RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 NUDT5Q9UKK9 219 aa5.39□□□□□ -1.55
SSR3-204ENST00000467733 SF3B6Q9Y3B4 125 aaKnown RBP5.39□□□□□ -1.55
SSR3-204ENST00000467733 SH3TC1Q8TE82 1336 aa5.39□□□□□ -1.55
SSR3-204ENST00000467733 ARAP2Q8WZ64 1704 aa5.38□□□□□ -1.55
SSR3-204ENST00000467733 GLI4P10075 376 aa5.38□□□□□ -1.55
SSR3-204ENST00000467733 HSPA5P11021 654 aaKnown RBP5.38□□□□□ -1.55
SSR3-204ENST00000467733 ERCC5P28715 1186 aaPredicted RBP5.38□□□□□ -1.55
SSR3-204ENST00000467733 PMLP29590 882 aa5.38□□□□□ -1.55
SSR3-204ENST00000467733 PMS1P54277 932 aaKnown RBP5.38□□□□□ -1.55
SSR3-204ENST00000467733 EIF4A1P60842 406 aaKnown RBP5.38□□□□□ -1.55
SSR3-204ENST00000467733 SP3Q02447 781 aa5.38□□□□□ -1.55
SSR3-204ENST00000467733 DCTN1Q14203 1278 aa5.38□□□□□ -1.55
SSR3-204ENST00000467733 HSP90AB3PQ58FF7 597 aa5.38□□□□□ -1.55
SSR3-204ENST00000467733 FBXW10Q5XX13 1052 aa5.38□□□□□ -1.55
SSR3-204ENST00000467733 ZNF761Q86XN6 746 aaPredicted RBP5.38□□□□□ -1.55
SSR3-204ENST00000467733 APOBEC3FQ8IUX4 373 aaKnown RBP5.38□□□□□ -1.55
SSR3-204ENST00000467733 PNISRQ8TF01 805 aaKnown RBP5.38□□□□□ -1.55
SSR3-204ENST00000467733 CELF1Q92879 486 aaKnown RBP5.38□□□□□ -1.55
SSR3-204ENST00000467733 ZNF428Q96B54 188 aa5.38□□□□□ -1.55
SSR3-204ENST00000467733 WNK4Q96J92 1243 aa5.38□□□□□ -1.55
SSR3-204ENST00000467733 CRBNQ96SW2 442 aa5.38□□□□□ -1.55
SSR3-204ENST00000467733 TRMT112Q9UI30 125 aaKnown RBP5.38□□□□□ -1.55
SSR3-204ENST00000467733 SCAF8Q9UPN6 1271 aaKnown RBP5.38□□□□□ -1.55
SSR3-204ENST00000467733 INPP5FQ9Y2H2 1132 aa5.38□□□□□ -1.55
SSR3-204ENST00000467733 FHOD1Q9Y613 1164 aa5.38□□□□□ -1.55
SSR3-204ENST00000467733 PTCH2Q9Y6C5 1203 aa5.38□□□□□ -1.55
SSR3-204ENST00000467733 MGAMO43451 1857 aa5.37□□□□□ -1.55
SSR3-204ENST00000467733 C9IYK1 514 aa5.37□□□□□ -1.55
SSR3-204ENST00000467733 UFL1O94874 794 aa5.37□□□□□ -1.55
SSR3-204ENST00000467733 PLATP00750 562 aa5.37□□□□□ -1.55
SSR3-204ENST00000467733 ZNF20P17024 532 aa5.37□□□□□ -1.55
SSR3-204ENST00000467733 GNL2Q13823 731 aaKnown RBP5.37□□□□□ -1.55
SSR3-204ENST00000467733 ARHGEF6Q15052 776 aa5.37□□□□□ -1.55
SSR3-204ENST00000467733 SF3B3Q15393 1217 aaKnown RBP5.37□□□□□ -1.55
SSR3-204ENST00000467733 CC2D1BQ5T0F9 858 aaKnown RBP5.37□□□□□ -1.55
SSR3-204ENST00000467733 OTUD7BQ6GQQ9 843 aa5.37□□□□□ -1.55
SSR3-204ENST00000467733 TAB3Q8N5C8 712 aaPredicted RBP5.37□□□□□ -1.55
SSR3-204ENST00000467733 NETO2Q8NC67 525 aa5.37□□□□□ -1.55
SSR3-204ENST00000467733 SLC16A11Q8NCK7 471 aa5.37□□□□□ -1.55
SSR3-204ENST00000467733 SMARCC2Q8TAQ2 1214 aa5.37□□□□□ -1.55
SSR3-204ENST00000467733 PEX11GQ96HA9 241 aa5.37□□□□□ -1.55
SSR3-204ENST00000467733 LOXL4Q96JB6 756 aa5.37□□□□□ -1.55
SSR3-204ENST00000467733 HTATIP2Q9BUP3 242 aa5.37□□□□□ -1.55
SSR3-204ENST00000467733 KRTAP3-1Q9BYR8 98 aa5.37□□□□□ -1.55
SSR3-204ENST00000467733 GP6Q9HCN6 339 aa5.37□□□□□ -1.55
SSR3-204ENST00000467733 MIS18AQ9NYP9 233 aa5.37□□□□□ -1.55
SSR3-204ENST00000467733 DNAH12Q6ZR08 3092 aa5.37□□□□□ -1.55
SSR3-204ENST00000467733 WNT10BO00744 389 aa5.36□□□□□ -1.55
SSR3-204ENST00000467733 SMARCA5O60264 1052 aaPredicted RBP5.36□□□□□ -1.55
SSR3-204ENST00000467733 MMP14P50281 582 aa5.36□□□□□ -1.55
SSR3-204ENST00000467733 ZNF445P59923 1031 aa5.36□□□□□ -1.55
SSR3-204ENST00000467733 POU4F1Q01851 419 aa5.36□□□□□ -1.55
SSR3-204ENST00000467733 CACNB2Q08289 660 aaPredicted RBP5.36□□□□□ -1.55
SSR3-204ENST00000467733 PRKG1Q13976 671 aa5.36□□□□□ -1.55
SSR3-204ENST00000467733 PROSER3Q2NL68 480 aa5.36□□□□□ -1.55
SSR3-204ENST00000467733 UBE2Q1Q7Z7E8 422 aa5.36□□□□□ -1.55
SSR3-204ENST00000467733 VPS37DQ86XT2 251 aa5.36□□□□□ -1.55
SSR3-204ENST00000467733 FIBCD1Q8N539 461 aa5.36□□□□□ -1.55
SSR3-204ENST00000467733 RASGRP4Q8TDF6 673 aa5.36□□□□□ -1.55
SSR3-204ENST00000467733 ADAMTS17Q8TE56 1095 aa5.36□□□□□ -1.55
SSR3-204ENST00000467733 DPF3Q92784 378 aa5.36□□□□□ -1.55
SSR3-204ENST00000467733 CLMNQ96JQ2 1002 aa5.36□□□□□ -1.55
SSR3-204ENST00000467733 CFAP53Q96M91 514 aa5.36□□□□□ -1.55
SSR3-204ENST00000467733 C8orf49Q96NF6 230 aa5.36□□□□□ -1.55
SSR3-204ENST00000467733 FCRL3Q96P31 734 aaPredicted RBP5.36□□□□□ -1.55
SSR3-204ENST00000467733 THUMPD2Q9BTF0 503 aaKnown RBP5.36□□□□□ -1.55
SSR3-204ENST00000467733 EFR3BQ9Y2G0 817 aa5.36□□□□□ -1.55
SSR3-204ENST00000467733 STXBP5LQ9Y2K9 1186 aa5.36□□□□□ -1.55
SSR3-204ENST00000467733 NR2E3Q9Y5X4 410 aa5.36□□□□□ -1.55
SSR3-204ENST00000467733 MYO3BQ8WXR4 1341 aa5.36□□□□□ -1.55
SSR3-204ENST00000467733 A0A1B0GUL6 1792 aa5.36□□□□□ -1.55
SSR3-204ENST00000467733 MED23Q9ULK4 1368 aa5.35□□□□□ -1.55
SSR3-204ENST00000467733 XDHP47989 1333 aa5.35□□□□□ -1.55
SSR3-204ENST00000467733 FSHBP01225 129 aa5.35□□□□□ -1.55
SSR3-204ENST00000467733 CD3EP07766 207 aa5.35□□□□□ -1.55
SSR3-204ENST00000467733 ITGA4P13612 1032 aa5.35□□□□□ -1.55
SSR3-204ENST00000467733 GJA8P48165 433 aa5.35□□□□□ -1.55
SSR3-204ENST00000467733 RPS8P62241 208 aaKnown RBP5.35□□□□□ -1.55
SSR3-204ENST00000467733 RCSD1Q6JBY9 416 aa5.35□□□□□ -1.55
SSR3-204ENST00000467733 SH3TC2Q8TF17 1288 aa5.35□□□□□ -1.55
SSR3-204ENST00000467733 CPLX3Q8WVH0 158 aa5.35□□□□□ -1.55
SSR3-204ENST00000467733 DVL3Q92997 716 aaPredicted RBP5.35□□□□□ -1.55
SSR3-204ENST00000467733 ZBTB8AQ96BR9 441 aa5.35□□□□□ -1.55
SSR3-204ENST00000467733 ZBED3Q96IU2 234 aaPredicted RBP5.35□□□□□ -1.55
SSR3-204ENST00000467733 SORCS2Q96PQ0 1159 aa5.35□□□□□ -1.55
SSR3-204ENST00000467733 PTPN18Q99952 460 aa5.35□□□□□ -1.55
SSR3-204ENST00000467733 CAPN10Q9HC96 672 aa5.35□□□□□ -1.55
SSR3-204ENST00000467733 PCDH18Q9HCL0 1135 aa5.35□□□□□ -1.55
SSR3-204ENST00000467733 GINM1Q9NU53 330 aa5.35□□□□□ -1.55
SSR3-204ENST00000467733 PPT2Q9UMR5 302 aa5.35□□□□□ -1.55
SSR3-204ENST00000467733 NUDCQ9Y266 331 aa5.35□□□□□ -1.55
SSR3-204ENST00000467733 PPP2R3BQ9Y5P8 575 aa5.35□□□□□ -1.55
SSR3-204ENST00000467733 BDP1A6H8Y1 2624 aa5.34□□□□□ -1.55
SSR3-204ENST00000467733 PIEZO1Q92508 2521 aa5.34□□□□□ -1.55
SSR3-204ENST00000467733 FAM86C2PA6NEL3 165 aa5.34□□□□□ -1.55
SSR3-204ENST00000467733 ANXA1P04083 346 aa5.34□□□□□ -1.55
SSR3-204ENST00000467733 U2AF1L5P0DN76 240 aaPredicted RBP5.34□□□□□ -1.55
SSR3-204ENST00000467733 ACRP10323 421 aa5.34□□□□□ -1.55
SSR3-204ENST00000467733 IFNGR1P15260 489 aa5.34□□□□□ -1.55
SSR3-204ENST00000467733 CD247P20963 164 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms