RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 DPYDQ12882 1025 aa16.81■□□□□ 0.28
SNIP1-202ENST00000468040 CAPSQ13938 189 aa16.81■□□□□ 0.28
SNIP1-202ENST00000468040 KIZQ2M2Z5 673 aa16.81■□□□□ 0.28
SNIP1-202ENST00000468040 ODR4Q5SWX8 454 aa16.81■□□□□ 0.28
SNIP1-202ENST00000468040 ZNF618Q5T7W0 954 aa16.81■□□□□ 0.28
SNIP1-202ENST00000468040 UNC13DQ70J99 1090 aa16.81■□□□□ 0.28
SNIP1-202ENST00000468040 LRRC8DQ7L1W4 858 aa16.81■□□□□ 0.28
SNIP1-202ENST00000468040 KSR1Q8IVT5 923 aa16.81■□□□□ 0.28
SNIP1-202ENST00000468040 C7orf61Q8IZ16 206 aa16.81■□□□□ 0.28
SNIP1-202ENST00000468040 PIAS4Q8N2W9 510 aaPredicted RBP16.81■□□□□ 0.28
SNIP1-202ENST00000468040 MYCT1Q8N699 235 aa16.81■□□□□ 0.28
SNIP1-202ENST00000468040 RNF149Q8NC42 400 aa16.81■□□□□ 0.28
SNIP1-202ENST00000468040 DPF3Q92784 378 aa16.81■□□□□ 0.28
SNIP1-202ENST00000468040 CCDC47Q96A33 483 aaKnown RBP16.81■□□□□ 0.28
SNIP1-202ENST00000468040 NFKBIZQ9BYH8 718 aa16.81■□□□□ 0.28
SNIP1-202ENST00000468040 NUP62CLQ9H1M0 184 aa16.81■□□□□ 0.28
SNIP1-202ENST00000468040 CLSTN2Q9H4D0 955 aa16.81■□□□□ 0.28
SNIP1-202ENST00000468040 PANK4Q9NVE7 773 aa16.81■□□□□ 0.28
SNIP1-202ENST00000468040 CDY2AQ9Y6F7 541 aa16.81■□□□□ 0.28
SNIP1-202ENST00000468040 ALPK3Q96L96 1907 aa16.8■□□□□ 0.28
SNIP1-202ENST00000468040 LRRIQ4A6NIV6 560 aa16.8■□□□□ 0.28
SNIP1-202ENST00000468040 CCDC169A6NNP5 214 aa16.8■□□□□ 0.28
SNIP1-202ENST00000468040 SFI1A8K8P3 1242 aa16.8■□□□□ 0.28
SNIP1-202ENST00000468040 H0YCG3 227 aa16.8■□□□□ 0.28
SNIP1-202ENST00000468040 SMC2O95347 1197 aa16.8■□□□□ 0.28
SNIP1-202ENST00000468040 CHRNA1P02708 482 aa16.8■□□□□ 0.28
SNIP1-202ENST00000468040 PRR29P0C7W0 189 aa16.8■□□□□ 0.28
SNIP1-202ENST00000468040 SCP2P22307 547 aa16.8■□□□□ 0.28
SNIP1-202ENST00000468040 CASP1P29466 404 aa16.8■□□□□ 0.28
SNIP1-202ENST00000468040 PHKA2P46019 1235 aa16.8■□□□□ 0.28
SNIP1-202ENST00000468040 NPTX2P47972 431 aa16.8■□□□□ 0.28
SNIP1-202ENST00000468040 SMTNP53814 917 aa16.8■□□□□ 0.28
SNIP1-202ENST00000468040 PEX3P56589 373 aa16.8■□□□□ 0.28
SNIP1-202ENST00000468040 MGAT3Q09327 533 aa16.8■□□□□ 0.28
SNIP1-202ENST00000468040 PNOCQ13519 176 aa16.8■□□□□ 0.28
SNIP1-202ENST00000468040 HERC4Q5GLZ8 1057 aaPredicted RBP16.8■□□□□ 0.28
SNIP1-202ENST00000468040 FAM178BQ8IXR5 827 aa16.8■□□□□ 0.28
SNIP1-202ENST00000468040 SLC17A8Q8NDX2 589 aa16.8■□□□□ 0.28
SNIP1-202ENST00000468040 DEPTORQ8TB45 409 aa16.8■□□□□ 0.28
SNIP1-202ENST00000468040 SPIRE2Q8WWL2 714 aa16.8■□□□□ 0.28
SNIP1-202ENST00000468040 BSNDQ8WZ55 320 aa16.8■□□□□ 0.28
SNIP1-202ENST00000468040 PPP1R16BQ96T49 567 aa16.8■□□□□ 0.28
SNIP1-202ENST00000468040 NTPCRQ9BSD7 190 aaKnown RBP16.8■□□□□ 0.28
SNIP1-202ENST00000468040 GCOM2Q9BZD3 368 aaPredicted RBP16.8■□□□□ 0.28
SNIP1-202ENST00000468040 C2orf40Q9H1Z8 148 aa16.8■□□□□ 0.28
SNIP1-202ENST00000468040 ADAMTS10Q9H324 1103 aa16.8■□□□□ 0.28
SNIP1-202ENST00000468040 POLD4Q9HCU8 107 aa16.8■□□□□ 0.28
SNIP1-202ENST00000468040 GINS2Q9Y248 185 aa16.8■□□□□ 0.28
SNIP1-202ENST00000468040 DNAH12Q6ZR08 3092 aa16.8■□□□□ 0.28
SNIP1-202ENST00000468040 PHLPP2Q6ZVD8 1323 aa16.79■□□□□ 0.28
SNIP1-202ENST00000468040 A0A087WZ62 844 aa16.79■□□□□ 0.28
SNIP1-202ENST00000468040 TRAK2O60296 914 aa16.79■□□□□ 0.28
SNIP1-202ENST00000468040 TIMP1P01033 207 aa16.79■□□□□ 0.28
SNIP1-202ENST00000468040 RPN1P04843 607 aaKnown RBP16.79■□□□□ 0.28
SNIP1-202ENST00000468040 IQCF3P0C7M6 154 aa16.79■□□□□ 0.28
SNIP1-202ENST00000468040 MAPTP10636 758 aaKnown RBP16.79■□□□□ 0.28
SNIP1-202ENST00000468040 RAG1P15918 1043 aa16.79■□□□□ 0.28
SNIP1-202ENST00000468040 EIF4BP23588 611 aaKnown RBP16.79■□□□□ 0.28
SNIP1-202ENST00000468040 ABCD1P33897 745 aa16.79■□□□□ 0.28
SNIP1-202ENST00000468040 EFNA5P52803 228 aa16.79■□□□□ 0.28
SNIP1-202ENST00000468040 COASYQ13057 564 aa16.79■□□□□ 0.28
SNIP1-202ENST00000468040 NFKBIBQ15653 356 aa16.79■□□□□ 0.28
SNIP1-202ENST00000468040 SKOR2Q2VWA4 1001 aaPredicted RBP16.79■□□□□ 0.28
SNIP1-202ENST00000468040 TRAF7Q6Q0C0 670 aa16.79■□□□□ 0.28
SNIP1-202ENST00000468040 SFR1Q86XK3 245 aa16.79■□□□□ 0.28
SNIP1-202ENST00000468040 IFNLR1Q8IU57 520 aaPredicted RBP16.79■□□□□ 0.28
SNIP1-202ENST00000468040 ZBTB8OSQ8IWT0 167 aa16.79■□□□□ 0.28
SNIP1-202ENST00000468040 USP38Q8NB14 1042 aa16.79■□□□□ 0.28
SNIP1-202ENST00000468040 SMARCE1Q969G3 411 aa16.79■□□□□ 0.28
SNIP1-202ENST00000468040 GSDMAQ96QA5 445 aa16.79■□□□□ 0.28
SNIP1-202ENST00000468040 OSMRQ99650 979 aa16.79■□□□□ 0.28
SNIP1-202ENST00000468040 FDXACB1Q9BRP7 624 aaPredicted RBP16.79■□□□□ 0.28
SNIP1-202ENST00000468040 PPP1R12CQ9BZL4 782 aa16.79■□□□□ 0.28
SNIP1-202ENST00000468040 INO80BQ9C086 356 aaPredicted RBP16.79■□□□□ 0.28
SNIP1-202ENST00000468040 KMT5AQ9NQR1 393 aa16.79■□□□□ 0.28
SNIP1-202ENST00000468040 OLFML3Q9NRN5 406 aa16.79■□□□□ 0.28
SNIP1-202ENST00000468040 EXOC1Q9NV70 894 aa16.79■□□□□ 0.28
SNIP1-202ENST00000468040 RMND1Q9NWS8 449 aa16.79■□□□□ 0.28
SNIP1-202ENST00000468040 SQORQ9Y6N5 450 aa16.79■□□□□ 0.28
SNIP1-202ENST00000468040 MYH11P35749 1972 aa16.78■□□□□ 0.28
SNIP1-202ENST00000468040 TANC1Q9C0D5 1861 aa16.78■□□□□ 0.28
SNIP1-202ENST00000468040 TRIM43BA6NCK2 446 aa16.78■□□□□ 0.28
SNIP1-202ENST00000468040 DARSP14868 501 aaKnown RBP16.78■□□□□ 0.28
SNIP1-202ENST00000468040 PTENP60484 403 aa16.78■□□□□ 0.28
SNIP1-202ENST00000468040 KCNB1Q14721 858 aa16.78■□□□□ 0.28
SNIP1-202ENST00000468040 PCBP1Q15365 356 aaKnown RBP eCLIP16.78■□□□□ 0.28
SNIP1-202ENST00000468040 CAMK4Q16566 473 aa16.78■□□□□ 0.28
SNIP1-202ENST00000468040 KLHL40Q2TBA0 621 aa16.78■□□□□ 0.28
SNIP1-202ENST00000468040 CDCA2Q69YH5 1023 aaPredicted RBP16.78■□□□□ 0.28
SNIP1-202ENST00000468040 SRGAP1Q7Z6B7 1085 aa16.78■□□□□ 0.28
SNIP1-202ENST00000468040 SYAP1Q96A49 352 aaPredicted RBP16.78■□□□□ 0.28
SNIP1-202ENST00000468040 TRIM43Q96BQ3 446 aaPredicted RBP16.78■□□□□ 0.28
SNIP1-202ENST00000468040 IFT122Q9HBG6 1241 aa16.78■□□□□ 0.28
SNIP1-202ENST00000468040 NR2E3Q9Y5X4 410 aa16.78■□□□□ 0.28
SNIP1-202ENST00000468040 UMODL1Q5DID0 1318 aa16.77■□□□□ 0.28
SNIP1-202ENST00000468040 K7ENM7 598 aa16.77■□□□□ 0.28
SNIP1-202ENST00000468040 KLRC4O43908 158 aa16.77■□□□□ 0.28
SNIP1-202ENST00000468040 CYP2C18P33260 490 aa16.77■□□□□ 0.28
SNIP1-202ENST00000468040 RFC2P35250 354 aa16.77■□□□□ 0.28
SNIP1-202ENST00000468040 NCKAP1LP55160 1127 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms