RNA–Protein interactions for RNA: ENST00000467343.1

CRAT-209, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 5

Gene CRAT, Length 399 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-209ENST00000467343 NEK9Q8TD19 979 aa13.79□□□□□ -0.2
CRAT-209ENST00000467343 MICAL1Q8TDZ2 1067 aa13.79□□□□□ -0.2
CRAT-209ENST00000467343 TCP11Q8WWU5 503 aa13.79□□□□□ -0.2
CRAT-209ENST00000467343 PSPC1Q8WXF1 523 aaKnown RBP13.79□□□□□ -0.2
CRAT-209ENST00000467343 PPP2R3CQ969Q6 453 aa13.79□□□□□ -0.2
CRAT-209ENST00000467343 TMEM143Q96AN5 459 aa13.79□□□□□ -0.2
CRAT-209ENST00000467343 UHRF1Q96T88 793 aaPredicted RBP13.79□□□□□ -0.2
CRAT-209ENST00000467343 MTRQ99707 1265 aa13.79□□□□□ -0.2
CRAT-209ENST00000467343 NSUN3Q9H649 340 aaKnown RBP13.79□□□□□ -0.2
CRAT-209ENST00000467343 IGFLR1Q9H665 355 aa13.79□□□□□ -0.2
CRAT-209ENST00000467343 ALG13Q9NP73 1137 aaKnown RBP13.79□□□□□ -0.2
CRAT-209ENST00000467343 TMEM161AQ9NX61 479 aa13.79□□□□□ -0.2
CRAT-209ENST00000467343 DACT1Q9NYF0 836 aa13.79□□□□□ -0.2
CRAT-209ENST00000467343 PIN4Q9Y237 131 aaKnown RBP13.79□□□□□ -0.2
CRAT-209ENST00000467343 TTC3P53804 2025 aa13.79□□□□□ -0.2
CRAT-209ENST00000467343 COL4A6Q14031 1691 aa13.79□□□□□ -0.2
CRAT-209ENST00000467343 KCNA5P22460 613 aa13.78□□□□□ -0.2
CRAT-209ENST00000467343 CA8P35219 290 aa13.78□□□□□ -0.2
CRAT-209ENST00000467343 RESTQ13127 1097 aa13.78□□□□□ -0.2
CRAT-209ENST00000467343 EMC2Q15006 297 aa13.78□□□□□ -0.2
CRAT-209ENST00000467343 TCEAL5Q5H9L2 206 aa13.78□□□□□ -0.2
CRAT-209ENST00000467343 TTC38Q5R3I4 469 aa13.78□□□□□ -0.2
CRAT-209ENST00000467343 FAM102BQ5T8I3 360 aa13.78□□□□□ -0.2
CRAT-209ENST00000467343 FAM43BQ6ZT52 329 aaPredicted RBP13.78□□□□□ -0.2
CRAT-209ENST00000467343 ZNF410Q86VK4 478 aa13.78□□□□□ -0.2
CRAT-209ENST00000467343 KSR1Q8IVT5 923 aa13.78□□□□□ -0.2
CRAT-209ENST00000467343 C4orf19Q8IY42 314 aa13.78□□□□□ -0.2
CRAT-209ENST00000467343 THNSL1Q8IYQ7 743 aa13.78□□□□□ -0.2
CRAT-209ENST00000467343 LINC01465Q8N7H1 131 aa13.78□□□□□ -0.2
CRAT-209ENST00000467343 ERMNQ8TAM6 284 aa13.78□□□□□ -0.2
CRAT-209ENST00000467343 PLVAPQ9BX97 442 aa13.78□□□□□ -0.2
CRAT-209ENST00000467343 LMAN2LQ9H0V9 348 aa13.78□□□□□ -0.2
CRAT-209ENST00000467343 FOXP1Q9H334 677 aaPredicted RBP13.78□□□□□ -0.2
CRAT-209ENST00000467343 PPME1Q9Y570 386 aa13.78□□□□□ -0.2
CRAT-209ENST00000467343 COL4A3BPQ9Y5P4 624 aa13.78□□□□□ -0.2
CRAT-209ENST00000467343 POTEMA6NI47 508 aa13.77□□□□□ -0.21
CRAT-209ENST00000467343 C9IYK1 514 aa13.77□□□□□ -0.21
CRAT-209ENST00000467343 C5orf67F2Z3F1 127 aa13.77□□□□□ -0.21
CRAT-209ENST00000467343 GRM6O15303 877 aa13.77□□□□□ -0.21
CRAT-209ENST00000467343 GAS2O43903 313 aaKnown RBP13.77□□□□□ -0.21
CRAT-209ENST00000467343 ERLIN2O94905 339 aa13.77□□□□□ -0.21
CRAT-209ENST00000467343 STBD1O95210 358 aa13.77□□□□□ -0.21
CRAT-209ENST00000467343 OR52Z1P0C646 297 aa13.77□□□□□ -0.21
CRAT-209ENST00000467343 TECP42680 631 aa13.77□□□□□ -0.21
CRAT-209ENST00000467343 LONRF3Q496Y0 759 aa13.77□□□□□ -0.21
CRAT-209ENST00000467343 PRRC2BQ5JSZ5 2229 aaKnown RBP13.77□□□□□ -0.21
CRAT-209ENST00000467343 ECHDC2Q86YB7 292 aa13.77□□□□□ -0.21
CRAT-209ENST00000467343 KLHL23Q8NBE8 558 aa13.77□□□□□ -0.21
CRAT-209ENST00000467343 CLP1Q92989 425 aaKnown RBP13.77□□□□□ -0.21
CRAT-209ENST00000467343 UBE2ZQ9H832 354 aaPredicted RBP13.77□□□□□ -0.21
CRAT-209ENST00000467343 RC3H2Q9HBD1 1191 aaKnown RBP13.77□□□□□ -0.21
CRAT-209ENST00000467343 CLDND1Q9NY35 253 aa13.77□□□□□ -0.21
CRAT-209ENST00000467343 WRAP73Q9P2S5 460 aaPredicted RBP13.77□□□□□ -0.21
CRAT-209ENST00000467343 KIAA1671Q9BY89 1806 aa13.76□□□□□ -0.21
CRAT-209ENST00000467343 TNFRSF10AO00220 468 aa13.76□□□□□ -0.21
CRAT-209ENST00000467343 WNT7AO00755 349 aa13.76□□□□□ -0.21
CRAT-209ENST00000467343 USO1O60763 962 aaKnown RBP13.76□□□□□ -0.21
CRAT-209ENST00000467343 SKIP12755 728 aa13.76□□□□□ -0.21
CRAT-209ENST00000467343 LAG3P18627 525 aa13.76□□□□□ -0.21
CRAT-209ENST00000467343 NCBP1Q09161 790 aaKnown RBP13.76□□□□□ -0.21
CRAT-209ENST00000467343 TFDP1Q14186 410 aa13.76□□□□□ -0.21
CRAT-209ENST00000467343 NFKBIBQ15653 356 aa13.76□□□□□ -0.21
CRAT-209ENST00000467343 TMEM132AQ24JP5 1023 aa13.76□□□□□ -0.21
CRAT-209ENST00000467343 FAM173BQ6P4H8 233 aa13.76□□□□□ -0.21
CRAT-209ENST00000467343 MAEAQ7L5Y9 396 aa13.76□□□□□ -0.21
CRAT-209ENST00000467343 NOSTRINQ8IVI9 506 aa13.76□□□□□ -0.21
CRAT-209ENST00000467343 ZNF579Q8NAF0 562 aaKnown RBP13.76□□□□□ -0.21
CRAT-209ENST00000467343 RNF149Q8NC42 400 aa13.76□□□□□ -0.21
CRAT-209ENST00000467343 FBXO18Q8NFZ0 1043 aa13.76□□□□□ -0.21
CRAT-209ENST00000467343 POF1BQ8WVV4 589 aa13.76□□□□□ -0.21
CRAT-209ENST00000467343 TMEM117Q9H0C3 514 aa13.76□□□□□ -0.21
CRAT-209ENST00000467343 TMEM60Q9H2L4 133 aa13.76□□□□□ -0.21
CRAT-209ENST00000467343 ELAC1Q9H777 363 aaKnown RBP13.76□□□□□ -0.21
CRAT-209ENST00000467343 TYW1Q9NV66 732 aaKnown RBP13.76□□□□□ -0.21
CRAT-209ENST00000467343 TCF20Q9UGU0 1960 aaKnown RBP13.75□□□□□ -0.21
CRAT-209ENST00000467343 IGKV6-21A0A0C4DH24 114 aa13.75□□□□□ -0.21
CRAT-209ENST00000467343 ZBTB39O15060 712 aa13.75□□□□□ -0.21
CRAT-209ENST00000467343 SLITRK3O94933 977 aa13.75□□□□□ -0.21
CRAT-209ENST00000467343 PHKA2P46019 1235 aa13.75□□□□□ -0.21
CRAT-209ENST00000467343 SPIRE1Q08AE8 756 aa13.75□□□□□ -0.21
CRAT-209ENST00000467343 LAMTOR4Q0VGL1 99 aa13.75□□□□□ -0.21
CRAT-209ENST00000467343 DSC3Q14574 896 aa13.75□□□□□ -0.21
CRAT-209ENST00000467343 NAALADL2Q58DX5 795 aa13.75□□□□□ -0.21
CRAT-209ENST00000467343 LRRC43Q8N309 656 aa13.75□□□□□ -0.21
CRAT-209ENST00000467343 HELQQ8TDG4 1101 aa13.75□□□□□ -0.21
CRAT-209ENST00000467343 PIGOQ8TEQ8 1089 aa13.75□□□□□ -0.21
CRAT-209ENST00000467343 PRPF31Q8WWY3 499 aaKnown RBP13.75□□□□□ -0.21
CRAT-209ENST00000467343 P2RX5Q93086 422 aa13.75□□□□□ -0.21
CRAT-209ENST00000467343 NECAB3Q96P71 396 aaPredicted RBP13.75□□□□□ -0.21
CRAT-209ENST00000467343 GBP4Q96PP9 640 aa13.75□□□□□ -0.21
CRAT-209ENST00000467343 PLAGL2Q9UPG8 496 aa13.75□□□□□ -0.21
CRAT-209ENST00000467343 INPP5FQ9Y2H2 1132 aa13.75□□□□□ -0.21
CRAT-209ENST00000467343 ARID2Q68CP9 1835 aa13.75□□□□□ -0.21
CRAT-209ENST00000467343 FNDC1Q4ZHG4 1894 aaPredicted RBP13.74□□□□□ -0.21
CRAT-209ENST00000467343 A0A087WWV3 80 aa13.74□□□□□ -0.21
CRAT-209ENST00000467343 H3BQ06 376 aaPredicted RBP13.74□□□□□ -0.21
CRAT-209ENST00000467343 INO80B-WBP1J3KQ70 363 aa13.74□□□□□ -0.21
CRAT-209ENST00000467343 ASAP2O43150 1006 aa13.74□□□□□ -0.21
CRAT-209ENST00000467343 ITGB1P05556 798 aa13.74□□□□□ -0.21
CRAT-209ENST00000467343 RNASELQ05823 741 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms