RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 PHF24Q9UPV7 400 aa6.6□□□□□ -1.35
USP39-213ENST00000467885 ZSWIM8A7E2V4 1837 aa6.6□□□□□ -1.35
USP39-213ENST00000467885 MOXD2PA6NHM9 499 aa6.59□□□□□ -1.35
USP39-213ENST00000467885 ASAP2O43150 1006 aa6.59□□□□□ -1.35
USP39-213ENST00000467885 TREHO43280 583 aa6.59□□□□□ -1.35
USP39-213ENST00000467885 USO1O60763 962 aaKnown RBP6.59□□□□□ -1.35
USP39-213ENST00000467885 CABYRO75952 493 aa6.59□□□□□ -1.35
USP39-213ENST00000467885 C22orf31O95567 290 aa6.59□□□□□ -1.35
USP39-213ENST00000467885 TFRCP02786 760 aaKnown RBP6.59□□□□□ -1.35
USP39-213ENST00000467885 MAPTP10636 758 aaKnown RBP6.59□□□□□ -1.35
USP39-213ENST00000467885 PLS3P13797 630 aa6.59□□□□□ -1.35
USP39-213ENST00000467885 IDEP14735 1019 aa6.59□□□□□ -1.35
USP39-213ENST00000467885 GLRA2P23416 452 aa6.59□□□□□ -1.35
USP39-213ENST00000467885 GJA8P48165 433 aa6.59□□□□□ -1.35
USP39-213ENST00000467885 RTP1P59025 263 aa6.59□□□□□ -1.35
USP39-213ENST00000467885 ASIC1P78348 528 aa6.59□□□□□ -1.35
USP39-213ENST00000467885 POU5F1BQ06416 359 aa6.59□□□□□ -1.35
USP39-213ENST00000467885 ITGA7Q13683 1181 aa6.59□□□□□ -1.35
USP39-213ENST00000467885 GRIK4Q16099 956 aa6.59□□□□□ -1.35
USP39-213ENST00000467885 COBLL1Q53SF7 1204 aa6.59□□□□□ -1.35
USP39-213ENST00000467885 GDF6Q6KF10 455 aaPredicted RBP6.59□□□□□ -1.35
USP39-213ENST00000467885 SASS6Q6UVJ0 657 aa6.59□□□□□ -1.35
USP39-213ENST00000467885 LRSAM1Q6UWE0 723 aa6.59□□□□□ -1.35
USP39-213ENST00000467885 EPM2AIP1Q7L775 607 aaPredicted RBP6.59□□□□□ -1.35
USP39-213ENST00000467885 SESTD1Q86VW0 696 aa6.59□□□□□ -1.35
USP39-213ENST00000467885 KSR1Q8IVT5 923 aa6.59□□□□□ -1.35
USP39-213ENST00000467885 CCDC65Q8IXS2 484 aa6.59□□□□□ -1.35
USP39-213ENST00000467885 EXOC8Q8IYI6 725 aa6.59□□□□□ -1.35
USP39-213ENST00000467885 ADSSL1Q8N142 457 aa6.59□□□□□ -1.35
USP39-213ENST00000467885 MYCT1Q8N699 235 aa6.59□□□□□ -1.35
USP39-213ENST00000467885 TRIML1Q8N9V2 468 aa6.59□□□□□ -1.35
USP39-213ENST00000467885 MLKLQ8NB16 471 aa6.59□□□□□ -1.35
USP39-213ENST00000467885 KIAA0895Q8NCT3 520 aa6.59□□□□□ -1.35
USP39-213ENST00000467885 SPIRE2Q8WWL2 714 aa6.59□□□□□ -1.35
USP39-213ENST00000467885 KCNN1Q92952 543 aa6.59□□□□□ -1.35
USP39-213ENST00000467885 CCDC34Q96HJ3 373 aa6.59□□□□□ -1.35
USP39-213ENST00000467885 ANP32EQ9BTT0 268 aa6.59□□□□□ -1.35
USP39-213ENST00000467885 TIPINQ9BVW5 301 aa6.59□□□□□ -1.35
USP39-213ENST00000467885 MCOLN1Q9GZU1 580 aa6.59□□□□□ -1.35
USP39-213ENST00000467885 ADAMTS10Q9H324 1103 aa6.59□□□□□ -1.35
USP39-213ENST00000467885 ST6GALNAC4Q9H4F1 302 aa6.59□□□□□ -1.35
USP39-213ENST00000467885 SUGCTQ9HAC7 445 aa6.59□□□□□ -1.35
USP39-213ENST00000467885 C17orf75Q9HAS0 396 aa6.59□□□□□ -1.35
USP39-213ENST00000467885 CDHR5Q9HBB8 845 aa6.59□□□□□ -1.35
USP39-213ENST00000467885 SLC39A2Q9NP94 309 aa6.59□□□□□ -1.35
USP39-213ENST00000467885 SUCLA2Q9P2R7 463 aaPredicted RBP6.59□□□□□ -1.35
USP39-213ENST00000467885 ZNF215Q9UL58 517 aaPredicted RBP6.59□□□□□ -1.35
USP39-213ENST00000467885 COL4A3BPQ9Y5P4 624 aa6.59□□□□□ -1.35
USP39-213ENST00000467885 SMIM35A0A1B0GVV1 85 aa6.58□□□□□ -1.36
USP39-213ENST00000467885 ARVCFO00192 962 aa6.58□□□□□ -1.36
USP39-213ENST00000467885 DNM1LO00429 736 aa6.58□□□□□ -1.36
USP39-213ENST00000467885 GPR32O75388 356 aa6.58□□□□□ -1.36
USP39-213ENST00000467885 COL6A1P12109 1028 aa6.58□□□□□ -1.36
USP39-213ENST00000467885 GAP43P17677 238 aa6.58□□□□□ -1.36
USP39-213ENST00000467885 NMT1P30419 496 aaKnown RBP6.58□□□□□ -1.36
USP39-213ENST00000467885 NPTX2P47972 431 aa6.58□□□□□ -1.36
USP39-213ENST00000467885 CASP5P51878 434 aa6.58□□□□□ -1.36
USP39-213ENST00000467885 POLGP54098 1239 aaPredicted RBP6.58□□□□□ -1.36
USP39-213ENST00000467885 PEX3P56589 373 aa6.58□□□□□ -1.36
USP39-213ENST00000467885 CHMP4BP1P59074 171 aa6.58□□□□□ -1.36
USP39-213ENST00000467885 IGBP1P78318 339 aa6.58□□□□□ -1.36
USP39-213ENST00000467885 GTF2BQ00403 316 aa6.58□□□□□ -1.36
USP39-213ENST00000467885 PTPN11Q06124 597 aaPredicted RBP6.58□□□□□ -1.36
USP39-213ENST00000467885 TYRO3Q06418 890 aa6.58□□□□□ -1.36
USP39-213ENST00000467885 KCNA1Q09470 495 aa6.58□□□□□ -1.36
USP39-213ENST00000467885 TBC1D8BQ0IIM8 1120 aa6.58□□□□□ -1.36
USP39-213ENST00000467885 LAMTOR4Q0VGL1 99 aa6.58□□□□□ -1.36
USP39-213ENST00000467885 COASYQ13057 564 aa6.58□□□□□ -1.36
USP39-213ENST00000467885 PPFIA1Q13136 1202 aa6.58□□□□□ -1.36
USP39-213ENST00000467885 IQCB1Q15051 598 aa6.58□□□□□ -1.36
USP39-213ENST00000467885 DPCR1Q3MIW9 517 aa6.58□□□□□ -1.36
USP39-213ENST00000467885 ZC2HC1CQ53FD0 456 aaPredicted RBP6.58□□□□□ -1.36
USP39-213ENST00000467885 CT47A1Q5JQC4 288 aaPredicted RBP6.58□□□□□ -1.36
USP39-213ENST00000467885 ODR4Q5SWX8 454 aa6.58□□□□□ -1.36
USP39-213ENST00000467885 C6orf132Q5T0Z8 1188 aa6.58□□□□□ -1.36
USP39-213ENST00000467885 FAM102BQ5T8I3 360 aa6.58□□□□□ -1.36
USP39-213ENST00000467885 CENPPQ6IPU0 288 aa6.58□□□□□ -1.36
USP39-213ENST00000467885 NFRKBQ6P4R8 1299 aa6.58□□□□□ -1.36
USP39-213ENST00000467885 RUFY4Q6ZNE9 571 aa6.58□□□□□ -1.36
USP39-213ENST00000467885 HAUS6Q7Z4H7 955 aa6.58□□□□□ -1.36
USP39-213ENST00000467885 RPAINQ86UA6 219 aa6.58□□□□□ -1.36
USP39-213ENST00000467885 SFR1Q86XK3 245 aa6.58□□□□□ -1.36
USP39-213ENST00000467885 SMYD4Q8IYR2 804 aaPredicted RBP6.58□□□□□ -1.36
USP39-213ENST00000467885 NME8Q8N427 588 aa6.58□□□□□ -1.36
USP39-213ENST00000467885 LRRC71Q8N4P6 559 aa6.58□□□□□ -1.36
USP39-213ENST00000467885 C7orf31Q8N865 590 aa6.58□□□□□ -1.36
USP39-213ENST00000467885 TMEM161BQ8NDZ6 487 aa6.58□□□□□ -1.36
USP39-213ENST00000467885 MCPH1Q8NEM0 835 aa6.58□□□□□ -1.36
USP39-213ENST00000467885 ASAP3Q8TDY4 903 aa6.58□□□□□ -1.36
USP39-213ENST00000467885 U2AF1L4Q8WU68 220 aaKnown RBP6.58□□□□□ -1.36
USP39-213ENST00000467885 SCFD1Q8WVM8 642 aa6.58□□□□□ -1.36
USP39-213ENST00000467885 LMBR1Q8WVP7 490 aa6.58□□□□□ -1.36
USP39-213ENST00000467885 SLC7A3Q8WY07 619 aa6.58□□□□□ -1.36
USP39-213ENST00000467885 KIFAP3Q92845 792 aa6.58□□□□□ -1.36
USP39-213ENST00000467885 VTI1AQ96AJ9 217 aa6.58□□□□□ -1.36
USP39-213ENST00000467885 RBSNQ9H1K0 784 aa6.58□□□□□ -1.36
USP39-213ENST00000467885 SEMA6BQ9H3T3 888 aa6.58□□□□□ -1.36
USP39-213ENST00000467885 PARVGQ9HBI0 331 aa6.58□□□□□ -1.36
USP39-213ENST00000467885 OLFML3Q9NRN5 406 aa6.58□□□□□ -1.36
USP39-213ENST00000467885 ANO10Q9NW15 660 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms