RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 GRM6O15303 877 aa19.09■□□□□ 0.65
SSBP1-207ENST00000468267 GAS2O43903 313 aaKnown RBP19.09■□□□□ 0.65
SSBP1-207ENST00000468267 TRAPPC10P48553 1259 aa19.09■□□□□ 0.65
SSBP1-207ENST00000468267 EMC2Q15006 297 aa19.09■□□□□ 0.65
SSBP1-207ENST00000468267 TIGD5Q53EQ6 642 aa19.09■□□□□ 0.65
SSBP1-207ENST00000468267 NAALADL2Q58DX5 795 aa19.09■□□□□ 0.65
SSBP1-207ENST00000468267 TTC38Q5R3I4 469 aa19.09■□□□□ 0.65
SSBP1-207ENST00000468267 P2RX5Q93086 422 aa19.09■□□□□ 0.65
SSBP1-207ENST00000468267 TMEM143Q96AN5 459 aa19.09■□□□□ 0.65
SSBP1-207ENST00000468267 LMAN2LQ9H0V9 348 aa19.09■□□□□ 0.65
SSBP1-207ENST00000468267 CHST12Q9NRB3 414 aa19.09■□□□□ 0.65
SSBP1-207ENST00000468267 ANKEF1Q9NU02 776 aa19.09■□□□□ 0.65
SSBP1-207ENST00000468267 COL4A3BPQ9Y5P4 624 aa19.09■□□□□ 0.65
SSBP1-207ENST00000468267 A0A0U1RQF3 1178 aa19.08■□□□□ 0.64
SSBP1-207ENST00000468267 POTEMA6NI47 508 aa19.08■□□□□ 0.64
SSBP1-207ENST00000468267 FGFR1P11362 822 aa19.08■□□□□ 0.64
SSBP1-207ENST00000468267 SFPQP23246 707 aaKnown RBP eCLIP19.08■□□□□ 0.64
SSBP1-207ENST00000468267 MCM2P49736 904 aa19.08■□□□□ 0.64
SSBP1-207ENST00000468267 LAMTOR4Q0VGL1 99 aa19.08■□□□□ 0.64
SSBP1-207ENST00000468267 ECHDC2Q86YB7 292 aa19.08■□□□□ 0.64
SSBP1-207ENST00000468267 TCP11Q8WWU5 503 aa19.08■□□□□ 0.64
SSBP1-207ENST00000468267 PSPC1Q8WXF1 523 aaKnown RBP19.08■□□□□ 0.64
SSBP1-207ENST00000468267 NLRP4Q96MN2 994 aa19.08■□□□□ 0.64
SSBP1-207ENST00000468267 IFT122Q9HBG6 1241 aa19.08■□□□□ 0.64
SSBP1-207ENST00000468267 DACT1Q9NYF0 836 aa19.08■□□□□ 0.64
SSBP1-207ENST00000468267 PLAGL2Q9UPG8 496 aa19.08■□□□□ 0.64
SSBP1-207ENST00000468267 KIF3AQ9Y496 699 aa19.08■□□□□ 0.64
SSBP1-207ENST00000468267 ASAP2O43150 1006 aa19.07■□□□□ 0.64
SSBP1-207ENST00000468267 HOXA2O43364 376 aa19.07■□□□□ 0.64
SSBP1-207ENST00000468267 OR52Z1P0C646 297 aa19.07■□□□□ 0.64
SSBP1-207ENST00000468267 SPATA31C1P0DKV0 1188 aa19.07■□□□□ 0.64
SSBP1-207ENST00000468267 XRCC6P12956 609 aaKnown RBP eCLIP19.07■□□□□ 0.64
SSBP1-207ENST00000468267 BMP1P13497 986 aa19.07■□□□□ 0.64
SSBP1-207ENST00000468267 TECP42680 631 aa19.07■□□□□ 0.64
SSBP1-207ENST00000468267 C4orf32Q8N8J7 132 aa19.07■□□□□ 0.64
SSBP1-207ENST00000468267 NSUN3Q9H649 340 aaKnown RBP19.07■□□□□ 0.64
SSBP1-207ENST00000468267 BMP2KQ9NSY1 1161 aaPredicted RBP19.07■□□□□ 0.64
SSBP1-207ENST00000468267 RNF19AQ9NV58 838 aa19.07■□□□□ 0.64
SSBP1-207ENST00000468267 NOL7Q9UMY1 257 aaKnown RBP19.07■□□□□ 0.64
SSBP1-207ENST00000468267 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.06■□□□□ 0.64
SSBP1-207ENST00000468267 EOMESO95936 686 aa19.06■□□□□ 0.64
SSBP1-207ENST00000468267 ITGB1P05556 798 aa19.06■□□□□ 0.64
SSBP1-207ENST00000468267 SRGAP2CP0DJJ0 459 aa19.06■□□□□ 0.64
SSBP1-207ENST00000468267 TOB1P50616 345 aaPredicted RBP19.06■□□□□ 0.64
SSBP1-207ENST00000468267 TCEAL5Q5H9L2 206 aa19.06■□□□□ 0.64
SSBP1-207ENST00000468267 CATSPER4Q7RTX7 472 aa19.06■□□□□ 0.64
SSBP1-207ENST00000468267 SRGAP1Q7Z6B7 1085 aa19.06■□□□□ 0.64
SSBP1-207ENST00000468267 ZNF598Q86UK7 904 aaKnown RBP19.06■□□□□ 0.64
SSBP1-207ENST00000468267 FERMT3Q86UX7 667 aa19.06■□□□□ 0.64
SSBP1-207ENST00000468267 KLHL23Q8NBE8 558 aa19.06■□□□□ 0.64
SSBP1-207ENST00000468267 SPPL3Q8TCT6 385 aa19.06■□□□□ 0.64
SSBP1-207ENST00000468267 PIGOQ8TEQ8 1089 aa19.06■□□□□ 0.64
SSBP1-207ENST00000468267 CASD1Q96PB1 797 aa19.06■□□□□ 0.64
SSBP1-207ENST00000468267 MTRQ99707 1265 aa19.06■□□□□ 0.64
SSBP1-207ENST00000468267 POLR3CQ9BUI4 534 aaPredicted RBP19.06■□□□□ 0.64
SSBP1-207ENST00000468267 TRAIPQ9BWF2 469 aa19.06■□□□□ 0.64
SSBP1-207ENST00000468267 TMEM117Q9H0C3 514 aa19.06■□□□□ 0.64
SSBP1-207ENST00000468267 TUFT1Q9NNX1 390 aa19.06■□□□□ 0.64
SSBP1-207ENST00000468267 ALG13Q9NP73 1137 aaKnown RBP19.06■□□□□ 0.64
SSBP1-207ENST00000468267 XPNPEP1Q9NQW7 623 aa19.06■□□□□ 0.64
SSBP1-207ENST00000468267 TYW1Q9NV66 732 aaKnown RBP19.06■□□□□ 0.64
SSBP1-207ENST00000468267 A0A087WWV3 80 aa19.05■□□□□ 0.64
SSBP1-207ENST00000468267 RARRES1P49788 294 aa19.05■□□□□ 0.64
SSBP1-207ENST00000468267 KCNQ1P51787 676 aa19.05■□□□□ 0.64
SSBP1-207ENST00000468267 SPOUT1Q5T280 376 aaKnown RBP19.05■□□□□ 0.64
SSBP1-207ENST00000468267 CATSPER3Q86XQ3 398 aa19.05■□□□□ 0.64
SSBP1-207ENST00000468267 CWH43Q9H720 699 aa19.05■□□□□ 0.64
SSBP1-207ENST00000468267 UBE2ZQ9H832 354 aaPredicted RBP19.05■□□□□ 0.64
SSBP1-207ENST00000468267 MINDY3Q9H8M7 445 aa19.05■□□□□ 0.64
SSBP1-207ENST00000468267 AAASQ9NRG9 546 aa19.05■□□□□ 0.64
SSBP1-207ENST00000468267 PCDHB12Q9Y5F1 795 aa19.05■□□□□ 0.64
SSBP1-207ENST00000468267 PLXNA4Q9HCM2 1894 aa19.05■□□□□ 0.64
SSBP1-207ENST00000468267 MED24O75448 989 aa19.04■□□□□ 0.64
SSBP1-207ENST00000468267 DGAT1O75907 488 aa19.04■□□□□ 0.64
SSBP1-207ENST00000468267 ATF7P17544 494 aaPredicted RBP19.04■□□□□ 0.64
SSBP1-207ENST00000468267 DNAJB1P25685 340 aa19.04■□□□□ 0.64
SSBP1-207ENST00000468267 GJB2P29033 226 aa19.04■□□□□ 0.64
SSBP1-207ENST00000468267 PHKA2P46019 1235 aa19.04■□□□□ 0.64
SSBP1-207ENST00000468267 CAMK1Q14012 370 aa19.04■□□□□ 0.64
SSBP1-207ENST00000468267 MXD4Q14582 209 aaPredicted RBP19.04■□□□□ 0.64
SSBP1-207ENST00000468267 NBR1Q14596 966 aa19.04■□□□□ 0.64
SSBP1-207ENST00000468267 CLLU1OSQ5K130 101 aa19.04■□□□□ 0.64
SSBP1-207ENST00000468267 TWF2Q6IBS0 349 aaKnown RBP19.04■□□□□ 0.64
SSBP1-207ENST00000468267 RNF149Q8NC42 400 aa19.04■□□□□ 0.64
SSBP1-207ENST00000468267 RNF169Q8NCN4 708 aa19.04■□□□□ 0.64
SSBP1-207ENST00000468267 ADAMTS19Q8TE59 1207 aa19.04■□□□□ 0.64
SSBP1-207ENST00000468267 CCDC43Q96MW1 224 aaKnown RBP19.04■□□□□ 0.64
SSBP1-207ENST00000468267 HCSTQ9UBK5 93 aa19.04■□□□□ 0.64
SSBP1-207ENST00000468267 PIN4Q9Y237 131 aaKnown RBP19.04■□□□□ 0.64
SSBP1-207ENST00000468267 RPA1P27694 616 aa19.03■□□□□ 0.64
SSBP1-207ENST00000468267 ARL2P36404 184 aa19.03■□□□□ 0.64
SSBP1-207ENST00000468267 FXR2P51116 673 aaKnown RBP eCLIP19.03■□□□□ 0.64
SSBP1-207ENST00000468267 COL19A1Q14993 1142 aa19.03■□□□□ 0.64
SSBP1-207ENST00000468267 LRRC55Q6ZSA7 311 aa19.03■□□□□ 0.64
SSBP1-207ENST00000468267 ABI1Q8IZP0 508 aa19.03■□□□□ 0.64
SSBP1-207ENST00000468267 COLGALT1Q8NBJ5 622 aa19.03■□□□□ 0.64
SSBP1-207ENST00000468267 ERMNQ8TAM6 284 aa19.03■□□□□ 0.64
SSBP1-207ENST00000468267 NACC1Q96RE7 527 aa19.03■□□□□ 0.64
SSBP1-207ENST00000468267 AGPAT5Q9NUQ2 364 aa19.03■□□□□ 0.64
SSBP1-207ENST00000468267 DBR1Q9UK59 544 aaKnown RBP19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms