RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 KAT2BQ92831 832 aa16.02■□□□□ 0.16
PRPF38B-204ENST00000467302 BORCS6Q96GS4 357 aa16.02■□□□□ 0.16
PRPF38B-204ENST00000467302 POLD4Q9HCU8 107 aa16.02■□□□□ 0.16
PRPF38B-204ENST00000467302 NOC2LQ9Y3T9 749 aaKnown RBP16.02■□□□□ 0.16
PRPF38B-204ENST00000467302 RBBP6Q7Z6E9 1792 aaKnown RBP16.02■□□□□ 0.16
PRPF38B-204ENST00000467302 ASTN2O75129 1339 aaPredicted RBP16.02■□□□□ 0.15
PRPF38B-204ENST00000467302 RSPH10B2B2RC85 870 aa16.02■□□□□ 0.15
PRPF38B-204ENST00000467302 CCDC188H7C350 402 aa16.02■□□□□ 0.15
PRPF38B-204ENST00000467302 RSPH10BP0C881 870 aa16.02■□□□□ 0.15
PRPF38B-204ENST00000467302 RPL13P26373 211 aaKnown RBP16.02■□□□□ 0.15
PRPF38B-204ENST00000467302 CASP4P49662 377 aa16.02■□□□□ 0.15
PRPF38B-204ENST00000467302 HLTFQ14527 1009 aaKnown RBP eCLIP16.02■□□□□ 0.15
PRPF38B-204ENST00000467302 DCAF17Q5H9S7 520 aaPredicted RBP16.02■□□□□ 0.15
PRPF38B-204ENST00000467302 NAA35Q5VZE5 725 aa16.02■□□□□ 0.15
PRPF38B-204ENST00000467302 AP1M1Q9BXS5 423 aa16.02■□□□□ 0.15
PRPF38B-204ENST00000467302 IGLV3-22A0A075B6J6 115 aa16.01■□□□□ 0.15
PRPF38B-204ENST00000467302 ICAM1P05362 532 aa16.01■□□□□ 0.15
PRPF38B-204ENST00000467302 H2AFZP0C0S5 128 aa16.01■□□□□ 0.15
PRPF38B-204ENST00000467302 ICE2Q659A1 982 aa16.01■□□□□ 0.15
PRPF38B-204ENST00000467302 H2AFVQ71UI9 128 aa16.01■□□□□ 0.15
PRPF38B-204ENST00000467302 MAATS1Q7Z4T9 603 aa16.01■□□□□ 0.15
PRPF38B-204ENST00000467302 NT5DC3Q86UY8 548 aa16.01■□□□□ 0.15
PRPF38B-204ENST00000467302 PRPF38AQ8NAV1 312 aaKnown RBP16.01■□□□□ 0.15
PRPF38B-204ENST00000467302 LMBR1Q8WVP7 490 aa16.01■□□□□ 0.15
PRPF38B-204ENST00000467302 SEC14L1Q92503 715 aa16.01■□□□□ 0.15
PRPF38B-204ENST00000467302 LRRC45Q96CN5 670 aa16.01■□□□□ 0.15
PRPF38B-204ENST00000467302 RUSC1Q9BVN2 902 aa16.01■□□□□ 0.15
PRPF38B-204ENST00000467302 NEUROG2Q9H2A3 272 aa16.01■□□□□ 0.15
PRPF38B-204ENST00000467302 BCAS3Q9H6U6 928 aa16.01■□□□□ 0.15
PRPF38B-204ENST00000467302 GCNT4Q9P109 453 aa16.01■□□□□ 0.15
PRPF38B-204ENST00000467302 VAV3Q9UKW4 847 aa16.01■□□□□ 0.15
PRPF38B-204ENST00000467302 KCNA1Q09470 495 aa16.01■□□□□ 0.15
PRPF38B-204ENST00000467302 GJB7Q6PEY0 223 aa16.01■□□□□ 0.15
PRPF38B-204ENST00000467302 PEX26Q7Z412 305 aa16.01■□□□□ 0.15
PRPF38B-204ENST00000467302 VPS36Q86VN1 386 aa16.01■□□□□ 0.15
PRPF38B-204ENST00000467302 DDX42Q86XP3 938 aaKnown RBP eCLIP16.01■□□□□ 0.15
PRPF38B-204ENST00000467302 SLC30A5Q8TAD4 765 aa16.01■□□□□ 0.15
PRPF38B-204ENST00000467302 HES6Q96HZ4 224 aa16.01■□□□□ 0.15
PRPF38B-204ENST00000467302 OLFML3Q9NRN5 406 aa16.01■□□□□ 0.15
PRPF38B-204ENST00000467302 CCPG1Q9ULG6 757 aa16.01■□□□□ 0.15
PRPF38B-204ENST00000467302 KRIT1O00522 736 aa16■□□□□ 0.15
PRPF38B-204ENST00000467302 TGFB1I1O43294 461 aa16■□□□□ 0.15
PRPF38B-204ENST00000467302 GFPT2O94808 682 aa16■□□□□ 0.15
PRPF38B-204ENST00000467302 ITGA4P13612 1032 aa16■□□□□ 0.15
PRPF38B-204ENST00000467302 ZNF844Q08AG5 666 aa16■□□□□ 0.15
PRPF38B-204ENST00000467302 PTPROQ16827 1216 aa16■□□□□ 0.15
PRPF38B-204ENST00000467302 TCERG1LQ5VWI1 586 aa16■□□□□ 0.15
PRPF38B-204ENST00000467302 YTHDF3Q7Z739 585 aaKnown RBP16■□□□□ 0.15
PRPF38B-204ENST00000467302 SUGP1Q8IWZ8 645 aaKnown RBP16■□□□□ 0.15
PRPF38B-204ENST00000467302 SYCE1Q8N0S2 351 aa16■□□□□ 0.15
PRPF38B-204ENST00000467302 ZNF473Q8WTR7 871 aaKnown RBP16■□□□□ 0.15
PRPF38B-204ENST00000467302 AGBL1Q96MI9 1066 aa16■□□□□ 0.15
PRPF38B-204ENST00000467302 POLR3CQ9BUI4 534 aaPredicted RBP16■□□□□ 0.15
PRPF38B-204ENST00000467302 DDX47Q9H0S4 455 aaKnown RBP16■□□□□ 0.15
PRPF38B-204ENST00000467302 BHMT2Q9H2M3 363 aa16■□□□□ 0.15
PRPF38B-204ENST00000467302 SLITRK6Q9H5Y7 841 aa16■□□□□ 0.15
PRPF38B-204ENST00000467302 GOLGA6L10A6NI86 522 aa15.99■□□□□ 0.15
PRPF38B-204ENST00000467302 MEFVO15553 781 aaPredicted RBP15.99■□□□□ 0.15
PRPF38B-204ENST00000467302 EYA4O95677 639 aa15.99■□□□□ 0.15
PRPF38B-204ENST00000467302 MYZAPP0CAP1 466 aa15.99■□□□□ 0.15
PRPF38B-204ENST00000467302 FERP16591 822 aa15.99■□□□□ 0.15
PRPF38B-204ENST00000467302 NBPF12Q5TAG4 269 aaPredicted RBP15.99■□□□□ 0.15
PRPF38B-204ENST00000467302 MMS22LQ6ZRQ5 1243 aa15.99■□□□□ 0.15
PRPF38B-204ENST00000467302 MYCBPAPQ8TBZ2 947 aa15.99■□□□□ 0.15
PRPF38B-204ENST00000467302 CCT8L2Q96SF2 557 aa15.99■□□□□ 0.15
PRPF38B-204ENST00000467302 WDR18Q9BV38 432 aa15.99■□□□□ 0.15
PRPF38B-204ENST00000467302 TTC7AQ9ULT0 858 aaPredicted RBP15.99■□□□□ 0.15
PRPF38B-204ENST00000467302 RABGAP1Q9Y3P9 1069 aa15.99■□□□□ 0.15
PRPF38B-204ENST00000467302 TMCO5BA8MYB1 307 aa15.99■□□□□ 0.15
PRPF38B-204ENST00000467302 CLIC2O15247 247 aa15.99■□□□□ 0.15
PRPF38B-204ENST00000467302 GCNT3O95395 438 aa15.99■□□□□ 0.15
PRPF38B-204ENST00000467302 FLT3P36888 993 aa15.99■□□□□ 0.15
PRPF38B-204ENST00000467302 UBXN2AP68543 259 aa15.99■□□□□ 0.15
PRPF38B-204ENST00000467302 POU5F1Q01860 360 aaKnown RBP15.99■□□□□ 0.15
PRPF38B-204ENST00000467302 NFIL3Q16649 462 aa15.99■□□□□ 0.15
PRPF38B-204ENST00000467302 DAAM2Q86T65 1068 aa15.99■□□□□ 0.15
PRPF38B-204ENST00000467302 NLRP14Q86W24 1093 aa15.99■□□□□ 0.15
PRPF38B-204ENST00000467302 SCYL3Q8IZE3 742 aa15.99■□□□□ 0.15
PRPF38B-204ENST00000467302 KCTD17Q8N5Z5 321 aa15.99■□□□□ 0.15
PRPF38B-204ENST00000467302 LNX1Q8TBB1 728 aaPredicted RBP15.99■□□□□ 0.15
PRPF38B-204ENST00000467302 UPF1Q92900 1129 aaKnown RBP eCLIP15.99■□□□□ 0.15
PRPF38B-204ENST00000467302 EIF2AK1Q9BQI3 630 aaKnown RBP15.99■□□□□ 0.15
PRPF38B-204ENST00000467302 GPRC5DQ9NZD1 345 aa15.99■□□□□ 0.15
PRPF38B-204ENST00000467302 AMACRQ9UHK6 382 aa15.99■□□□□ 0.15
PRPF38B-204ENST00000467302 SLC12A6Q9UHW9 1150 aa15.99■□□□□ 0.15
PRPF38B-204ENST00000467302 ZNF112Q9UJU3 913 aa15.99■□□□□ 0.15
PRPF38B-204ENST00000467302 GGA2Q9UJY4 613 aa15.99■□□□□ 0.15
PRPF38B-204ENST00000467302 PNMA2Q9UL42 364 aa15.99■□□□□ 0.15
PRPF38B-204ENST00000467302 ZMYM2Q9UBW7 1377 aa15.99■□□□□ 0.15
PRPF38B-204ENST00000467302 ZNF536O15090 1300 aa15.98■□□□□ 0.15
PRPF38B-204ENST00000467302 PARP14Q460N5 1801 aa15.98■□□□□ 0.15
PRPF38B-204ENST00000467302 MYO1FO00160 1098 aa15.98■□□□□ 0.15
PRPF38B-204ENST00000467302 EML1O00423 815 aa15.98■□□□□ 0.15
PRPF38B-204ENST00000467302 EIF3DO15371 548 aaKnown RBP eCLIP15.98■□□□□ 0.15
PRPF38B-204ENST00000467302 TBCAO75347 108 aaKnown RBP15.98■□□□□ 0.15
PRPF38B-204ENST00000467302 FAM107AO95990 144 aa15.98■□□□□ 0.15
PRPF38B-204ENST00000467302 CTNNA1P35221 906 aaKnown RBP15.98■□□□□ 0.15
PRPF38B-204ENST00000467302 STAT1P42224 750 aa15.98■□□□□ 0.15
PRPF38B-204ENST00000467302 FNTAP49354 379 aa15.98■□□□□ 0.15
PRPF38B-204ENST00000467302 SEC24CP53992 1094 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms