-209ENST00000468872 MYBL2P10244 700 aa6.82□□□□□ -1.32
LSM5-209ENST00000468872 C6P13671 934 aa6.82□□□□□ -1.32
LSM5-209ENST00000468872 CR2P20023 1033 aa6.82□□□□□ -1.32
LSM5-209ENST00000468872 SCAND1P57086 179 aa6.82□□□□□ -1.32
LSM5-209ENST00000468872 LRRC41Q15345 812 aa6.82□□□□□ -1.32
LSM5-209ENST00000468872 TBR1Q16650 682 aa6.82□□□□□ -1.32
LSM5-209ENST00000468872 PTPN21Q16825 1174 aa6.82□□□□□ -1.32
LSM5-209ENST00000468872 HS1BP3Q53T59 392 aa6.82□□□□□ -1.32
LSM5-209ENST00000468872 ZZZ3Q8IYH5 903 aa6.82□□□□□ -1.32
LSM5-209ENST00000468872 FUKQ8N0W3 1084 aa6.82□□□□□ -1.32
LSM5-209ENST00000468872 HIPK4Q8NE63 616 aa6.82□□□□□ -1.32
LSM5-209ENST00000468872 WDR48Q8TAF3 677 aa6.82□□□□□ -1.32
LSM5-209ENST00000468872 LMBR1Q8WVP7 490 aa6.82□□□□□ -1.32
LSM5-209ENST00000468872 FOXRED1Q96CU9 486 aaPredicted RBP6.82□□□□□ -1.32
LSM5-209ENST00000468872 HOOK2Q96ED9 719 aa6.82□□□□□ -1.32
LSM5-209ENST00000468872 FUBP3Q96I24 572 aaKnown RBP eCLIP6.82□□□□□ -1.325e-8■■■□□ 17.6
LSM5-209ENST00000468872 ZNF496Q96IT1 587 aaPredicted RBP6.82□□□□□ -1.32
LSM5-209ENST00000468872 GBP4Q96PP9 640 aa6.82□□□□□ -1.32
LSM5-209ENST00000468872 DPYSL5Q9BPU6 564 aa6.82□□□□□ -1.32
LSM5-209ENST00000468872 AASDHPPTQ9NRN7 309 aa6.82□□□□□ -1.32
LSM5-209ENST00000468872 WASHC2AQ641Q2 1341 aa6.81□□□□□ -1.32
LSM5-209ENST00000468872 A0A0G2JNJ9 132 aa6.81□□□□□ -1.32
LSM5-209ENST00000468872 PRAMEF22A3QJZ6 481 aa6.81□□□□□ -1.32
LSM5-209ENST00000468872 MATN2O00339 956 aa6.81□□□□□ -1.32
LSM5-209ENST00000468872 FSHBP01225 129 aa6.81□□□□□ -1.32
LSM5-209ENST00000468872 TACR2P21452 398 aa6.81□□□□□ -1.32
LSM5-209ENST00000468872 NFYCQ13952 458 aa6.81□□□□□ -1.32
LSM5-209ENST00000468872 PPP2R5AQ15172 486 aa6.81□□□□□ -1.32
LSM5-209ENST00000468872 TMEM200BQ69YZ2 307 aa6.81□□□□□ -1.32
LSM5-209ENST00000468872 TRIM68Q6AZZ1 485 aa6.81□□□□□ -1.32
LSM5-209ENST00000468872 CRIP3Q6Q6R5 217 aa6.81□□□□□ -1.32
LSM5-209ENST00000468872 FRMD7Q6ZUT3 714 aa6.81□□□□□ -1.32
LSM5-209ENST00000468872 RTN4RL1Q86UN2 441 aaPredicted RBP6.81□□□□□ -1.32
LSM5-209ENST00000468872 C1orf162Q8NEQ5 155 aaPredicted RBP6.81□□□□□ -1.32
LSM5-209ENST00000468872 ERCC4Q92889 916 aaPredicted RBP6.81□□□□□ -1.32
LSM5-209ENST00000468872 TSR2Q969E8 191 aaKnown RBP6.81□□□□□ -1.32
LSM5-209ENST00000468872 RTFDC1Q9BY42 306 aaPredicted RBP6.81□□□□□ -1.32
LSM5-209ENST00000468872 Q9UFV3 132 aa6.81□□□□□ -1.32
LSM5-209ENST00000468872 MSRAQ9UJ68 235 aa6.81□□□□□ -1.32
LSM5-209ENST00000468872 ASB1Q9Y576 335 aa6.81□□□□□ -1.32
LSM5-209ENST00000468872 GOLGA8AA7E2F4 631 aa6.8□□□□□ -1.32
LSM5-209ENST00000468872 GOLGA8BA8MQT2 603 aa6.8□□□□□ -1.32
LSM5-209ENST00000468872 ARHGAP6O43182 974 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 136.4 ms