RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 MGEA5O60502 916 aa13.74□□□□□ -0.21
CHPF2-202ENST00000465601 UPP2O95045 317 aa13.74□□□□□ -0.21
CHPF2-202ENST00000465601 AMHP03971 560 aa13.74□□□□□ -0.21
CHPF2-202ENST00000465601 PLA2G4BP0C869 781 aa13.74□□□□□ -0.21
CHPF2-202ENST00000465601 PLCG1P19174 1290 aa13.74□□□□□ -0.21
CHPF2-202ENST00000465601 NCLP19338 710 aaKnown RBP13.74□□□□□ -0.21
CHPF2-202ENST00000465601 GLRA2P23416 452 aa13.74□□□□□ -0.21
CHPF2-202ENST00000465601 DDIT3P35638 169 aa13.74□□□□□ -0.21
CHPF2-202ENST00000465601 PBX2P40425 430 aa13.74□□□□□ -0.21
CHPF2-202ENST00000465601 NUCB2P80303 420 aa13.74□□□□□ -0.21
CHPF2-202ENST00000465601 DHX8Q14562 1220 aaKnown RBP13.74□□□□□ -0.21
CHPF2-202ENST00000465601 MXD4Q14582 209 aaPredicted RBP13.74□□□□□ -0.21
CHPF2-202ENST00000465601 RINT1Q6NUQ1 792 aa13.74□□□□□ -0.21
CHPF2-202ENST00000465601 HERC6Q8IVU3 1022 aa13.74□□□□□ -0.21
CHPF2-202ENST00000465601 KCTD17Q8N5Z5 321 aa13.74□□□□□ -0.21
CHPF2-202ENST00000465601 SYT2Q8N9I0 419 aaPredicted RBP13.74□□□□□ -0.21
CHPF2-202ENST00000465601 LRRC15Q8TF66 581 aa13.74□□□□□ -0.21
CHPF2-202ENST00000465601 LINC01599Q8WXQ3 324 aa13.74□□□□□ -0.21
CHPF2-202ENST00000465601 RUSC1Q9BVN2 902 aa13.74□□□□□ -0.21
CHPF2-202ENST00000465601 FTHL17Q9BXU8 183 aa13.74□□□□□ -0.21
CHPF2-202ENST00000465601 PBX4Q9BYU1 374 aa13.74□□□□□ -0.21
CHPF2-202ENST00000465601 PANK2Q9BZ23 570 aa13.74□□□□□ -0.21
CHPF2-202ENST00000465601 RCOR1Q9UKL0 485 aa13.74□□□□□ -0.21
CHPF2-202ENST00000465601 CHD9Q3L8U1 2897 aa13.73□□□□□ -0.21
CHPF2-202ENST00000465601 CUTAO60888 179 aa13.73□□□□□ -0.21
CHPF2-202ENST00000465601 MYOGP15173 224 aa13.73□□□□□ -0.21
CHPF2-202ENST00000465601 IBSPP21815 317 aaPredicted RBP13.73□□□□□ -0.21
CHPF2-202ENST00000465601 SLC12A3P55017 1021 aa13.73□□□□□ -0.21
CHPF2-202ENST00000465601 CAPSQ13938 189 aa13.73□□□□□ -0.21
CHPF2-202ENST00000465601 C1orf186Q6ZWK4 172 aa13.73□□□□□ -0.21
CHPF2-202ENST00000465601 SRGAP1Q7Z6B7 1085 aa13.73□□□□□ -0.21
CHPF2-202ENST00000465601 KCNG4Q8TDN1 519 aa13.73□□□□□ -0.21
CHPF2-202ENST00000465601 BSNDQ8WZ55 320 aa13.73□□□□□ -0.21
CHPF2-202ENST00000465601 ADAM2Q99965 735 aa13.73□□□□□ -0.21
CHPF2-202ENST00000465601 ZBED2Q9BTP6 218 aa13.73□□□□□ -0.21
CHPF2-202ENST00000465601 INO80BQ9C086 356 aaPredicted RBP13.73□□□□□ -0.21
CHPF2-202ENST00000465601 MINDY3Q9H8M7 445 aa13.73□□□□□ -0.21
CHPF2-202ENST00000465601 BLOC1S4Q9NUP1 217 aa13.73□□□□□ -0.21
CHPF2-202ENST00000465601 CCDC39Q9UFE4 941 aa13.73□□□□□ -0.21
CHPF2-202ENST00000465601 MSRAQ9UJ68 235 aa13.73□□□□□ -0.21
CHPF2-202ENST00000465601 PCDHA7Q9UN72 937 aa13.73□□□□□ -0.21
CHPF2-202ENST00000465601 ATP6V1DQ9Y5K8 247 aa13.73□□□□□ -0.21
CHPF2-202ENST00000465601 DENND3A2RUS2 1198 aa13.72□□□□□ -0.21
CHPF2-202ENST00000465601 HIP1RO75146 1068 aa13.72□□□□□ -0.21
CHPF2-202ENST00000465601 DNAJB2P25686 324 aa13.72□□□□□ -0.21
CHPF2-202ENST00000465601 TXLNAP40222 546 aa13.72□□□□□ -0.21
CHPF2-202ENST00000465601 PHKA2P46019 1235 aa13.72□□□□□ -0.21
CHPF2-202ENST00000465601 ME1P48163 572 aa13.72□□□□□ -0.21
CHPF2-202ENST00000465601 PTENP60484 403 aa13.72□□□□□ -0.21
CHPF2-202ENST00000465601 KRT85P78386 507 aa13.72□□□□□ -0.21
CHPF2-202ENST00000465601 RAD51AP2Q09MP3 1159 aa13.72□□□□□ -0.21
CHPF2-202ENST00000465601 TFDP1Q14186 410 aa13.72□□□□□ -0.21
CHPF2-202ENST00000465601 MCM6Q14566 821 aa13.72□□□□□ -0.21
CHPF2-202ENST00000465601 DSC3Q14574 896 aa13.72□□□□□ -0.21
CHPF2-202ENST00000465601 AXDND1Q5T1B0 1012 aaPredicted RBP13.72□□□□□ -0.21
CHPF2-202ENST00000465601 RRAGBQ5VZM2 374 aa13.72□□□□□ -0.21
CHPF2-202ENST00000465601 CATSPER4Q7RTX7 472 aa13.72□□□□□ -0.21
CHPF2-202ENST00000465601 RAD54LQ92698 747 aa13.72□□□□□ -0.21
CHPF2-202ENST00000465601 TOP1MTQ969P6 601 aa13.72□□□□□ -0.21
CHPF2-202ENST00000465601 TSPYL2Q9H2G4 693 aaPredicted RBP13.72□□□□□ -0.21
CHPF2-202ENST00000465601 YBX2Q9Y2T7 364 aaKnown RBP13.72□□□□□ -0.21
CHPF2-202ENST00000465601 PCDHA11Q9Y5I1 949 aa13.72□□□□□ -0.21
CHPF2-202ENST00000465601 A0A087X0B3 334 aa13.71□□□□□ -0.21
CHPF2-202ENST00000465601 NPHP3-ACAD11A0A0J9YXS1 232 aa13.71□□□□□ -0.21
CHPF2-202ENST00000465601 LRRIQ4A6NIV6 560 aa13.71□□□□□ -0.21
CHPF2-202ENST00000465601 INO80B-WBP1J3KQ70 363 aa13.71□□□□□ -0.21
CHPF2-202ENST00000465601 TLL1O43897 1013 aa13.71□□□□□ -0.21
CHPF2-202ENST00000465601 GJB5O95377 273 aa13.71□□□□□ -0.21
CHPF2-202ENST00000465601 ZSCAN20P17040 1043 aaPredicted RBP13.71□□□□□ -0.21
CHPF2-202ENST00000465601 SFPQP23246 707 aaKnown RBP eCLIP13.71□□□□□ -0.21
CHPF2-202ENST00000465601 POU5F1BQ06416 359 aa13.71□□□□□ -0.21
CHPF2-202ENST00000465601 RAB30Q15771 203 aa13.71□□□□□ -0.21
CHPF2-202ENST00000465601 ARSHQ5FYA8 562 aa13.71□□□□□ -0.21
CHPF2-202ENST00000465601 SHC4Q6S5L8 630 aa13.71□□□□□ -0.21
CHPF2-202ENST00000465601 DAW1Q8N136 415 aa13.71□□□□□ -0.21
CHPF2-202ENST00000465601 PDILTQ8N807 584 aa13.71□□□□□ -0.21
CHPF2-202ENST00000465601 LEO1Q8WVC0 666 aaPredicted RBP13.71□□□□□ -0.21
CHPF2-202ENST00000465601 KIFAP3Q92845 792 aa13.71□□□□□ -0.21
CHPF2-202ENST00000465601 TIFAQ96CG3 184 aa13.71□□□□□ -0.21
CHPF2-202ENST00000465601 SPATA32Q96LK8 384 aa13.71□□□□□ -0.21
CHPF2-202ENST00000465601 NKX2-4Q9H2Z4 354 aa13.71□□□□□ -0.21
CHPF2-202ENST00000465601 RGS18Q9NS28 235 aa13.71□□□□□ -0.21
CHPF2-202ENST00000465601 CHD7Q9P2D1 2997 aa13.71□□□□□ -0.22
CHPF2-202ENST00000465601 MYO7AQ13402 2215 aa13.7□□□□□ -0.22
CHPF2-202ENST00000465601 SFI1A8K8P3 1242 aa13.7□□□□□ -0.22
CHPF2-202ENST00000465601 GUCY2CP25092 1073 aa13.7□□□□□ -0.22
CHPF2-202ENST00000465601 CACNB1Q02641 598 aaPredicted RBP13.7□□□□□ -0.22
CHPF2-202ENST00000465601 MAPK7Q13164 816 aa13.7□□□□□ -0.22
CHPF2-202ENST00000465601 NAALADL2Q58DX5 795 aa13.7□□□□□ -0.22
CHPF2-202ENST00000465601 CCDC73Q6ZRK6 1079 aa13.7□□□□□ -0.22
CHPF2-202ENST00000465601 GPBP1Q86WP2 473 aa13.7□□□□□ -0.22
CHPF2-202ENST00000465601 IFNLR1Q8IU57 520 aaPredicted RBP13.7□□□□□ -0.22
CHPF2-202ENST00000465601 LARP4BQ92615 738 aaKnown RBP13.7□□□□□ -0.22
CHPF2-202ENST00000465601 IFT74Q96LB3 600 aa13.7□□□□□ -0.22
CHPF2-202ENST00000465601 RAD9AQ99638 391 aa13.7□□□□□ -0.22
CHPF2-202ENST00000465601 PIN4Q9Y237 131 aaKnown RBP13.7□□□□□ -0.22
CHPF2-202ENST00000465601 LCHNA4D1U4 455 aa13.69□□□□□ -0.22
CHPF2-202ENST00000465601 CCDC169A6NNP5 214 aa13.69□□□□□ -0.22
CHPF2-202ENST00000465601 C9IYK1 514 aa13.69□□□□□ -0.22
CHPF2-202ENST00000465601 STAT6P42226 847 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms