RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 SKIDA1Q1XH10 827 aa5.25□□□□□ -1.57
VPS13A-209ENST00000467124 C3orf36Q3SXR2 165 aa5.25□□□□□ -1.57
VPS13A-209ENST00000467124 NBPF11Q86T75 865 aa5.25□□□□□ -1.57
VPS13A-209ENST00000467124 COL23A1Q86Y22 540 aaPredicted RBP5.25□□□□□ -1.57
VPS13A-209ENST00000467124 CALML6Q8TD86 181 aa5.25□□□□□ -1.57
VPS13A-209ENST00000467124 DIS3LQ8TF46 1054 aaKnown RBP5.25□□□□□ -1.57
VPS13A-209ENST00000467124 ZNF526Q8TF50 670 aaPredicted RBP5.25□□□□□ -1.57
VPS13A-209ENST00000467124 FAM168AQ92567 244 aa5.25□□□□□ -1.57
VPS13A-209ENST00000467124 SLC39A13Q96H72 371 aa5.25□□□□□ -1.57
VPS13A-209ENST00000467124 TMEM209Q96SK2 561 aa5.25□□□□□ -1.57
VPS13A-209ENST00000467124 MAP3K14Q99558 947 aa5.25□□□□□ -1.57
VPS13A-209ENST00000467124 NOL10Q9BSC4 688 aaKnown RBP5.25□□□□□ -1.57
VPS13A-209ENST00000467124 SARGQ9BW04 601 aa5.25□□□□□ -1.57
VPS13A-209ENST00000467124 EPB41L4BQ9H329 900 aa5.25□□□□□ -1.57
VPS13A-209ENST00000467124 EVLQ9UI08 416 aaPredicted RBP5.25□□□□□ -1.57
VPS13A-209ENST00000467124 PRSS50Q9UI38 385 aa5.25□□□□□ -1.57
VPS13A-209ENST00000467124 INTUQ9ULD6 942 aa5.25□□□□□ -1.57
VPS13A-209ENST00000467124 IRS2Q9Y4H2 1338 aa5.24□□□□□ -1.57
VPS13A-209ENST00000467124 ERC2O15083 957 aa5.24□□□□□ -1.57
VPS13A-209ENST00000467124 PMM2O15305 246 aa5.24□□□□□ -1.57
VPS13A-209ENST00000467124 ENO2P09104 434 aaPredicted RBP5.24□□□□□ -1.57
VPS13A-209ENST00000467124 MTHFD2P13995 350 aa5.24□□□□□ -1.57
VPS13A-209ENST00000467124 EDNRBP24530 442 aa5.24□□□□□ -1.57
VPS13A-209ENST00000467124 AKAP5P24588 427 aa5.24□□□□□ -1.57
VPS13A-209ENST00000467124 VIPR1P32241 457 aa5.24□□□□□ -1.57
VPS13A-209ENST00000467124 USP14P54578 494 aa5.24□□□□□ -1.57
VPS13A-209ENST00000467124 BCAR1P56945 870 aa5.24□□□□□ -1.57
VPS13A-209ENST00000467124 CACNB2Q08289 660 aaPredicted RBP5.24□□□□□ -1.57
VPS13A-209ENST00000467124 SPIDRQ14159 915 aa5.24□□□□□ -1.57
VPS13A-209ENST00000467124 C10orf62Q5T681 223 aaPredicted RBP5.24□□□□□ -1.57
VPS13A-209ENST00000467124 MPZL3Q6UWV2 235 aa5.24□□□□□ -1.57
VPS13A-209ENST00000467124 LMBR1LQ6UX01 489 aa5.24□□□□□ -1.57
VPS13A-209ENST00000467124 CCDC149Q6ZUS6 474 aa5.24□□□□□ -1.57
VPS13A-209ENST00000467124 OVCH2Q7RTZ1 564 aa5.24□□□□□ -1.57
VPS13A-209ENST00000467124 KANSL1Q7Z3B3 1105 aa5.24□□□□□ -1.57
VPS13A-209ENST00000467124 ZNF605Q86T29 641 aa5.24□□□□□ -1.57
VPS13A-209ENST00000467124 PJA1Q8NG27 643 aa5.24□□□□□ -1.57
VPS13A-209ENST00000467124 WDR48Q8TAF3 677 aa5.24□□□□□ -1.57
VPS13A-209ENST00000467124 GAB3Q8WWW8 586 aa5.24□□□□□ -1.57
VPS13A-209ENST00000467124 MVB12AQ96EY5 273 aa5.24□□□□□ -1.57
VPS13A-209ENST00000467124 ARPC5LQ9BPX5 153 aa5.24□□□□□ -1.57
VPS13A-209ENST00000467124 APOL5Q9BWW9 433 aa5.24□□□□□ -1.57
VPS13A-209ENST00000467124 C1orf112Q9NSG2 853 aa5.24□□□□□ -1.57
VPS13A-209ENST00000467124 GALNT8Q9NY28 637 aa5.24□□□□□ -1.57
VPS13A-209ENST00000467124 DAAM1Q9Y4D1 1078 aa5.24□□□□□ -1.57
VPS13A-209ENST00000467124 CDY2AQ9Y6F7 541 aa5.24□□□□□ -1.57
VPS13A-209ENST00000467124 NUMBLQ9Y6R0 609 aa5.24□□□□□ -1.57
VPS13A-209ENST00000467124 TEX51A0A1B0GUA7 166 aa5.23□□□□□ -1.57
VPS13A-209ENST00000467124 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.23□□□□□ -1.57
VPS13A-209ENST00000467124 HTRA2O43464 458 aaPredicted RBP5.23□□□□□ -1.57
VPS13A-209ENST00000467124 OPHN1O60890 802 aa5.23□□□□□ -1.57
VPS13A-209ENST00000467124 IL18BPO95998 194 aa5.23□□□□□ -1.57
VPS13A-209ENST00000467124 ALDH2P05091 517 aa5.23□□□□□ -1.57
VPS13A-209ENST00000467124 CYP2C8P10632 490 aa5.23□□□□□ -1.57
VPS13A-209ENST00000467124 GSPT1P15170 499 aaKnown RBP5.23□□□□□ -1.57
VPS13A-209ENST00000467124 PFKLP17858 780 aa5.23□□□□□ -1.57
VPS13A-209ENST00000467124 ANTXR2P58335 489 aa5.23□□□□□ -1.57
VPS13A-209ENST00000467124 IL13RA1P78552 427 aa5.23□□□□□ -1.57
VPS13A-209ENST00000467124 PURAQ00577 322 aaKnown RBP5.23□□□□□ -1.57
VPS13A-209ENST00000467124 CD83Q01151 205 aa5.23□□□□□ -1.57
VPS13A-209ENST00000467124 MGAT5Q09328 741 aa5.23□□□□□ -1.57
VPS13A-209ENST00000467124 PICALMQ13492 652 aa5.23□□□□□ -1.57
VPS13A-209ENST00000467124 HLTFQ14527 1009 aaKnown RBP eCLIP5.23□□□□□ -1.57
VPS13A-209ENST00000467124 ATAT1Q5SQI0 421 aa5.23□□□□□ -1.57
VPS13A-209ENST00000467124 USP45Q70EL2 814 aa5.23□□□□□ -1.57
VPS13A-209ENST00000467124 B3GNT8Q7Z7M8 397 aa5.23□□□□□ -1.57
VPS13A-209ENST00000467124 SLC41A1Q8IVJ1 513 aa5.23□□□□□ -1.57
VPS13A-209ENST00000467124 STPG3Q8N7X2 389 aa5.23□□□□□ -1.57
VPS13A-209ENST00000467124 FAM156AQ8NDB6 213 aa5.23□□□□□ -1.57
VPS13A-209ENST00000467124 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.23□□□□□ -1.57
VPS13A-209ENST00000467124 OR14C36Q8NHC7 312 aa5.23□□□□□ -1.57
VPS13A-209ENST00000467124 SVIPQ8NHG7 77 aa5.23□□□□□ -1.57
VPS13A-209ENST00000467124 IGDCC4Q8TDY8 1250 aa5.23□□□□□ -1.57
VPS13A-209ENST00000467124 RSAD2Q8WXG1 361 aa5.23□□□□□ -1.57
VPS13A-209ENST00000467124 RPGRQ92834 1020 aaKnown RBP5.23□□□□□ -1.57
VPS13A-209ENST00000467124 MAN1C1Q9NR34 630 aa5.23□□□□□ -1.57
VPS13A-209ENST00000467124 DLL4Q9NR61 685 aa5.23□□□□□ -1.57
VPS13A-209ENST00000467124 ARHGAP20Q9P2F6 1191 aa5.23□□□□□ -1.57
VPS13A-209ENST00000467124 FTSJ1Q9UET6 329 aa5.23□□□□□ -1.57
VPS13A-209ENST00000467124 DNAI1Q9UI46 699 aa5.23□□□□□ -1.57
VPS13A-209ENST00000467124 ZFP69BQ9UJL9 534 aa5.23□□□□□ -1.57
VPS13A-209ENST00000467124 CROTQ9UKG9 612 aa5.23□□□□□ -1.57
VPS13A-209ENST00000467124 PCDHB6Q9Y5E3 794 aa5.23□□□□□ -1.57
VPS13A-209ENST00000467124 PCDHA13Q9Y5I0 950 aa5.23□□□□□ -1.57
VPS13A-209ENST00000467124 COMMD10Q9Y6G5 202 aa5.23□□□□□ -1.57
VPS13A-209ENST00000467124 ZNF503-AS2A6NEH8 195 aa5.22□□□□□ -1.57
VPS13A-209ENST00000467124 LRRC14BA6NHZ5 514 aa5.22□□□□□ -1.57
VPS13A-209ENST00000467124 CYP7B1O75881 506 aa5.22□□□□□ -1.57
VPS13A-209ENST00000467124 CHGBP05060 677 aa5.22□□□□□ -1.57
VPS13A-209ENST00000467124 SERPINB3P29508 390 aa5.22□□□□□ -1.57
VPS13A-209ENST00000467124 IRAK1P51617 712 aa5.22□□□□□ -1.57
VPS13A-209ENST00000467124 SLC16A1P53985 500 aa5.22□□□□□ -1.57
VPS13A-209ENST00000467124 NOMO1Q15155 1222 aa5.22□□□□□ -1.57
VPS13A-209ENST00000467124 SAFBQ15424 915 aaKnown RBP eCLIP5.22□□□□□ -1.57
VPS13A-209ENST00000467124 ADRM1Q16186 407 aa5.22□□□□□ -1.57
VPS13A-209ENST00000467124 PGS1Q32NB8 556 aa5.22□□□□□ -1.57
VPS13A-209ENST00000467124 VPS37AQ8NEZ2 397 aa5.22□□□□□ -1.57
VPS13A-209ENST00000467124 OR2I1PQ8NGU4 316 aa5.22□□□□□ -1.57
VPS13A-209ENST00000467124 FDXACB1Q9BRP7 624 aaPredicted RBP5.22□□□□□ -1.57
VPS13A-209ENST00000467124 ADI1Q9BV57 179 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms