RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 A0A0A6YYJ9 748 aa4.56□□□□□ -1.68
GTF3C3-209ENST00000466862 GRXCR1A8MXD5 290 aa4.56□□□□□ -1.68
GTF3C3-209ENST00000466862 MTSS1O43312 755 aa4.56□□□□□ -1.68
GTF3C3-209ENST00000466862 TOX4O94842 621 aa4.56□□□□□ -1.68
GTF3C3-209ENST00000466862 PEX11BO96011 259 aa4.56□□□□□ -1.68
GTF3C3-209ENST00000466862 VSIG10L2P0DP72 767 aa4.56□□□□□ -1.68
GTF3C3-209ENST00000466862 KRT4P19013 534 aa4.56□□□□□ -1.68
GTF3C3-209ENST00000466862 DSG1Q02413 1049 aa4.56□□□□□ -1.68
GTF3C3-209ENST00000466862 HHEXQ03014 270 aa4.56□□□□□ -1.68
GTF3C3-209ENST00000466862 GAREM2Q75VX8 874 aa4.56□□□□□ -1.68
GTF3C3-209ENST00000466862 ZNF627Q7L945 461 aa4.56□□□□□ -1.68
GTF3C3-209ENST00000466862 ANKRD35Q8N283 1001 aa4.56□□□□□ -1.68
GTF3C3-209ENST00000466862 PPP1R14CQ8TAE6 165 aa4.56□□□□□ -1.68
GTF3C3-209ENST00000466862 GCDHQ92947 438 aaPredicted RBP4.56□□□□□ -1.68
GTF3C3-209ENST00000466862 MIEF2Q96C03 454 aa4.56□□□□□ -1.68
GTF3C3-209ENST00000466862 WDR92Q96MX6 357 aa4.56□□□□□ -1.68
GTF3C3-209ENST00000466862 IKZF4Q9H2S9 585 aa4.56□□□□□ -1.68
GTF3C3-209ENST00000466862 CABP5Q9NP86 173 aa4.56□□□□□ -1.68
GTF3C3-209ENST00000466862 INTS7Q9NVH2 962 aaKnown RBP4.56□□□□□ -1.68
GTF3C3-209ENST00000466862 GPRC5BQ9NZH0 403 aa4.56□□□□□ -1.68
GTF3C3-209ENST00000466862 H2AFY2Q9P0M6 372 aaPredicted RBP4.56□□□□□ -1.68
GTF3C3-209ENST00000466862 DNAI1Q9UI46 699 aa4.56□□□□□ -1.68
GTF3C3-209ENST00000466862 SPO11Q9Y5K1 396 aa4.56□□□□□ -1.68
GTF3C3-209ENST00000466862 WDR33Q9C0J8 1336 aaKnown RBP4.55□□□□□ -1.68
GTF3C3-209ENST00000466862 OPHN1O60890 802 aa4.55□□□□□ -1.68
GTF3C3-209ENST00000466862 JMJD7P0C870 316 aa4.55□□□□□ -1.68
GTF3C3-209ENST00000466862 HNRNPLP14866 589 aaKnown RBP eCLIP4.55□□□□□ -1.68
GTF3C3-209ENST00000466862 ATP2A2P16615 1042 aaKnown RBP4.55□□□□□ -1.68
GTF3C3-209ENST00000466862 SLC9A1P19634 815 aa4.55□□□□□ -1.68
GTF3C3-209ENST00000466862 POU3F2P20265 443 aaPredicted RBP4.55□□□□□ -1.68
GTF3C3-209ENST00000466862 BCAR1P56945 870 aa4.55□□□□□ -1.68
GTF3C3-209ENST00000466862 TGFB2P61812 414 aa4.55□□□□□ -1.68
GTF3C3-209ENST00000466862 KRTAP15-1Q3LI76 137 aa4.55□□□□□ -1.68
GTF3C3-209ENST00000466862 CDCA2Q69YH5 1023 aaPredicted RBP4.55□□□□□ -1.68
GTF3C3-209ENST00000466862 UNQ6494/PRO21346Q6UXR6 183 aa4.55□□□□□ -1.68
GTF3C3-209ENST00000466862 NME9Q86XW9 330 aa4.55□□□□□ -1.68
GTF3C3-209ENST00000466862 THEMISQ8N1K5 641 aaPredicted RBP4.55□□□□□ -1.68
GTF3C3-209ENST00000466862 PLA2G15Q8NCC3 412 aa4.55□□□□□ -1.68
GTF3C3-209ENST00000466862 RPL10LQ96L21 214 aaKnown RBP4.55□□□□□ -1.68
GTF3C3-209ENST00000466862 ENKD1Q9H0I2 346 aa4.55□□□□□ -1.68
GTF3C3-209ENST00000466862 MTG2Q9H4K7 406 aa4.55□□□□□ -1.68
GTF3C3-209ENST00000466862 OXSMQ9NWU1 459 aa4.55□□□□□ -1.68
GTF3C3-209ENST00000466862 UBE2QL1A1L167 161 aa4.54□□□□□ -1.68
GTF3C3-209ENST00000466862 ASMTLO95671 621 aa4.54□□□□□ -1.68
GTF3C3-209ENST00000466862 TGM1P22735 817 aa4.54□□□□□ -1.68
GTF3C3-209ENST00000466862 INHBCP55103 352 aa4.54□□□□□ -1.68
GTF3C3-209ENST00000466862 COL10A1Q03692 680 aa4.54□□□□□ -1.68
GTF3C3-209ENST00000466862 CRHR2Q13324 411 aa4.54□□□□□ -1.68
GTF3C3-209ENST00000466862 ZNF174Q15697 407 aa4.54□□□□□ -1.68
GTF3C3-209ENST00000466862 ELAVL1Q15717 326 aaKnown RBP4.54□□□□□ -1.68
GTF3C3-209ENST00000466862 ZBTB41Q5SVQ8 909 aa4.54□□□□□ -1.68
GTF3C3-209ENST00000466862 KIAA1841Q6NSI8 718 aa4.54□□□□□ -1.68
GTF3C3-209ENST00000466862 FAM111BQ6SJ93 734 aa4.54□□□□□ -1.68
GTF3C3-209ENST00000466862 RHOUQ7L0Q8 258 aa4.54□□□□□ -1.68
GTF3C3-209ENST00000466862 PHYKPLQ8IUZ5 450 aa4.54□□□□□ -1.68
GTF3C3-209ENST00000466862 C7orf31Q8N865 590 aa4.54□□□□□ -1.68
GTF3C3-209ENST00000466862 NEU4Q8WWR8 484 aaPredicted RBP4.54□□□□□ -1.68
GTF3C3-209ENST00000466862 TUBGCP5Q96RT8 1024 aa4.54□□□□□ -1.68
GTF3C3-209ENST00000466862 POFUT1Q9H488 388 aa4.54□□□□□ -1.68
GTF3C3-209ENST00000466862 PIF1Q9H611 641 aa4.54□□□□□ -1.68
GTF3C3-209ENST00000466862 C14orf93Q9H972 538 aaKnown RBP4.54□□□□□ -1.68
GTF3C3-209ENST00000466862 PARPBPQ9NWS1 579 aa4.54□□□□□ -1.68
GTF3C3-209ENST00000466862 MAGEC2Q9UBF1 373 aaPredicted RBP4.54□□□□□ -1.68
GTF3C3-209ENST00000466862 ELL2O00472 640 aaPredicted RBP4.53□□□□□ -1.68
GTF3C3-209ENST00000466862 TGM5O43548 720 aa4.53□□□□□ -1.68
GTF3C3-209ENST00000466862 PRPF6O94906 941 aaKnown RBP4.53□□□□□ -1.68
GTF3C3-209ENST00000466862 JUNP05412 331 aaKnown RBP4.53□□□□□ -1.68
GTF3C3-209ENST00000466862 ADH4P08319 380 aa4.53□□□□□ -1.68
GTF3C3-209ENST00000466862 MAKP20794 623 aa4.53□□□□□ -1.68
GTF3C3-209ENST00000466862 MAN2A2P49641 1150 aa4.53□□□□□ -1.68
GTF3C3-209ENST00000466862 ADCY2Q08462 1091 aa4.53□□□□□ -1.68
GTF3C3-209ENST00000466862 ADCY1Q08828 1119 aa4.53□□□□□ -1.68
GTF3C3-209ENST00000466862 FKBP15Q5T1M5 1219 aa4.53□□□□□ -1.68
GTF3C3-209ENST00000466862 NAIF1Q69YI7 327 aaPredicted RBP4.53□□□□□ -1.68
GTF3C3-209ENST00000466862 RTF1Q92541 710 aaKnown RBP4.53□□□□□ -1.68
GTF3C3-209ENST00000466862 RPGRQ92834 1020 aaKnown RBP4.53□□□□□ -1.68
GTF3C3-209ENST00000466862 CEP89Q96ST8 783 aa4.53□□□□□ -1.68
GTF3C3-209ENST00000466862 AGAP2Q99490 1192 aa4.53□□□□□ -1.68
GTF3C3-209ENST00000466862 TCF25Q9BQ70 676 aa4.53□□□□□ -1.68
GTF3C3-209ENST00000466862 MYL10Q9BUA6 226 aa4.53□□□□□ -1.68
GTF3C3-209ENST00000466862 OSBPL6Q9BZF3 934 aa4.53□□□□□ -1.68
GTF3C3-209ENST00000466862 SLC2A4RGQ9NR83 387 aa4.53□□□□□ -1.68
GTF3C3-209ENST00000466862 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.53□□□□□ -1.68
GTF3C3-209ENST00000466862 TRPS1Q9UHF7 1281 aa4.53□□□□□ -1.68
GTF3C3-209ENST00000466862 ZNF891A8MT65 544 aaPredicted RBP4.52□□□□□ -1.69
GTF3C3-209ENST00000466862 STC2O76061 302 aa4.52□□□□□ -1.69
GTF3C3-209ENST00000466862 SEC24DO94855 1032 aaPredicted RBP4.52□□□□□ -1.69
GTF3C3-209ENST00000466862 F2P00734 622 aa4.52□□□□□ -1.69
GTF3C3-209ENST00000466862 GAAP10253 952 aa4.52□□□□□ -1.69
GTF3C3-209ENST00000466862 KIR2DL3P43628 341 aa4.52□□□□□ -1.69
GTF3C3-209ENST00000466862 RANGAP1P46060 587 aaPredicted RBP4.52□□□□□ -1.69
GTF3C3-209ENST00000466862 INHBEP58166 350 aa4.52□□□□□ -1.69
GTF3C3-209ENST00000466862 SMAD3P84022 425 aaKnown RBP4.52□□□□□ -1.69
GTF3C3-209ENST00000466862 SPIDRQ14159 915 aa4.52□□□□□ -1.69
GTF3C3-209ENST00000466862 SMN1Q16637 294 aaKnown RBP4.52□□□□□ -1.69
GTF3C3-209ENST00000466862 TKFCQ3LXA3 575 aa4.52□□□□□ -1.69
GTF3C3-209ENST00000466862 KIF18BQ86Y91 864 aa4.52□□□□□ -1.69
GTF3C3-209ENST00000466862 SYNPOQ8N3V7 929 aa4.52□□□□□ -1.69
GTF3C3-209ENST00000466862 EFHBQ8N7U6 833 aa4.52□□□□□ -1.69
GTF3C3-209ENST00000466862 PIK3C3Q8NEB9 887 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms