RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 PCDH8O95206 1070 aa5.54□□□□□ -1.52
VPS13D-203ENST00000466732 HNRNPLP14866 589 aaKnown RBP eCLIP5.54□□□□□ -1.521e-7■■■■□ 24
VPS13D-203ENST00000466732 SOX5P35711 763 aa5.54□□□□□ -1.52
VPS13D-203ENST00000466732 RPS19P39019 145 aaKnown RBP5.54□□□□□ -1.52
VPS13D-203ENST00000466732 ID4P47928 161 aa5.54□□□□□ -1.52
VPS13D-203ENST00000466732 ADCY7P51828 1080 aa5.54□□□□□ -1.52
VPS13D-203ENST00000466732 STRN3Q13033 797 aa5.54□□□□□ -1.52
VPS13D-203ENST00000466732 CDSNQ15517 529 aa5.54□□□□□ -1.52
VPS13D-203ENST00000466732 FRMD7Q6ZUT3 714 aa5.54□□□□□ -1.52
VPS13D-203ENST00000466732 CLEC14AQ86T13 490 aa5.54□□□□□ -1.52
VPS13D-203ENST00000466732 SHCBP1Q8NEM2 672 aa5.54□□□□□ -1.52
VPS13D-203ENST00000466732 CHAC2Q8WUX2 184 aa5.54□□□□□ -1.52
VPS13D-203ENST00000466732 RABGGTAQ92696 567 aa5.54□□□□□ -1.52
VPS13D-203ENST00000466732 GCDHQ92947 438 aaPredicted RBP5.54□□□□□ -1.52
VPS13D-203ENST00000466732 FERMT2Q96AC1 680 aa5.54□□□□□ -1.52
VPS13D-203ENST00000466732 SOX7Q9BT81 388 aa5.54□□□□□ -1.52
VPS13D-203ENST00000466732 SLC6A15Q9H2J7 730 aa5.54□□□□□ -1.52
VPS13D-203ENST00000466732 IFT22Q9H7X7 185 aa5.54□□□□□ -1.52
VPS13D-203ENST00000466732 AGO3Q9H9G7 860 aaKnown RBP5.54□□□□□ -1.52
VPS13D-203ENST00000466732 TSC22D4Q9Y3Q8 395 aa5.54□□□□□ -1.52
VPS13D-203ENST00000466732 RBM8AQ9Y5S9 174 aaKnown RBP5.54□□□□□ -1.52
VPS13D-203ENST00000466732 ST20-MTHFSA0A0A6YYL1 179 aa5.53□□□□□ -1.52
VPS13D-203ENST00000466732 C1QTNF3-AMACRE9PGA6 284 aa5.53□□□□□ -1.52
VPS13D-203ENST00000466732 ZEB2O60315 1214 aa5.53□□□□□ -1.52
VPS13D-203ENST00000466732 RAB11FIP3O75154 756 aa5.53□□□□□ -1.52
VPS13D-203ENST00000466732 PFKMP08237 780 aa5.53□□□□□ -1.52
VPS13D-203ENST00000466732 INSRRP14616 1297 aa5.53□□□□□ -1.52
VPS13D-203ENST00000466732 COMTP21964 271 aa5.53□□□□□ -1.52
VPS13D-203ENST00000466732 ADAM8P78325 824 aa5.53□□□□□ -1.52
VPS13D-203ENST00000466732 TCIRG1Q13488 830 aa5.53□□□□□ -1.52
VPS13D-203ENST00000466732 RIN1Q13671 783 aa5.53□□□□□ -1.52
VPS13D-203ENST00000466732 SAFB2Q14151 953 aaKnown RBP eCLIP5.53□□□□□ -1.52
VPS13D-203ENST00000466732 R3HDM1Q15032 1099 aaKnown RBP5.53□□□□□ -1.52
VPS13D-203ENST00000466732 HS1BP3Q53T59 392 aa5.53□□□□□ -1.52
VPS13D-203ENST00000466732 EGFLAMQ63HQ2 1017 aa5.53□□□□□ -1.52
VPS13D-203ENST00000466732 DBX2Q6ZNG2 339 aa5.53□□□□□ -1.52
VPS13D-203ENST00000466732 POLNQ7Z5Q5 900 aa5.53□□□□□ -1.52
VPS13D-203ENST00000466732 GGNQ86UU5 652 aa5.53□□□□□ -1.52
VPS13D-203ENST00000466732 CXorf67Q86X51 503 aaPredicted RBP5.53□□□□□ -1.52
VPS13D-203ENST00000466732 PALM2Q8IXS6 379 aa5.53□□□□□ -1.52
VPS13D-203ENST00000466732 PLA2G15Q8NCC3 412 aa5.53□□□□□ -1.52
VPS13D-203ENST00000466732 HIST1H2AHQ96KK5 128 aa5.53□□□□□ -1.52
VPS13D-203ENST00000466732 CDK5RAP1Q96SZ6 601 aaKnown RBP5.53□□□□□ -1.52
VPS13D-203ENST00000466732 TTC1Q99614 292 aa5.53□□□□□ -1.52
VPS13D-203ENST00000466732 HIST1H2AJQ99878 128 aa5.53□□□□□ -1.52
VPS13D-203ENST00000466732 NELFAQ9H3P2 528 aa5.53□□□□□ -1.52
VPS13D-203ENST00000466732 PRSS38A1L453 326 aa5.52□□□□□ -1.53
VPS13D-203ENST00000466732 MUSKO15146 869 aa5.52□□□□□ -1.53
VPS13D-203ENST00000466732 DAPK3O43293 454 aa5.52□□□□□ -1.53
VPS13D-203ENST00000466732 KDM1AO60341 852 aa5.52□□□□□ -1.53
VPS13D-203ENST00000466732 BPIFB4P59827 614 aa5.52□□□□□ -1.53
VPS13D-203ENST00000466732 FOXL1Q12952 345 aa5.52□□□□□ -1.53
VPS13D-203ENST00000466732 GRM7Q14831 915 aa5.52□□□□□ -1.53
VPS13D-203ENST00000466732 ZXDCQ2QGD7 858 aaPredicted RBP5.52□□□□□ -1.53
VPS13D-203ENST00000466732 LCE5AQ5TCM9 118 aa5.52□□□□□ -1.53
VPS13D-203ENST00000466732 Q6ZSN1 163 aa5.52□□□□□ -1.53
VPS13D-203ENST00000466732 RASSF3Q86WH2 238 aa5.52□□□□□ -1.53
VPS13D-203ENST00000466732 CDYL2Q8N8U2 506 aa5.52□□□□□ -1.53
VPS13D-203ENST00000466732 ANKRD53Q8N9V6 530 aa5.52□□□□□ -1.53
VPS13D-203ENST00000466732 BORCS6Q96GS4 357 aa5.52□□□□□ -1.53
VPS13D-203ENST00000466732 RPL10LQ96L21 214 aaKnown RBP5.52□□□□□ -1.53
VPS13D-203ENST00000466732 ANO3Q9BYT9 981 aa5.52□□□□□ -1.53
VPS13D-203ENST00000466732 OSBPL6Q9BZF3 934 aa5.52□□□□□ -1.53
VPS13D-203ENST00000466732 PLA2G3Q9NZ20 509 aa5.52□□□□□ -1.53
VPS13D-203ENST00000466732 USP18Q9UMW8 372 aa5.52□□□□□ -1.53
VPS13D-203ENST00000466732 APOBEC2Q9Y235 224 aaKnown RBP5.52□□□□□ -1.53
VPS13D-203ENST00000466732 MYRFQ9Y2G1 1151 aa5.52□□□□□ -1.53
VPS13D-203ENST00000466732 NOC2LQ9Y3T9 749 aaKnown RBP5.52□□□□□ -1.53
VPS13D-203ENST00000466732 PCDHB6Q9Y5E3 794 aa5.52□□□□□ -1.53
VPS13D-203ENST00000466732 PPP2R3BQ9Y5P8 575 aa5.52□□□□□ -1.53
VPS13D-203ENST00000466732 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.51□□□□□ -1.53
VPS13D-203ENST00000466732 ULK1O75385 1050 aa5.51□□□□□ -1.53
VPS13D-203ENST00000466732 FSBPO95073 299 aa5.51□□□□□ -1.53
VPS13D-203ENST00000466732 MSX2P35548 267 aaPredicted RBP5.51□□□□□ -1.53
VPS13D-203ENST00000466732 MANFP55145 182 aaKnown RBP5.51□□□□□ -1.53
VPS13D-203ENST00000466732 MAN2A1Q16706 1144 aa5.51□□□□□ -1.53
VPS13D-203ENST00000466732 KRT26Q7Z3Y9 468 aa5.51□□□□□ -1.53
VPS13D-203ENST00000466732 AFAP1L2Q8N4X5 818 aa5.51□□□□□ -1.53
VPS13D-203ENST00000466732 PPP1R14CQ8TAE6 165 aa5.51□□□□□ -1.53
VPS13D-203ENST00000466732 EDAQ92838 391 aa5.51□□□□□ -1.53
VPS13D-203ENST00000466732 TMEM176AQ96HP8 235 aa5.51□□□□□ -1.53
VPS13D-203ENST00000466732 ADOQ96SZ5 270 aa5.51□□□□□ -1.53
VPS13D-203ENST00000466732 GPHA2Q96T91 129 aa5.51□□□□□ -1.53
VPS13D-203ENST00000466732 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.51□□□□□ -1.53
VPS13D-203ENST00000466732 TMPRSS11EQ9UL52 423 aa5.51□□□□□ -1.53
VPS13D-203ENST00000466732 TESMINQ9Y4I5 508 aa5.51□□□□□ -1.53
VPS13D-203ENST00000466732 A0A1W2PRX2 142 aa5.5□□□□□ -1.53
VPS13D-203ENST00000466732 GOLGA8BA8MQT2 603 aa5.5□□□□□ -1.53
VPS13D-203ENST00000466732 TOX4O94842 621 aa5.5□□□□□ -1.53
VPS13D-203ENST00000466732 VIL1P09327 827 aaKnown RBP5.5□□□□□ -1.53
VPS13D-203ENST00000466732 CLEC2LP0C7M8 214 aa5.5□□□□□ -1.53
VPS13D-203ENST00000466732 VSIG10L2P0DP72 767 aa5.5□□□□□ -1.53
VPS13D-203ENST00000466732 ACO1P21399 889 aaKnown RBP5.5□□□□□ -1.53
VPS13D-203ENST00000466732 PUM1Q14671 1186 aaKnown RBP eCLIP5.5□□□□□ -1.53
VPS13D-203ENST00000466732 PRKD1Q15139 912 aaPredicted RBP5.5□□□□□ -1.53
VPS13D-203ENST00000466732 GAGE13Q4V321 117 aa5.5□□□□□ -1.53
VPS13D-203ENST00000466732 CT47A1Q5JQC4 288 aaPredicted RBP5.5□□□□□ -1.53
VPS13D-203ENST00000466732 MAMDC4Q6UXC1 1216 aa5.5□□□□□ -1.53
VPS13D-203ENST00000466732 HDGFL2Q7Z4V5 671 aaPredicted RBP5.5□□□□□ -1.53
VPS13D-203ENST00000466732 ADGRE4PQ86SQ3 457 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms