RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 GDF6Q6KF10 455 aaPredicted RBP7.58□□□□□ -1.2
SCAF4-204ENST00000467731 LINC01465Q8N7H1 131 aa7.58□□□□□ -1.2
SCAF4-204ENST00000467731 TRIML1Q8N9V2 468 aa7.58□□□□□ -1.2
SCAF4-204ENST00000467731 KIAA0895Q8NCT3 520 aa7.58□□□□□ -1.2
SCAF4-204ENST00000467731 GLIS3Q8NEA6 775 aa7.58□□□□□ -1.2
SCAF4-204ENST00000467731 BSNDQ8WZ55 320 aa7.58□□□□□ -1.2
SCAF4-204ENST00000467731 CCDC47Q96A33 483 aaKnown RBP7.58□□□□□ -1.2
SCAF4-204ENST00000467731 FIZ1Q96SL8 496 aa7.58□□□□□ -1.2
SCAF4-204ENST00000467731 FUCA2Q9BTY2 467 aa7.58□□□□□ -1.2
SCAF4-204ENST00000467731 FGFBP2Q9BYJ0 223 aa7.58□□□□□ -1.2
SCAF4-204ENST00000467731 SLC39A2Q9NP94 309 aa7.58□□□□□ -1.2
SCAF4-204ENST00000467731 OLFML3Q9NRN5 406 aa7.58□□□□□ -1.2
SCAF4-204ENST00000467731 GDAQ9Y2T3 454 aa7.58□□□□□ -1.2
SCAF4-204ENST00000467731 PCDHA2Q9Y5H9 948 aa7.58□□□□□ -1.2
SCAF4-204ENST00000467731 DYNC1I1O14576 645 aa7.57□□□□□ -1.2
SCAF4-204ENST00000467731 GNAT1P11488 350 aa7.57□□□□□ -1.2
SCAF4-204ENST00000467731 PLS3P13797 630 aa7.57□□□□□ -1.2
SCAF4-204ENST00000467731 ARL2P36404 184 aa7.57□□□□□ -1.2
SCAF4-204ENST00000467731 PEX3P56589 373 aa7.57□□□□□ -1.2
SCAF4-204ENST00000467731 DMP1Q13316 513 aaPredicted RBP7.57□□□□□ -1.2
SCAF4-204ENST00000467731 FAM26FQ5R3K3 315 aa7.57□□□□□ -1.2
SCAF4-204ENST00000467731 ZNF658Q5TYW1 1059 aaPredicted RBP7.57□□□□□ -1.2
SCAF4-204ENST00000467731 SESTD1Q86VW0 696 aa7.57□□□□□ -1.2
SCAF4-204ENST00000467731 FAM178BQ8IXR5 827 aa7.57□□□□□ -1.2
SCAF4-204ENST00000467731 PRPF31Q8WWY3 499 aaKnown RBP7.57□□□□□ -1.2
SCAF4-204ENST00000467731 TMEM106CQ9BVX2 250 aa7.57□□□□□ -1.2
SCAF4-204ENST00000467731 SENP6Q9GZR1 1112 aaPredicted RBP7.57□□□□□ -1.2
SCAF4-204ENST00000467731 MRPL44Q9H9J2 332 aaKnown RBP7.57□□□□□ -1.2
SCAF4-204ENST00000467731 SH3BP1Q9Y3L3 701 aa7.57□□□□□ -1.2
SCAF4-204ENST00000467731 FSD2A1L4K1 749 aa7.57□□□□□ -1.2
SCAF4-204ENST00000467731 VTNP04004 478 aa7.57□□□□□ -1.2
SCAF4-204ENST00000467731 CCDC192P0DO97 292 aa7.57□□□□□ -1.2
SCAF4-204ENST00000467731 CYP2C9P11712 490 aa7.57□□□□□ -1.2
SCAF4-204ENST00000467731 GAP43P17677 238 aa7.57□□□□□ -1.2
SCAF4-204ENST00000467731 GLRA2P23416 452 aa7.57□□□□□ -1.2
SCAF4-204ENST00000467731 TMOD1P28289 359 aa7.57□□□□□ -1.2
SCAF4-204ENST00000467731 NPTX2P47972 431 aa7.57□□□□□ -1.2
SCAF4-204ENST00000467731 DNM2P50570 870 aa7.57□□□□□ -1.2
SCAF4-204ENST00000467731 CASP5P51878 434 aa7.57□□□□□ -1.2
SCAF4-204ENST00000467731 NLRP12P59046 1061 aa7.57□□□□□ -1.2
SCAF4-204ENST00000467731 ZNF445P59923 1031 aa7.57□□□□□ -1.2
SCAF4-204ENST00000467731 IER5Q5VY09 327 aa7.57□□□□□ -1.2
SCAF4-204ENST00000467731 LRSAM1Q6UWE0 723 aa7.57□□□□□ -1.2
SCAF4-204ENST00000467731 RUFY4Q6ZNE9 571 aa7.57□□□□□ -1.2
SCAF4-204ENST00000467731 RHPN2Q8IUC4 686 aa7.57□□□□□ -1.2
SCAF4-204ENST00000467731 KSR1Q8IVT5 923 aa7.57□□□□□ -1.2
SCAF4-204ENST00000467731 ASAP3Q8TDY4 903 aa7.57□□□□□ -1.2
SCAF4-204ENST00000467731 DIS3LQ8TF46 1054 aaKnown RBP7.57□□□□□ -1.2
SCAF4-204ENST00000467731 TCP11Q8WWU5 503 aa7.57□□□□□ -1.2
SCAF4-204ENST00000467731 PSPC1Q8WXF1 523 aaKnown RBP7.57□□□□□ -1.2
SCAF4-204ENST00000467731 KIFC3Q9BVG8 833 aa7.57□□□□□ -1.2
SCAF4-204ENST00000467731 FAM49AQ9H0Q0 323 aaPredicted RBP7.57□□□□□ -1.2
SCAF4-204ENST00000467731 C17orf75Q9HAS0 396 aa7.57□□□□□ -1.2
SCAF4-204ENST00000467731 SUCLA2Q9P2R7 463 aaPredicted RBP7.57□□□□□ -1.2
SCAF4-204ENST00000467731 SEL1LQ9UBV2 794 aa7.57□□□□□ -1.2
SCAF4-204ENST00000467731 MAPK8IP1Q9UQF2 711 aa7.57□□□□□ -1.2
SCAF4-204ENST00000467731 AKT3Q9Y243 479 aa7.57□□□□□ -1.2
SCAF4-204ENST00000467731 SMIM35A0A1B0GVV1 85 aa7.56□□□□□ -1.2
SCAF4-204ENST00000467731 NMT1P30419 496 aaKnown RBP7.56□□□□□ -1.2
SCAF4-204ENST00000467731 RTP1P59025 263 aa7.56□□□□□ -1.2
SCAF4-204ENST00000467731 LAMTOR4Q0VGL1 99 aa7.56□□□□□ -1.2
SCAF4-204ENST00000467731 PSMD2Q13200 908 aa7.56□□□□□ -1.2
SCAF4-204ENST00000467731 STX1AQ16623 288 aa7.56□□□□□ -1.2
SCAF4-204ENST00000467731 KIAA0319LQ8IZA0 1049 aa7.56□□□□□ -1.2
SCAF4-204ENST00000467731 GPATCH11Q8N954 259 aa7.56□□□□□ -1.2
SCAF4-204ENST00000467731 ZNF668Q96K58 619 aaPredicted RBP7.56□□□□□ -1.2
SCAF4-204ENST00000467731 IFT74Q96LB3 600 aa7.56□□□□□ -1.2
SCAF4-204ENST00000467731 PPP1R16BQ96T49 567 aa7.56□□□□□ -1.2
SCAF4-204ENST00000467731 TRMT13Q9NUP7 481 aaKnown RBP7.56□□□□□ -1.2
SCAF4-204ENST00000467731 ADGRA3Q8IWK6 1321 aa7.56□□□□□ -1.2
SCAF4-204ENST00000467731 SIP14410 1827 aa7.56□□□□□ -1.2
SCAF4-204ENST00000467731 LRRIQ4A6NIV6 560 aa7.56□□□□□ -1.2
SCAF4-204ENST00000467731 CCDC169A6NNP5 214 aa7.56□□□□□ -1.2
SCAF4-204ENST00000467731 K7ENM7 598 aa7.56□□□□□ -1.2
SCAF4-204ENST00000467731 ARVCFO00192 962 aa7.56□□□□□ -1.2
SCAF4-204ENST00000467731 SLC16A4O15374 487 aa7.56□□□□□ -1.2
SCAF4-204ENST00000467731 GCNT3O95395 438 aa7.56□□□□□ -1.2
SCAF4-204ENST00000467731 CD44P16070 742 aaKnown RBP7.56□□□□□ -1.2
SCAF4-204ENST00000467731 PRCPP42785 496 aa7.56□□□□□ -1.2
SCAF4-204ENST00000467731 SMTNP53814 917 aa7.56□□□□□ -1.2
SCAF4-204ENST00000467731 NCKAP1LP55160 1127 aa7.56□□□□□ -1.2
SCAF4-204ENST00000467731 TMEM62Q0P6H9 643 aa7.56□□□□□ -1.2
SCAF4-204ENST00000467731 CAPSQ13938 189 aa7.56□□□□□ -1.2
SCAF4-204ENST00000467731 MXD4Q14582 209 aaPredicted RBP7.56□□□□□ -1.2
SCAF4-204ENST00000467731 PTGISQ16647 500 aa7.56□□□□□ -1.2
SCAF4-204ENST00000467731 ANO6Q4KMQ2 910 aa7.56□□□□□ -1.2
SCAF4-204ENST00000467731 ZC2HC1CQ53FD0 456 aaPredicted RBP7.56□□□□□ -1.2
SCAF4-204ENST00000467731 C11orf57Q6ZUT1 292 aaPredicted RBP7.56□□□□□ -1.2
SCAF4-204ENST00000467731 ZNF720Q7Z2F6 126 aa7.56□□□□□ -1.2
SCAF4-204ENST00000467731 SLC43A3Q8NBI5 491 aa7.56□□□□□ -1.2
SCAF4-204ENST00000467731 RNF149Q8NC42 400 aa7.56□□□□□ -1.2
SCAF4-204ENST00000467731 DNAJB3Q8WWF6 145 aa7.56□□□□□ -1.2
SCAF4-204ENST00000467731 NLRP4Q96MN2 994 aa7.56□□□□□ -1.2
SCAF4-204ENST00000467731 CTAGE1Q96RT6 745 aa7.56□□□□□ -1.2
SCAF4-204ENST00000467731 DNAJC25Q9H1X3 360 aa7.56□□□□□ -1.2
SCAF4-204ENST00000467731 KMT5AQ9NQR1 393 aa7.56□□□□□ -1.2
SCAF4-204ENST00000467731 ANO10Q9NW15 660 aa7.56□□□□□ -1.2
SCAF4-204ENST00000467731 B4GALT4O60513 344 aa7.56□□□□□ -1.2
SCAF4-204ENST00000467731 SRGAP2CP0DJJ0 459 aa7.56□□□□□ -1.2
SCAF4-204ENST00000467731 MYBP10242 640 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms