RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, human

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNS-205	ENST00000467663	HAS1	Q92839	578 aa		13.42	□□□□□ -0.26
CTNS-205	ENST00000467663	GJA10	Q969M2	543 aa		13.42	□□□□□ -0.26
CTNS-205	ENST00000467663	ZNF689	Q96CS4	500 aa	Predicted RBP	13.42	□□□□□ -0.26
CTNS-205	ENST00000467663	CDHR5	Q9HBB8	845 aa		13.42	□□□□□ -0.26
CTNS-205	ENST00000467663	RC3H2	Q9HBD1	1191 aa	Known RBP	13.42	□□□□□ -0.26
CTNS-205	ENST00000467663	NRBP2	Q9NSY0	501 aa		13.42	□□□□□ -0.26
CTNS-205	ENST00000467663	LRWD1	Q9UFC0	647 aa		13.42	□□□□□ -0.26
CTNS-205	ENST00000467663	TRANK1	O15050	2925 aa		13.42	□□□□□ -0.26
CTNS-205	ENST00000467663	PRRC2B	Q5JSZ5	2229 aa	Known RBP	13.41	□□□□□ -0.26
CTNS-205	ENST00000467663	CHMP2A	O43633	222 aa		13.41	□□□□□ -0.26
CTNS-205	ENST00000467663	OAT	P04181	439 aa		13.41	□□□□□ -0.26
CTNS-205	ENST00000467663	SLFN14	P0C7P3	912 aa		13.41	□□□□□ -0.26
CTNS-205	ENST00000467663	TEC	P42680	631 aa		13.41	□□□□□ -0.26
CTNS-205	ENST00000467663	CRYBB1	P53674	252 aa	Predicted RBP	13.41	□□□□□ -0.26
CTNS-205	ENST00000467663	PAK2	Q13177	524 aa		13.41	□□□□□ -0.26
CTNS-205	ENST00000467663	IL17A	Q16552	155 aa		13.41	□□□□□ -0.26
CTNS-205	ENST00000467663	UGCG	Q16739	394 aa		13.41	□□□□□ -0.26
CTNS-205	ENST00000467663	HYI	Q5T013	277 aa		13.41	□□□□□ -0.26
CTNS-205	ENST00000467663	KRBA2	Q6ZNG9	492 aa		13.41	□□□□□ -0.26
CTNS-205	ENST00000467663	TRMT1L	Q7Z2T5	733 aa	Known RBP	13.41	□□□□□ -0.26
CTNS-205	ENST00000467663	CABP7	Q86V35	215 aa		13.41	□□□□□ -0.26
CTNS-205	ENST00000467663	TMEM192	Q8IY95	271 aa		13.41	□□□□□ -0.26
CTNS-205	ENST00000467663	LINC01465	Q8N7H1	131 aa		13.41	□□□□□ -0.26
CTNS-205	ENST00000467663	CNNM3	Q8NE01	707 aa		13.41	□□□□□ -0.26
CTNS-205	ENST00000467663	NEK9	Q8TD19	979 aa		13.41	□□□□□ -0.26
CTNS-205	ENST00000467663	TMEM40	Q8WWA1	233 aa		13.41	□□□□□ -0.26
CTNS-205	ENST00000467663	LRRC27	Q9C0I9	530 aa		13.41	□□□□□ -0.26
CTNS-205	ENST00000467663	TMX1	Q9H3N1	280 aa		13.41	□□□□□ -0.26
CTNS-205	ENST00000467663	ERVK-5	Q9HDB9	667 aa		13.41	□□□□□ -0.26
CTNS-205	ENST00000467663	STK17A	Q9UEE5	414 aa		13.41	□□□□□ -0.26
CTNS-205	ENST00000467663		H3BNC9	293 aa		13.4	□□□□□ -0.26
CTNS-205	ENST00000467663	POLR2D	O15514	142 aa	Known RBP	13.4	□□□□□ -0.26
CTNS-205	ENST00000467663	GPR32	O75388	356 aa		13.4	□□□□□ -0.26
CTNS-205	ENST00000467663	RPS6KA5	O75582	802 aa		13.4	□□□□□ -0.26
CTNS-205	ENST00000467663	DGKI	O75912	1065 aa		13.4	□□□□□ -0.26
CTNS-205	ENST00000467663	LINC00271	P0C7V0	271 aa		13.4	□□□□□ -0.26
CTNS-205	ENST00000467663	AMPD3	Q01432	767 aa		13.4	□□□□□ -0.26
CTNS-205	ENST00000467663	PRKCE	Q02156	737 aa		13.4	□□□□□ -0.26
CTNS-205	ENST00000467663	GRIN1	Q05586	938 aa		13.4	□□□□□ -0.26
CTNS-205	ENST00000467663	PPP2R5C	Q13362	524 aa		13.4	□□□□□ -0.26
CTNS-205	ENST00000467663	SKIV2L	Q15477	1246 aa	Known RBP	13.4	□□□□□ -0.26
CTNS-205	ENST00000467663	ODR4	Q5SWX8	454 aa		13.4	□□□□□ -0.26
CTNS-205	ENST00000467663	LRSAM1	Q6UWE0	723 aa		13.4	□□□□□ -0.26
CTNS-205	ENST00000467663	MIER3	Q7Z3K6	550 aa		13.4	□□□□□ -0.26
CTNS-205	ENST00000467663	NPAS4	Q8IUM7	802 aa		13.4	□□□□□ -0.26
CTNS-205	ENST00000467663	ZNF710	Q8N1W2	664 aa		13.4	□□□□□ -0.26
CTNS-205	ENST00000467663	FIBCD1	Q8N539	461 aa		13.4	□□□□□ -0.26
CTNS-205	ENST00000467663	METTL13	Q8N6R0	699 aa		13.4	□□□□□ -0.26
CTNS-205	ENST00000467663	EPSTI1	Q96J88	318 aa		13.4	□□□□□ -0.26
CTNS-205	ENST00000467663	GTPBP4	Q9BZE4	634 aa	Known RBP	13.4	□□□□□ -0.26
CTNS-205	ENST00000467663	COG5	Q9UP83	839 aa		13.4	□□□□□ -0.26
CTNS-205	ENST00000467663	NOC2L	Q9Y3T9	749 aa	Known RBP	13.4	□□□□□ -0.26
CTNS-205	ENST00000467663	COL4A4	P53420	1690 aa	Predicted RBP	13.4	□□□□□ -0.26
CTNS-205	ENST00000467663	ADGRA3	Q8IWK6	1321 aa		13.39	□□□□□ -0.27
CTNS-205	ENST00000467663	C5orf67	F2Z3F1	127 aa		13.39	□□□□□ -0.27
CTNS-205	ENST00000467663	GPR182	O15218	404 aa		13.39	□□□□□ -0.27
CTNS-205	ENST00000467663	STBD1	O95210	358 aa		13.39	□□□□□ -0.27
CTNS-205	ENST00000467663	CCDC192	P0DO97	292 aa		13.39	□□□□□ -0.27
CTNS-205	ENST00000467663	TMOD1	P28289	359 aa		13.39	□□□□□ -0.27
CTNS-205	ENST00000467663	TARBP2	Q15633	366 aa	Known RBP	13.39	□□□□□ -0.27
CTNS-205	ENST00000467663	ZRSR1	Q15695	479 aa	Known RBP	13.39	□□□□□ -0.27
CTNS-205	ENST00000467663	AAK1	Q2M2I8	961 aa		13.39	□□□□□ -0.27
CTNS-205	ENST00000467663	KIZ	Q2M2Z5	673 aa		13.39	□□□□□ -0.27
CTNS-205	ENST00000467663	XKR3	Q5GH77	459 aa		13.39	□□□□□ -0.27
CTNS-205	ENST00000467663	RRAGB	Q5VZM2	374 aa		13.39	□□□□□ -0.27
CTNS-205	ENST00000467663	EFCAB12	Q6NXP0	572 aa		13.39	□□□□□ -0.27
CTNS-205	ENST00000467663	RASSF8	Q8NHQ8	419 aa		13.39	□□□□□ -0.27
CTNS-205	ENST00000467663	CLP1	Q92989	425 aa	Known RBP	13.39	□□□□□ -0.27
CTNS-205	ENST00000467663	MRPL38	Q96DV4	380 aa	Known RBP	13.39	□□□□□ -0.27
CTNS-205	ENST00000467663	CDK5RAP3	Q96JB5	506 aa		13.39	□□□□□ -0.27
CTNS-205	ENST00000467663	NIFK	Q9BYG3	293 aa	Known RBP	13.39	□□□□□ -0.27
CTNS-205	ENST00000467663	ST3GAL5	Q9UNP4	418 aa		13.39	□□□□□ -0.27
CTNS-205	ENST00000467663	GINS2	Q9Y248	185 aa		13.39	□□□□□ -0.27
CTNS-205	ENST00000467663	RWDD3	Q9Y3V2	267 aa		13.39	□□□□□ -0.27
CTNS-205	ENST00000467663	TTC3	P53804	2025 aa		13.39	□□□□□ -0.27
CTNS-205	ENST00000467663	SMC2	O95347	1197 aa		13.38	□□□□□ -0.27
CTNS-205	ENST00000467663	VTN	P04004	478 aa		13.38	□□□□□ -0.27
CTNS-205	ENST00000467663	RB1	P06400	928 aa		13.38	□□□□□ -0.27
CTNS-205	ENST00000467663	STAG3L1	P0CL83	205 aa		13.38	□□□□□ -0.27
CTNS-205	ENST00000467663	RPA1	P27694	616 aa		13.38	□□□□□ -0.27
CTNS-205	ENST00000467663	BMPR1A	P36894	532 aa		13.38	□□□□□ -0.27
CTNS-205	ENST00000467663	STAT6	P42226	847 aa		13.38	□□□□□ -0.27
CTNS-205	ENST00000467663	SARS	P49591	514 aa	Known RBP	13.38	□□□□□ -0.27
CTNS-205	ENST00000467663	CLCN3	P51790	818 aa		13.38	□□□□□ -0.27
CTNS-205	ENST00000467663	TFF2	Q03403	129 aa		13.38	□□□□□ -0.27
CTNS-205	ENST00000467663	NFX1	Q12986	1120 aa	Known RBP	13.38	□□□□□ -0.27
CTNS-205	ENST00000467663	GPM6B	Q13491	265 aa		13.38	□□□□□ -0.27
CTNS-205	ENST00000467663	BTG3	Q14201	252 aa	Predicted RBP	13.38	□□□□□ -0.27
CTNS-205	ENST00000467663	GSE1	Q14687	1217 aa		13.38	□□□□□ -0.27
CTNS-205	ENST00000467663	PTPRO	Q16827	1216 aa		13.38	□□□□□ -0.27
CTNS-205	ENST00000467663	TPRN	Q4KMQ1	711 aa		13.38	□□□□□ -0.27
CTNS-205	ENST00000467663	SPECC1	Q5M775	1068 aa		13.38	□□□□□ -0.27
CTNS-205	ENST00000467663	SASS6	Q6UVJ0	657 aa		13.38	□□□□□ -0.27
CTNS-205	ENST00000467663	FAM228A	Q86W67	206 aa		13.38	□□□□□ -0.27
CTNS-205	ENST00000467663	CMTR2	Q8IYT2	770 aa	Known RBP	13.38	□□□□□ -0.27
CTNS-205	ENST00000467663	TRIML1	Q8N9V2	468 aa		13.38	□□□□□ -0.27
CTNS-205	ENST00000467663	HLA-C	Q95604	372 aa		13.38	□□□□□ -0.27
CTNS-205	ENST00000467663	CEP89	Q96ST8	783 aa		13.38	□□□□□ -0.27
CTNS-205	ENST00000467663	MAP7D2	Q96T17	732 aa		13.38	□□□□□ -0.27
CTNS-205	ENST00000467663	OSMR	Q99650	979 aa		13.38	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms