RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 LCE1DQ5T752 114 aa4.55□□□□□ -1.68
HMGB1P25-201ENST00000468402 SLFN12LQ6IEE8 588 aa4.55□□□□□ -1.68
HMGB1P25-201ENST00000468402 CYP4F22Q6NT55 531 aa4.55□□□□□ -1.68
HMGB1P25-201ENST00000468402 INTS5Q6P9B9 1019 aaKnown RBP4.55□□□□□ -1.68
HMGB1P25-201ENST00000468402 SPPL2CQ8IUH8 684 aa4.55□□□□□ -1.68
HMGB1P25-201ENST00000468402 NRG4Q8WWG1 115 aa4.55□□□□□ -1.68
HMGB1P25-201ENST00000468402 SEC14L1Q92503 715 aa4.55□□□□□ -1.68
HMGB1P25-201ENST00000468402 DPF2Q92785 391 aa4.55□□□□□ -1.68
HMGB1P25-201ENST00000468402 ASIC4Q96FT7 647 aa4.55□□□□□ -1.68
HMGB1P25-201ENST00000468402 MAML3Q96JK9 1138 aa4.55□□□□□ -1.68
HMGB1P25-201ENST00000468402 CGRRF1Q99675 332 aa4.55□□□□□ -1.68
HMGB1P25-201ENST00000468402 SELENOOQ9BVL4 669 aa4.55□□□□□ -1.68
HMGB1P25-201ENST00000468402 SSBP4Q9BWG4 385 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P25-201ENST00000468402 TMX4Q9H1E5 349 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P25-201ENST00000468402 NUP62CLQ9H1M0 184 aa4.55□□□□□ -1.68
HMGB1P25-201ENST00000468402 ARMT1Q9H993 441 aa4.55□□□□□ -1.68
HMGB1P25-201ENST00000468402 RC3H2Q9HBD1 1191 aaKnown RBP4.55□□□□□ -1.68
HMGB1P25-201ENST00000468402 LUZP4Q9P127 313 aa4.55□□□□□ -1.68
HMGB1P25-201ENST00000468402 FNIP2Q9P278 1114 aa4.55□□□□□ -1.68
HMGB1P25-201ENST00000468402 ANAPC4Q9UJX5 808 aa4.55□□□□□ -1.68
HMGB1P25-201ENST00000468402 NUDT5Q9UKK9 219 aa4.55□□□□□ -1.68
HMGB1P25-201ENST00000468402 LIMCH1Q9UPQ0 1083 aa4.55□□□□□ -1.68
HMGB1P25-201ENST00000468402 NUMBLQ9Y6R0 609 aa4.55□□□□□ -1.68
HMGB1P25-201ENST00000468402 GOLGA6L22H0YM25 854 aa4.54□□□□□ -1.68
HMGB1P25-201ENST00000468402 MAFGO15525 162 aa4.54□□□□□ -1.68
HMGB1P25-201ENST00000468402 PIP5K1CO60331 668 aa4.54□□□□□ -1.68
HMGB1P25-201ENST00000468402 RPLP2P05387 115 aaKnown RBP4.54□□□□□ -1.68
HMGB1P25-201ENST00000468402 XPAP23025 273 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P25-201ENST00000468402 HERVK_113P62684 666 aa4.54□□□□□ -1.68
HMGB1P25-201ENST00000468402 BTKQ06187 659 aa4.54□□□□□ -1.68
HMGB1P25-201ENST00000468402 MOGSQ13724 837 aa4.54□□□□□ -1.68
HMGB1P25-201ENST00000468402 TRIM25Q14258 630 aaKnown RBP4.54□□□□□ -1.68
HMGB1P25-201ENST00000468402 KIR3DS1Q14943 382 aa4.54□□□□□ -1.68
HMGB1P25-201ENST00000468402 ANO6Q4KMQ2 910 aa4.54□□□□□ -1.68
HMGB1P25-201ENST00000468402 MUM1L1Q5H9M0 696 aa4.54□□□□□ -1.68
HMGB1P25-201ENST00000468402 EMC4Q5J8M3 183 aa4.54□□□□□ -1.68
HMGB1P25-201ENST00000468402 SPTY2D1Q68D10 685 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P25-201ENST00000468402 KIAA1841Q6NSI8 718 aa4.54□□□□□ -1.68
HMGB1P25-201ENST00000468402 UNQ6494/PRO21346Q6UXR6 183 aa4.54□□□□□ -1.68
HMGB1P25-201ENST00000468402 PRR18Q8N4B5 295 aa4.54□□□□□ -1.68
HMGB1P25-201ENST00000468402 OR14C36Q8NHC7 312 aa4.54□□□□□ -1.68
HMGB1P25-201ENST00000468402 LRTOMTQ8WZ04 291 aa4.54□□□□□ -1.68
HMGB1P25-201ENST00000468402 RPGRQ92834 1020 aaKnown RBP4.54□□□□□ -1.68
HMGB1P25-201ENST00000468402 FATE1Q969F0 183 aa4.54□□□□□ -1.68
HMGB1P25-201ENST00000468402 HDAC10Q969S8 669 aa4.54□□□□□ -1.68
HMGB1P25-201ENST00000468402 RIPOR3Q96MK2 946 aa4.54□□□□□ -1.68
HMGB1P25-201ENST00000468402 VPS11Q9H270 941 aa4.54□□□□□ -1.68
HMGB1P25-201ENST00000468402 PRDM12Q9H4Q4 367 aa4.54□□□□□ -1.68
HMGB1P25-201ENST00000468402 TRMT13Q9NUP7 481 aaKnown RBP4.54□□□□□ -1.68
HMGB1P25-201ENST00000468402 PIM2Q9P1W9 311 aa4.54□□□□□ -1.68
HMGB1P25-201ENST00000468402 L1RE1Q9UN81 338 aa4.54□□□□□ -1.68
HMGB1P25-201ENST00000468402 CORO2BQ9UQ03 480 aa4.54□□□□□ -1.68
HMGB1P25-201ENST00000468402 ZNF281Q9Y2X9 895 aa4.54□□□□□ -1.68
HMGB1P25-201ENST00000468402 ASB1Q9Y576 335 aa4.54□□□□□ -1.68
HMGB1P25-201ENST00000468402 MYPNQ86TC9 1320 aa4.53□□□□□ -1.68
HMGB1P25-201ENST00000468402 hCG_1642624A0A1W2PR95 340 aa4.53□□□□□ -1.68
HMGB1P25-201ENST00000468402 TCRBV5S2A0A599 114 aa4.53□□□□□ -1.68
HMGB1P25-201ENST00000468402 ACOT7O00154 380 aa4.53□□□□□ -1.68
HMGB1P25-201ENST00000468402 KPNA5O15131 536 aa4.53□□□□□ -1.68
HMGB1P25-201ENST00000468402 HTRA2O43464 458 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P25-201ENST00000468402 FTLP02792 175 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P25-201ENST00000468402 ARL4AP40617 200 aa4.53□□□□□ -1.68
HMGB1P25-201ENST00000468402 SLC6A11P48066 632 aa4.53□□□□□ -1.68
HMGB1P25-201ENST00000468402 RGS3P49796 1198 aa4.53□□□□□ -1.68
HMGB1P25-201ENST00000468402 PRKCQQ04759 706 aa4.53□□□□□ -1.68
HMGB1P25-201ENST00000468402 CHRNEQ04844 493 aa4.53□□□□□ -1.68
HMGB1P25-201ENST00000468402 ZP2Q05996 745 aa4.53□□□□□ -1.68
HMGB1P25-201ENST00000468402 MALLQ13021 153 aa4.53□□□□□ -1.68
HMGB1P25-201ENST00000468402 IL10RAQ13651 578 aa4.53□□□□□ -1.68
HMGB1P25-201ENST00000468402 NOLC1Q14978 699 aaKnown RBP eCLIP4.53□□□□□ -1.68
HMGB1P25-201ENST00000468402 C3orf36Q3SXR2 165 aa4.53□□□□□ -1.68
HMGB1P25-201ENST00000468402 ALFQ53S48 1182 aa4.53□□□□□ -1.68
HMGB1P25-201ENST00000468402 RALGPS1Q5JS13 557 aa4.53□□□□□ -1.68
HMGB1P25-201ENST00000468402 CCDC70Q6NSX1 233 aa4.53□□□□□ -1.68
HMGB1P25-201ENST00000468402 KLHDC10Q6PID8 442 aa4.53□□□□□ -1.68
HMGB1P25-201ENST00000468402 CCDC174Q6PII3 467 aa4.53□□□□□ -1.68
HMGB1P25-201ENST00000468402 LMBR1LQ6UX01 489 aa4.53□□□□□ -1.68
HMGB1P25-201ENST00000468402 MIGA2Q7L4E1 593 aa4.53□□□□□ -1.68
HMGB1P25-201ENST00000468402 KIAA0319LQ8IZA0 1049 aa4.53□□□□□ -1.68
HMGB1P25-201ENST00000468402 ANKS4BQ8N8V4 417 aa4.53□□□□□ -1.68
HMGB1P25-201ENST00000468402 MARCH10Q8NA82 808 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P25-201ENST00000468402 ARRDC4Q8NCT1 418 aa4.53□□□□□ -1.68
HMGB1P25-201ENST00000468402 KLHDC4Q8TBB5 520 aa4.53□□□□□ -1.68
HMGB1P25-201ENST00000468402 CALML6Q8TD86 181 aa4.53□□□□□ -1.68
HMGB1P25-201ENST00000468402 TSPEARQ8WU66 669 aa4.53□□□□□ -1.68
HMGB1P25-201ENST00000468402 GAB3Q8WWW8 586 aa4.53□□□□□ -1.68
HMGB1P25-201ENST00000468402 RSAD2Q8WXG1 361 aa4.53□□□□□ -1.68
HMGB1P25-201ENST00000468402 LINC01599Q8WXQ3 324 aa4.53□□□□□ -1.68
HMGB1P25-201ENST00000468402 KAT5Q92993 513 aa4.53□□□□□ -1.68
HMGB1P25-201ENST00000468402 SGCZQ96LD1 299 aa4.53□□□□□ -1.68
HMGB1P25-201ENST00000468402 ALPK1Q96QP1 1244 aa4.53□□□□□ -1.68
HMGB1P25-201ENST00000468402 CRB3Q9BUF7 120 aa4.53□□□□□ -1.68
HMGB1P25-201ENST00000468402 G6PC3Q9BUM1 346 aa4.53□□□□□ -1.68
HMGB1P25-201ENST00000468402 KRTAP4-7Q9BYR0 210 aa4.53□□□□□ -1.68
HMGB1P25-201ENST00000468402 CERS4Q9HA82 394 aa4.53□□□□□ -1.68
HMGB1P25-201ENST00000468402 CASS4Q9NQ75 786 aa4.53□□□□□ -1.68
HMGB1P25-201ENST00000468402 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.53□□□□□ -1.68
HMGB1P25-201ENST00000468402 EBF1Q9UH73 591 aa4.53□□□□□ -1.68
HMGB1P25-201ENST00000468402 PRSS50Q9UI38 385 aa4.53□□□□□ -1.68
HMGB1P25-201ENST00000468402 TPCN1Q9ULQ1 816 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms