RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 DACT1Q9NYF0 836 aa23.67■■□□□ 1.38
COL9A3-207ENST00000467819 ARID2Q68CP9 1835 aa23.66■■□□□ 1.38
COL9A3-207ENST00000467819 HIDE1A8MVS5 230 aa23.66■■□□□ 1.38
COL9A3-207ENST00000467819 KRT17Q04695 432 aa23.66■■□□□ 1.38
COL9A3-207ENST00000467819 PLA2G4FQ68DD2 849 aa23.66■■□□□ 1.38
COL9A3-207ENST00000467819 LLGL2Q6P1M3 1020 aa23.66■■□□□ 1.38
COL9A3-207ENST00000467819 HFE2Q6ZVN8 426 aa23.66■■□□□ 1.38
COL9A3-207ENST00000467819 ZNF598Q86UK7 904 aaKnown RBP23.66■■□□□ 1.38
COL9A3-207ENST00000467819 RHPN2Q8IUC4 686 aa23.66■■□□□ 1.38
COL9A3-207ENST00000467819 FAM177A1Q8N128 213 aaPredicted RBP23.66■■□□□ 1.38
COL9A3-207ENST00000467819 SPG21Q9NZD8 308 aa23.66■■□□□ 1.38
COL9A3-207ENST00000467819 SUCLA2Q9P2R7 463 aaPredicted RBP23.66■■□□□ 1.38
COL9A3-207ENST00000467819 IGKV6-21A0A0C4DH24 114 aa23.65■■□□□ 1.38
COL9A3-207ENST00000467819 LOC730098B7Z3J9 87 aa23.65■■□□□ 1.38
COL9A3-207ENST00000467819 DTNBO60941 627 aa23.65■■□□□ 1.38
COL9A3-207ENST00000467819 EOMESO95936 686 aa23.65■■□□□ 1.38
COL9A3-207ENST00000467819 SRGAP2BP0DMP2 458 aa23.65■■□□□ 1.38
COL9A3-207ENST00000467819 TMC7Q7Z402 723 aa23.65■■□□□ 1.38
COL9A3-207ENST00000467819 RPGRIP1Q96KN7 1286 aa23.65■■□□□ 1.38
COL9A3-207ENST00000467819 APOL5Q9BWW9 433 aa23.65■■□□□ 1.38
COL9A3-207ENST00000467819 PHF7Q9BWX1 381 aaPredicted RBP23.65■■□□□ 1.38
COL9A3-207ENST00000467819 WDFY4Q6ZS81 3184 aa23.64■■□□□ 1.38
COL9A3-207ENST00000467819 CCDC194A0A1B0GVG4 234 aa23.64■■□□□ 1.37
COL9A3-207ENST00000467819 EML1O00423 815 aa23.64■■□□□ 1.37
COL9A3-207ENST00000467819 SFPQP23246 707 aaKnown RBP eCLIP23.64■■□□□ 1.37
COL9A3-207ENST00000467819 TECP42680 631 aa23.64■■□□□ 1.37
COL9A3-207ENST00000467819 PSMC5P62195 406 aa23.64■■□□□ 1.37
COL9A3-207ENST00000467819 CDC42EP1Q00587 391 aa23.64■■□□□ 1.37
COL9A3-207ENST00000467819 SCRN1Q12765 414 aa23.64■■□□□ 1.37
COL9A3-207ENST00000467819 LONRF3Q496Y0 759 aa23.64■■□□□ 1.37
COL9A3-207ENST00000467819 TWF2Q6IBS0 349 aaKnown RBP23.64■■□□□ 1.37
COL9A3-207ENST00000467819 ANO5Q75V66 913 aa23.64■■□□□ 1.37
COL9A3-207ENST00000467819 KSR1Q8IVT5 923 aa23.64■■□□□ 1.37
COL9A3-207ENST00000467819 NLRP4Q96MN2 994 aa23.64■■□□□ 1.37
COL9A3-207ENST00000467819 PHF20Q9BVI0 1012 aa23.64■■□□□ 1.37
COL9A3-207ENST00000467819 SLKQ9H2G2 1235 aaPredicted RBP23.64■■□□□ 1.37
COL9A3-207ENST00000467819 NGRNQ9NPE2 291 aaKnown RBP23.64■■□□□ 1.37
COL9A3-207ENST00000467819 PIN4Q9Y237 131 aaKnown RBP23.64■■□□□ 1.37
COL9A3-207ENST00000467819 PIEZO1Q92508 2521 aa23.64■■□□□ 1.37
COL9A3-207ENST00000467819 NT5C1B-RDH14C9J2C7 533 aa23.63■■□□□ 1.37
COL9A3-207ENST00000467819 MAFO75444 373 aaPredicted RBP23.63■■□□□ 1.37
COL9A3-207ENST00000467819 CDKL5O76039 1030 aa23.63■■□□□ 1.37
COL9A3-207ENST00000467819 PHKA2P46019 1235 aa23.63■■□□□ 1.37
COL9A3-207ENST00000467819 KCNC3Q14003 757 aa23.63■■□□□ 1.37
COL9A3-207ENST00000467819 ZNF410Q86VK4 478 aa23.63■■□□□ 1.37
COL9A3-207ENST00000467819 SLC39A11Q8N1S5 342 aa23.63■■□□□ 1.37
COL9A3-207ENST00000467819 SUSD6Q92537 303 aa23.63■■□□□ 1.37
COL9A3-207ENST00000467819 EDAQ92838 391 aa23.63■■□□□ 1.37
COL9A3-207ENST00000467819 MRPL9Q9BYD2 267 aaKnown RBP23.63■■□□□ 1.37
COL9A3-207ENST00000467819 CHST12Q9NRB3 414 aa23.63■■□□□ 1.37
COL9A3-207ENST00000467819 GJB4Q9NTQ9 266 aa23.63■■□□□ 1.37
COL9A3-207ENST00000467819 CA8P35219 290 aa23.62■■□□□ 1.37
COL9A3-207ENST00000467819 BCAR1P56945 870 aa23.62■■□□□ 1.37
COL9A3-207ENST00000467819 ANKRD54Q6NXT1 300 aa23.62■■□□□ 1.37
COL9A3-207ENST00000467819 CATSPER4Q7RTX7 472 aa23.62■■□□□ 1.37
COL9A3-207ENST00000467819 NEK8Q86SG6 692 aa23.62■■□□□ 1.37
COL9A3-207ENST00000467819 LPPQ93052 612 aa23.62■■□□□ 1.37
COL9A3-207ENST00000467819 INO80BQ9C086 356 aaPredicted RBP23.62■■□□□ 1.37
COL9A3-207ENST00000467819 VAV3Q9UKW4 847 aa23.62■■□□□ 1.37
COL9A3-207ENST00000467819 STK36Q9NRP7 1315 aa23.61■■□□□ 1.37
COL9A3-207ENST00000467819 XBP1P17861 261 aa23.61■■□□□ 1.37
COL9A3-207ENST00000467819 QARSP47897 775 aaKnown RBP23.61■■□□□ 1.37
COL9A3-207ENST00000467819 NPEPPSP55786 919 aa23.61■■□□□ 1.37
COL9A3-207ENST00000467819 PPP2R5CQ13362 524 aa23.61■■□□□ 1.37
COL9A3-207ENST00000467819 SMC1AQ14683 1233 aaKnown RBP23.61■■□□□ 1.37
COL9A3-207ENST00000467819 CBX2Q14781 532 aaPredicted RBP23.61■■□□□ 1.37
COL9A3-207ENST00000467819 TMEM184AQ6ZMB5 413 aa23.61■■□□□ 1.37
COL9A3-207ENST00000467819 FAM20AQ96MK3 541 aa23.61■■□□□ 1.37
COL9A3-207ENST00000467819 JPH2Q9BR39 696 aaPredicted RBP23.61■■□□□ 1.37
COL9A3-207ENST00000467819 S1PR5Q9H228 398 aa23.61■■□□□ 1.37
COL9A3-207ENST00000467819 KCNMB3Q9NPA1 279 aa23.61■■□□□ 1.37
COL9A3-207ENST00000467819 CYP26B1Q9NR63 512 aa23.61■■□□□ 1.37
COL9A3-207ENST00000467819 CCNT1O60563 726 aaKnown RBP23.6■■□□□ 1.37
COL9A3-207ENST00000467819 ZC3H11AO75152 810 aaKnown RBP eCLIP23.6■■□□□ 1.374e-8■■□□□ 14.3
COL9A3-207ENST00000467819 ALDH7A1P49419 539 aaKnown RBP23.6■■□□□ 1.37
COL9A3-207ENST00000467819 SYCE2Q6PIF2 218 aa23.6■■□□□ 1.37
COL9A3-207ENST00000467819 PIK3AP1Q6ZUJ8 805 aa23.6■■□□□ 1.37
COL9A3-207ENST00000467819 OXER1Q8TDS5 423 aa23.6■■□□□ 1.37
COL9A3-207ENST00000467819 TMEM169Q96HH4 297 aa23.6■■□□□ 1.37
COL9A3-207ENST00000467819 MFSD14AQ96MC6 490 aa23.6■■□□□ 1.37
COL9A3-207ENST00000467819 BMP2KQ9NSY1 1161 aaPredicted RBP23.6■■□□□ 1.37
COL9A3-207ENST00000467819 WRAP73Q9P2S5 460 aaPredicted RBP23.6■■□□□ 1.37
COL9A3-207ENST00000467819 TPCN1Q9ULQ1 816 aa23.6■■□□□ 1.37
COL9A3-207ENST00000467819 INPP5FQ9Y2H2 1132 aa23.6■■□□□ 1.37
COL9A3-207ENST00000467819 MARCH6O60337 910 aa23.59■■□□□ 1.37
COL9A3-207ENST00000467819 DKC1O60832 514 aaKnown RBP eCLIP23.59■■□□□ 1.37
COL9A3-207ENST00000467819 GCFC2P16383 781 aaKnown RBP23.59■■□□□ 1.37
COL9A3-207ENST00000467819 SP100P23497 879 aaPredicted RBP23.59■■□□□ 1.37
COL9A3-207ENST00000467819 PPP4R3AQ6IN85 833 aa23.59■■□□□ 1.37
COL9A3-207ENST00000467819 ZNF579Q8NAF0 562 aaKnown RBP23.59■■□□□ 1.37
COL9A3-207ENST00000467819 SLC7A3Q8WY07 619 aa23.59■■□□□ 1.37
COL9A3-207ENST00000467819 CEP170P1Q96L14 293 aa23.59■■□□□ 1.37
COL9A3-207ENST00000467819 FBXL18Q96ME1 805 aa23.59■■□□□ 1.37
COL9A3-207ENST00000467819 TRAIPQ9BWF2 469 aa23.59■■□□□ 1.37
COL9A3-207ENST00000467819 FAM105AQ9NUU6 356 aa23.59■■□□□ 1.37
COL9A3-207ENST00000467819 COL4A3BPQ9Y5P4 624 aa23.59■■□□□ 1.37
COL9A3-207ENST00000467819 C2orf71A6NGG8 1288 aa23.58■■□□□ 1.37
COL9A3-207ENST00000467819 MEIS3P2A8K0S8 358 aa23.58■■□□□ 1.37
COL9A3-207ENST00000467819 PFKFB2O60825 505 aa23.58■■□□□ 1.37
COL9A3-207ENST00000467819 P4HBP07237 508 aaKnown RBP23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms