RNA–Protein interactions for RNA: ENST00000468676.5

TMEM39A-205, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-205ENST00000468676 MYOGP15173 224 aa16.42■□□□□ 0.22
TMEM39A-205ENST00000468676 NASPP49321 788 aaPredicted RBP16.42■□□□□ 0.22
TMEM39A-205ENST00000468676 SARSP49591 514 aaKnown RBP16.42■□□□□ 0.22
TMEM39A-205ENST00000468676 CEBPZQ03701 1054 aaKnown RBP16.42■□□□□ 0.22
TMEM39A-205ENST00000468676 DSC3Q14574 896 aa16.42■□□□□ 0.22
TMEM39A-205ENST00000468676 ZRSR1Q15695 479 aaKnown RBP16.42■□□□□ 0.22
TMEM39A-205ENST00000468676 FAM117BQ6P1L5 589 aa16.42■□□□□ 0.22
TMEM39A-205ENST00000468676 Q7L0L9 218 aa16.42■□□□□ 0.22
TMEM39A-205ENST00000468676 IFNLR1Q8IU57 520 aaPredicted RBP16.42■□□□□ 0.22
TMEM39A-205ENST00000468676 RNF149Q8NC42 400 aa16.42■□□□□ 0.22
TMEM39A-205ENST00000468676 LINC01599Q8WXQ3 324 aa16.42■□□□□ 0.22
TMEM39A-205ENST00000468676 YME1L1Q96TA2 773 aa16.42■□□□□ 0.22
TMEM39A-205ENST00000468676 NFKBIZQ9BYH8 718 aa16.42■□□□□ 0.22
TMEM39A-205ENST00000468676 POLR3FQ9H1D9 316 aaPredicted RBP16.42■□□□□ 0.22
TMEM39A-205ENST00000468676 TTYH1Q9H313 450 aaPredicted RBP16.42■□□□□ 0.22
TMEM39A-205ENST00000468676 DACT1Q9NYF0 836 aa16.42■□□□□ 0.22
TMEM39A-205ENST00000468676 MYH15Q9Y2K3 1946 aa16.42■□□□□ 0.22
TMEM39A-205ENST00000468676 MARCKSP29966 332 aaPredicted RBP16.41■□□□□ 0.22
TMEM39A-205ENST00000468676 PTENP60484 403 aa16.41■□□□□ 0.22
TMEM39A-205ENST00000468676 FAM189BP81408 668 aa16.41■□□□□ 0.22
TMEM39A-205ENST00000468676 NCBP1Q09161 790 aaKnown RBP16.41■□□□□ 0.22
TMEM39A-205ENST00000468676 STK38Q15208 465 aa16.41■□□□□ 0.22
TMEM39A-205ENST00000468676 FAM102BQ5T8I3 360 aa16.41■□□□□ 0.22
TMEM39A-205ENST00000468676 CATSPER4Q7RTX7 472 aa16.41■□□□□ 0.22
TMEM39A-205ENST00000468676 TMCO2Q7Z6W1 182 aaPredicted RBP16.41■□□□□ 0.22
TMEM39A-205ENST00000468676 KRI1Q8N9T8 703 aaKnown RBP16.41■□□□□ 0.22
TMEM39A-205ENST00000468676 KIFAP3Q92845 792 aa16.41■□□□□ 0.22
TMEM39A-205ENST00000468676 TIPINQ9BVW5 301 aa16.41■□□□□ 0.22
TMEM39A-205ENST00000468676 CCSER1Q9C0I3 900 aa16.41■□□□□ 0.22
TMEM39A-205ENST00000468676 FBXO2Q9UK22 296 aaPredicted RBP16.41■□□□□ 0.22
TMEM39A-205ENST00000468676 LRFN2Q9ULH4 789 aa16.41■□□□□ 0.22
TMEM39A-205ENST00000468676 C9IYK1 514 aa16.4■□□□□ 0.22
TMEM39A-205ENST00000468676 E9PMD0 336 aa16.4■□□□□ 0.22
TMEM39A-205ENST00000468676 MGEA5O60502 916 aa16.4■□□□□ 0.22
TMEM39A-205ENST00000468676 YEATS4O95619 227 aa16.4■□□□□ 0.22
TMEM39A-205ENST00000468676 SKIP12755 728 aa16.4■□□□□ 0.22
TMEM39A-205ENST00000468676 GLRA2P23416 452 aa16.4■□□□□ 0.22
TMEM39A-205ENST00000468676 TXLNAP40222 546 aa16.4■□□□□ 0.22
TMEM39A-205ENST00000468676 TAP1Q03518 808 aa16.4■□□□□ 0.22
TMEM39A-205ENST00000468676 GRB10Q13322 594 aa16.4■□□□□ 0.22
TMEM39A-205ENST00000468676 PPP2R5AQ15172 486 aa16.4■□□□□ 0.22
TMEM39A-205ENST00000468676 TMEM119Q4V9L6 283 aa16.4■□□□□ 0.22
TMEM39A-205ENST00000468676 FOXD4L5Q5VV16 416 aaPredicted RBP16.4■□□□□ 0.22
TMEM39A-205ENST00000468676 CRIPAKQ8N1N5 446 aa16.4■□□□□ 0.22
TMEM39A-205ENST00000468676 LINC00301Q8NCQ3 95 aa16.4■□□□□ 0.22
TMEM39A-205ENST00000468676 RASSF8Q8NHQ8 419 aa16.4■□□□□ 0.22
TMEM39A-205ENST00000468676 SP7Q8TDD2 431 aaPredicted RBP16.4■□□□□ 0.22
TMEM39A-205ENST00000468676 ASAP3Q8TDY4 903 aa16.4■□□□□ 0.22
TMEM39A-205ENST00000468676 FOXD4L4Q8WXT5 416 aaPredicted RBP16.4■□□□□ 0.22
TMEM39A-205ENST00000468676 PNMA5Q96PV4 448 aa16.4■□□□□ 0.22
TMEM39A-205ENST00000468676 TRAIPQ9BWF2 469 aa16.4■□□□□ 0.22
TMEM39A-205ENST00000468676 CSRNP2Q9H175 543 aa16.4■□□□□ 0.22
TMEM39A-205ENST00000468676 ELAC1Q9H777 363 aaKnown RBP16.4■□□□□ 0.22
TMEM39A-205ENST00000468676 KCND2Q9NZV8 630 aa16.4■□□□□ 0.22
TMEM39A-205ENST00000468676 CFAP45Q9UL16 551 aa16.4■□□□□ 0.22
TMEM39A-205ENST00000468676 PCDHB7Q9Y5E2 793 aa16.4■□□□□ 0.22
TMEM39A-205ENST00000468676 SPTLC2O15270 562 aa16.39■□□□□ 0.21
TMEM39A-205ENST00000468676 PPP6R2O75170 966 aa16.39■□□□□ 0.21
TMEM39A-205ENST00000468676 CSDE1O75534 798 aaKnown RBP16.39■□□□□ 0.21
TMEM39A-205ENST00000468676 AXLP30530 894 aa16.39■□□□□ 0.21
TMEM39A-205ENST00000468676 CAPSQ13938 189 aa16.39■□□□□ 0.21
TMEM39A-205ENST00000468676 MAEAQ7L5Y9 396 aa16.39■□□□□ 0.21
TMEM39A-205ENST00000468676 SYT2Q8N9I0 419 aaPredicted RBP16.39■□□□□ 0.21
TMEM39A-205ENST00000468676 IFT74Q96LB3 600 aa16.39■□□□□ 0.21
TMEM39A-205ENST00000468676 FAM161BQ96MY7 647 aa16.39■□□□□ 0.21
TMEM39A-205ENST00000468676 C2orf40Q9H1Z8 148 aa16.39■□□□□ 0.21
TMEM39A-205ENST00000468676 GPRC5CQ9NQ84 441 aa16.39■□□□□ 0.21
TMEM39A-205ENST00000468676 AGPAT5Q9NUQ2 364 aa16.39■□□□□ 0.21
TMEM39A-205ENST00000468676 TMEM161AQ9NX61 479 aa16.39■□□□□ 0.21
TMEM39A-205ENST00000468676 TFIP11Q9UBB9 837 aaKnown RBP16.39■□□□□ 0.21
TMEM39A-205ENST00000468676 DAXXQ9UER7 740 aaPredicted RBP16.39■□□□□ 0.21
TMEM39A-205ENST00000468676 CCDC39Q9UFE4 941 aa16.39■□□□□ 0.21
TMEM39A-205ENST00000468676 KCNG1Q9UIX4 513 aa16.39■□□□□ 0.21
TMEM39A-205ENST00000468676 CHD7Q9P2D1 2997 aa16.39■□□□□ 0.21
TMEM39A-205ENST00000468676 COL4A6Q14031 1691 aa16.39■□□□□ 0.21
TMEM39A-205ENST00000468676 A0A0U1RQF3 1178 aa16.38■□□□□ 0.21
TMEM39A-205ENST00000468676 LINC01553A4QN01 128 aa16.38■□□□□ 0.21
TMEM39A-205ENST00000468676 LRRIQ4A6NIV6 560 aa16.38■□□□□ 0.21
TMEM39A-205ENST00000468676 HOXA2O43364 376 aa16.38■□□□□ 0.21
TMEM39A-205ENST00000468676 DGKIO75912 1065 aa16.38■□□□□ 0.21
TMEM39A-205ENST00000468676 ERLIN2O94905 339 aa16.38■□□□□ 0.21
TMEM39A-205ENST00000468676 BRD1O95696 1058 aa16.38■□□□□ 0.21
TMEM39A-205ENST00000468676 EOMESO95936 686 aa16.38■□□□□ 0.21
TMEM39A-205ENST00000468676 PLA2G4BP0C869 781 aa16.38■□□□□ 0.21
TMEM39A-205ENST00000468676 FGFR4P22455 802 aa16.38■□□□□ 0.21
TMEM39A-205ENST00000468676 GUCY2CP25092 1073 aa16.38■□□□□ 0.21
TMEM39A-205ENST00000468676 NAMPTP43490 491 aa16.38■□□□□ 0.21
TMEM39A-205ENST00000468676 GRIN1Q05586 938 aa16.38■□□□□ 0.21
TMEM39A-205ENST00000468676 PKP1Q13835 747 aa16.38■□□□□ 0.21
TMEM39A-205ENST00000468676 RINT1Q6NUQ1 792 aa16.38■□□□□ 0.21
TMEM39A-205ENST00000468676 C1orf186Q6ZWK4 172 aa16.38■□□□□ 0.21
TMEM39A-205ENST00000468676 KCNK18Q7Z418 384 aa16.38■□□□□ 0.21
TMEM39A-205ENST00000468676 ZBTB8OSQ8IWT0 167 aa16.38■□□□□ 0.21
TMEM39A-205ENST00000468676 KCNG4Q8TDN1 519 aa16.38■□□□□ 0.21
TMEM39A-205ENST00000468676 ZNF689Q96CS4 500 aaPredicted RBP16.38■□□□□ 0.21
TMEM39A-205ENST00000468676 DRC1Q96MC2 740 aa16.38■□□□□ 0.21
TMEM39A-205ENST00000468676 SAMD11Q96NU1 681 aa16.38■□□□□ 0.21
TMEM39A-205ENST00000468676 TGS1Q96RS0 853 aaKnown RBP16.38■□□□□ 0.21
TMEM39A-205ENST00000468676 C17orf75Q9HAS0 396 aa16.38■□□□□ 0.21
TMEM39A-205ENST00000468676 PIN4Q9Y237 131 aaKnown RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms