RNA–Protein interactions for RNA: ENST00000466854.5

CCDC58-203, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 769 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-203ENST00000466854 SAE1Q9UBE0 346 aaPredicted RBP5.07□□□□□ -1.6
CCDC58-203ENST00000466854 DENND2AQ9ULE3 1009 aa5.07□□□□□ -1.6
CCDC58-203ENST00000466854 TLDC2A0PJX2 215 aa5.06□□□□□ -1.6
CCDC58-203ENST00000466854 PTPDC1A2A3K4 754 aa5.06□□□□□ -1.6
CCDC58-203ENST00000466854 CYP27B1O15528 508 aa5.06□□□□□ -1.6
CCDC58-203ENST00000466854 KPNA6O60684 536 aa5.06□□□□□ -1.6
CCDC58-203ENST00000466854 H2AFYO75367 372 aaKnown RBP5.06□□□□□ -1.6
CCDC58-203ENST00000466854 RFPL3O75679 317 aa5.06□□□□□ -1.6
CCDC58-203ENST00000466854 SCNN1GP51170 649 aa5.06□□□□□ -1.6
CCDC58-203ENST00000466854 SESN2P58004 480 aaPredicted RBP5.06□□□□□ -1.6
CCDC58-203ENST00000466854 SLC25A3Q00325 362 aa5.06□□□□□ -1.6
CCDC58-203ENST00000466854 PURAQ00577 322 aaKnown RBP5.06□□□□□ -1.6
CCDC58-203ENST00000466854 ROM1Q03395 351 aa5.06□□□□□ -1.6
CCDC58-203ENST00000466854 ARHGAP44Q17R89 818 aa5.06□□□□□ -1.6
CCDC58-203ENST00000466854 Q6ZPA2 131 aa5.06□□□□□ -1.6
CCDC58-203ENST00000466854 NIM1KQ8IY84 436 aa5.06□□□□□ -1.6
CCDC58-203ENST00000466854 THEMISQ8N1K5 641 aaPredicted RBP5.06□□□□□ -1.6
CCDC58-203ENST00000466854 CHST14Q8NCH0 376 aa5.06□□□□□ -1.6
CCDC58-203ENST00000466854 MAML3Q96JK9 1138 aa5.06□□□□□ -1.6
CCDC58-203ENST00000466854 RPL10LQ96L21 214 aaKnown RBP5.06□□□□□ -1.6
CCDC58-203ENST00000466854 HAPLN2Q9GZV7 340 aa5.06□□□□□ -1.6
CCDC58-203ENST00000466854 PCIF1Q9H4Z3 704 aa5.06□□□□□ -1.6
CCDC58-203ENST00000466854 IFT57Q9NWB7 429 aa5.06□□□□□ -1.6
CCDC58-203ENST00000466854 ZKSCAN5Q9Y2L8 839 aa5.06□□□□□ -1.6
CCDC58-203ENST00000466854 TMA7Q9Y2S6 64 aaKnown RBP5.06□□□□□ -1.6
CCDC58-203ENST00000466854 RBM8AQ9Y5S9 174 aaKnown RBP5.06□□□□□ -1.6
CCDC58-203ENST00000466854 TRAF5O00463 557 aa5.05□□□□□ -1.6
CCDC58-203ENST00000466854 ADH4P08319 380 aa5.05□□□□□ -1.6
CCDC58-203ENST00000466854 MAKP20794 623 aa5.05□□□□□ -1.6
CCDC58-203ENST00000466854 INHBCP55103 352 aa5.05□□□□□ -1.6
CCDC58-203ENST00000466854 INHBEP58166 350 aa5.05□□□□□ -1.6
CCDC58-203ENST00000466854 BPIFB4P59827 614 aa5.05□□□□□ -1.6
CCDC58-203ENST00000466854 CRHR2Q13324 411 aa5.05□□□□□ -1.6
CCDC58-203ENST00000466854 TCIRG1Q13488 830 aa5.05□□□□□ -1.6
CCDC58-203ENST00000466854 ZNF174Q15697 407 aa5.05□□□□□ -1.6
CCDC58-203ENST00000466854 SMN1Q16637 294 aaKnown RBP5.05□□□□□ -1.6
CCDC58-203ENST00000466854 DGKDQ16760 1214 aa5.05□□□□□ -1.6
CCDC58-203ENST00000466854 SLFN12LQ6IEE8 588 aa5.05□□□□□ -1.6
CCDC58-203ENST00000466854 GIMAP6Q6P9H5 292 aa5.05□□□□□ -1.6
CCDC58-203ENST00000466854 GAREM2Q75VX8 874 aa5.05□□□□□ -1.6
CCDC58-203ENST00000466854 LRRTM3Q86VH5 581 aa5.05□□□□□ -1.6
CCDC58-203ENST00000466854 ANKRD35Q8N283 1001 aa5.05□□□□□ -1.6
CCDC58-203ENST00000466854 ANKRD53Q8N9V6 530 aa5.05□□□□□ -1.6
CCDC58-203ENST00000466854 GCDHQ92947 438 aaPredicted RBP5.05□□□□□ -1.6
CCDC58-203ENST00000466854 NINJ1Q92982 152 aa5.05□□□□□ -1.6
CCDC58-203ENST00000466854 GFM2Q969S9 779 aaKnown RBP5.05□□□□□ -1.6
CCDC58-203ENST00000466854 CLIP3Q96DZ5 547 aa5.05□□□□□ -1.6
CCDC58-203ENST00000466854 C16orf92Q96LL3 132 aa5.05□□□□□ -1.6
CCDC58-203ENST00000466854 FEZ1Q99689 392 aa5.05□□□□□ -1.6
CCDC58-203ENST00000466854 SLKQ9H2G2 1235 aaPredicted RBP5.05□□□□□ -1.6
CCDC58-203ENST00000466854 SLC2A4RGQ9NR83 387 aa5.05□□□□□ -1.6
CCDC58-203ENST00000466854 PARPBPQ9NWS1 579 aa5.05□□□□□ -1.6
CCDC58-203ENST00000466854 A0A087X1B8 175 aa5.04□□□□□ -1.6
CCDC58-203ENST00000466854 UBA6A0AVT1 1052 aaPredicted RBP5.04□□□□□ -1.6
CCDC58-203ENST00000466854 H7C1D1 291 aa5.04□□□□□ -1.6
CCDC58-203ENST00000466854 KRT4P19013 534 aa5.04□□□□□ -1.6
CCDC58-203ENST00000466854 PTX3P26022 381 aaPredicted RBP5.04□□□□□ -1.6
CCDC58-203ENST00000466854 SART3Q15020 963 aaKnown RBP5.04□□□□□ -1.6
CCDC58-203ENST00000466854 KRTAP15-1Q3LI76 137 aa5.04□□□□□ -1.6
CCDC58-203ENST00000466854 TAF7LQ5H9L4 462 aa5.04□□□□□ -1.6
CCDC58-203ENST00000466854 CLEC14AQ86T13 490 aa5.04□□□□□ -1.6
CCDC58-203ENST00000466854 NXPE1Q8N323 547 aa5.04□□□□□ -1.6
CCDC58-203ENST00000466854 E2F7Q96AV8 911 aa5.04□□□□□ -1.6
CCDC58-203ENST00000466854 MIEF2Q96C03 454 aa5.04□□□□□ -1.6
CCDC58-203ENST00000466854 ACSS2Q9NR19 701 aa5.04□□□□□ -1.6
CCDC58-203ENST00000466854 INTS7Q9NVH2 962 aaKnown RBP5.04□□□□□ -1.6
CCDC58-203ENST00000466854 KCMF1Q9P0J7 381 aa5.04□□□□□ -1.6
CCDC58-203ENST00000466854 TBX22Q9Y458 520 aa5.04□□□□□ -1.6
CCDC58-203ENST00000466854 UBE2QL1A1L167 161 aa5.03□□□□□ -1.6
CCDC58-203ENST00000466854 GAS7O60861 476 aa5.03□□□□□ -1.6
CCDC58-203ENST00000466854 CLSTN1O94985 981 aa5.03□□□□□ -1.6
CCDC58-203ENST00000466854 TOB2Q14106 344 aaPredicted RBP5.03□□□□□ -1.6
CCDC58-203ENST00000466854 MYBPC3Q14896 1274 aa5.03□□□□□ -1.6
CCDC58-203ENST00000466854 GAGE13Q4V321 117 aa5.03□□□□□ -1.6
CCDC58-203ENST00000466854 DALRD3Q5D0E6 543 aaKnown RBP5.03□□□□□ -1.6
CCDC58-203ENST00000466854 TTC38Q5R3I4 469 aa5.03□□□□□ -1.6
CCDC58-203ENST00000466854 CREB3L3Q68CJ9 461 aa5.03□□□□□ -1.6
CCDC58-203ENST00000466854 FAM111BQ6SJ93 734 aa5.03□□□□□ -1.6
CCDC58-203ENST00000466854 KIAA1958Q8N8K9 716 aa5.03□□□□□ -1.6
CCDC58-203ENST00000466854 MFSD3Q96ES6 412 aa5.03□□□□□ -1.6
CCDC58-203ENST00000466854 AGAP2Q99490 1192 aa5.03□□□□□ -1.6
CCDC58-203ENST00000466854 IL23AQ9NPF7 189 aa5.03□□□□□ -1.6
CCDC58-203ENST00000466854 POLR3BQ9NW08 1133 aaPredicted RBP5.03□□□□□ -1.6
CCDC58-203ENST00000466854 GPRC5BQ9NZH0 403 aa5.03□□□□□ -1.6
CCDC58-203ENST00000466854 REXO2Q9Y3B8 237 aaKnown RBP5.03□□□□□ -1.6
CCDC58-203ENST00000466854 CBX4O00257 560 aa5.02□□□□□ -1.61
CCDC58-203ENST00000466854 TOX4O94842 621 aa5.02□□□□□ -1.61
CCDC58-203ENST00000466854 PEX11BO96011 259 aa5.02□□□□□ -1.61
CCDC58-203ENST00000466854 MYCLP1P12525 358 aaPredicted RBP5.02□□□□□ -1.61
CCDC58-203ENST00000466854 SLC9A1P19634 815 aa5.02□□□□□ -1.61
CCDC58-203ENST00000466854 RABGGTBP53611 331 aa5.02□□□□□ -1.61
CCDC58-203ENST00000466854 GYS2P54840 703 aa5.02□□□□□ -1.61
CCDC58-203ENST00000466854 PCBP1Q15365 356 aaKnown RBP eCLIP5.02□□□□□ -1.61
CCDC58-203ENST00000466854 ELAVL1Q15717 326 aaKnown RBP5.02□□□□□ -1.61
CCDC58-203ENST00000466854 PRAMEF9Q5VWM5 478 aa5.02□□□□□ -1.61
CCDC58-203ENST00000466854 C1QL3Q5VWW1 255 aa5.02□□□□□ -1.61
CCDC58-203ENST00000466854 SDE2Q6IQ49 451 aa5.02□□□□□ -1.61
CCDC58-203ENST00000466854 ESRP1Q6NXG1 681 aaKnown RBP5.02□□□□□ -1.61
CCDC58-203ENST00000466854 BMP8AQ7Z5Y6 402 aa5.02□□□□□ -1.61
CCDC58-203ENST00000466854 AHI1Q8N157 1196 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms