RNA–Protein interactions for RNA: ENST00000465529.1

TOM1-213, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-213ENST00000465529 LINC01565O15544 149 aa19.19■□□□□ 0.66
TOM1-213ENST00000465529 PBX3P40426 434 aa19.19■□□□□ 0.66
TOM1-213ENST00000465529 RBM25P49756 843 aaKnown RBP19.19■□□□□ 0.66
TOM1-213ENST00000465529 LEXMQ3ZCV2 418 aa19.19■□□□□ 0.66
TOM1-213ENST00000465529 LONRF3Q496Y0 759 aa19.19■□□□□ 0.66
TOM1-213ENST00000465529 XKR9Q5GH70 373 aa19.19■□□□□ 0.66
TOM1-213ENST00000465529 CLLU1OSQ5K130 101 aa19.19■□□□□ 0.66
TOM1-213ENST00000465529 COLGALT1Q8NBJ5 622 aa19.19■□□□□ 0.66
TOM1-213ENST00000465529 LLPHQ9BRT6 129 aaKnown RBP19.19■□□□□ 0.66
TOM1-213ENST00000465529 IGFLR1Q9H665 355 aa19.19■□□□□ 0.66
TOM1-213ENST00000465529 ZSWIM4Q9H7M6 989 aa19.19■□□□□ 0.66
TOM1-213ENST00000465529 IFT122Q9HBG6 1241 aa19.19■□□□□ 0.66
TOM1-213ENST00000465529 PCDHA12Q9UN75 941 aa19.19■□□□□ 0.66
TOM1-213ENST00000465529 COL4A3BPQ9Y5P4 624 aa19.19■□□□□ 0.66
TOM1-213ENST00000465529 DKC1O60832 514 aaKnown RBP eCLIP19.18■□□□□ 0.66
TOM1-213ENST00000465529 LTBRP36941 435 aa19.18■□□□□ 0.66
TOM1-213ENST00000465529 DLX2Q07687 328 aaPredicted RBP19.18■□□□□ 0.66
TOM1-213ENST00000465529 NBR1Q14596 966 aa19.18■□□□□ 0.66
TOM1-213ENST00000465529 EMC2Q15006 297 aa19.18■□□□□ 0.66
TOM1-213ENST00000465529 ZNF174Q15697 407 aa19.18■□□□□ 0.66
TOM1-213ENST00000465529 ZNF598Q86UK7 904 aaKnown RBP19.18■□□□□ 0.66
TOM1-213ENST00000465529 ZNF410Q86VK4 478 aa19.18■□□□□ 0.66
TOM1-213ENST00000465529 ZNF710Q8N1W2 664 aa19.18■□□□□ 0.66
TOM1-213ENST00000465529 NEK9Q8TD19 979 aa19.18■□□□□ 0.66
TOM1-213ENST00000465529 HELQQ8TDG4 1101 aa19.18■□□□□ 0.66
TOM1-213ENST00000465529 PRPF31Q8WWY3 499 aaKnown RBP19.18■□□□□ 0.66
TOM1-213ENST00000465529 SLC7A3Q8WY07 619 aa19.18■□□□□ 0.66
TOM1-213ENST00000465529 LPPQ93052 612 aa19.18■□□□□ 0.66
TOM1-213ENST00000465529 PABPC5Q96DU9 382 aaKnown RBP19.18■□□□□ 0.66
TOM1-213ENST00000465529 ZSCAN31Q96LW9 406 aaPredicted RBP19.18■□□□□ 0.66
TOM1-213ENST00000465529 TMEM117Q9H0C3 514 aa19.18■□□□□ 0.66
TOM1-213ENST00000465529 MINDY3Q9H8M7 445 aa19.18■□□□□ 0.66
TOM1-213ENST00000465529 XPNPEP1Q9NQW7 623 aa19.18■□□□□ 0.66
TOM1-213ENST00000465529 PIN4Q9Y237 131 aaKnown RBP19.18■□□□□ 0.66
TOM1-213ENST00000465529 MEIS3P2A8K0S8 358 aa19.17■□□□□ 0.66
TOM1-213ENST00000465529 CD2BP2O95400 341 aaKnown RBP19.17■□□□□ 0.66
TOM1-213ENST00000465529 SRGAP2CP0DJJ0 459 aa19.17■□□□□ 0.66
TOM1-213ENST00000465529 SFPQP23246 707 aaKnown RBP eCLIP19.17■□□□□ 0.66
TOM1-213ENST00000465529 COL19A1Q14993 1142 aa19.17■□□□□ 0.66
TOM1-213ENST00000465529 SAFBQ15424 915 aaKnown RBP eCLIP19.17■□□□□ 0.66
TOM1-213ENST00000465529 CLUL1Q15846 466 aa19.17■□□□□ 0.66
TOM1-213ENST00000465529 HSD17B14Q9BPX1 270 aa19.17■□□□□ 0.66
TOM1-213ENST00000465529 JPH2Q9BR39 696 aaPredicted RBP19.17■□□□□ 0.66
TOM1-213ENST00000465529 CD320Q9NPF0 282 aa19.17■□□□□ 0.66
TOM1-213ENST00000465529 SH2B1Q9NRF2 756 aaPredicted RBP19.17■□□□□ 0.66
TOM1-213ENST00000465529 A0A0U1RQF3 1178 aa19.16■□□□□ 0.66
TOM1-213ENST00000465529 FGF18O76093 207 aa19.16■□□□□ 0.66
TOM1-213ENST00000465529 RFC5P40937 340 aa19.16■□□□□ 0.66
TOM1-213ENST00000465529 LAMTOR4Q0VGL1 99 aa19.16■□□□□ 0.66
TOM1-213ENST00000465529 NAALADL2Q58DX5 795 aa19.16■□□□□ 0.66
TOM1-213ENST00000465529 TWF2Q6IBS0 349 aaKnown RBP19.16■□□□□ 0.66
TOM1-213ENST00000465529 PTCRAQ6ISU1 281 aaPredicted RBP19.16■□□□□ 0.66
TOM1-213ENST00000465529 FAM43BQ6ZT52 329 aaPredicted RBP19.16■□□□□ 0.66
TOM1-213ENST00000465529 CATSPER4Q7RTX7 472 aa19.16■□□□□ 0.66
TOM1-213ENST00000465529 THNSL1Q8IYQ7 743 aa19.16■□□□□ 0.66
TOM1-213ENST00000465529 FAM184AQ8NB25 1140 aa19.16■□□□□ 0.66
TOM1-213ENST00000465529 FBXO18Q8NFZ0 1043 aa19.16■□□□□ 0.66
TOM1-213ENST00000465529 PIGOQ8TEQ8 1089 aa19.16■□□□□ 0.66
TOM1-213ENST00000465529 PSPC1Q8WXF1 523 aaKnown RBP19.16■□□□□ 0.66
TOM1-213ENST00000465529 KHSRPQ92945 711 aaKnown RBP eCLIP19.16■□□□□ 0.66
TOM1-213ENST00000465529 MTRQ99707 1265 aa19.16■□□□□ 0.66
TOM1-213ENST00000465529 PCDHB12Q9Y5F1 795 aa19.16■□□□□ 0.66
TOM1-213ENST00000465529 TBX10O75333 385 aa19.15■□□□□ 0.66
TOM1-213ENST00000465529 PHKA2P46019 1235 aa19.15■□□□□ 0.66
TOM1-213ENST00000465529 ERVFC1P60507 584 aa19.15■□□□□ 0.66
TOM1-213ENST00000465529 HMGN5P82970 282 aaKnown RBP19.15■□□□□ 0.66
TOM1-213ENST00000465529 CTC1Q2NKJ3 1217 aa19.15■□□□□ 0.66
TOM1-213ENST00000465529 OTUD6AQ7L8S5 288 aa19.15■□□□□ 0.66
TOM1-213ENST00000465529 RBM23Q86U06 439 aaKnown RBP19.15■□□□□ 0.66
TOM1-213ENST00000465529 ABI1Q8IZP0 508 aa19.15■□□□□ 0.66
TOM1-213ENST00000465529 FOXP1Q9H334 677 aaPredicted RBP19.15■□□□□ 0.66
TOM1-213ENST00000465529 RNF216Q9NWF9 866 aaPredicted RBP19.15■□□□□ 0.66
TOM1-213ENST00000465529 DACT1Q9NYF0 836 aa19.15■□□□□ 0.66
TOM1-213ENST00000465529 BDP1A6H8Y1 2624 aa19.14■□□□□ 0.65
TOM1-213ENST00000465529 MED24O75448 989 aa19.14■□□□□ 0.65
TOM1-213ENST00000465529 LYPLA2O95372 231 aa19.14■□□□□ 0.65
TOM1-213ENST00000465529 SPATA31C1P0DKV0 1188 aa19.14■□□□□ 0.65
TOM1-213ENST00000465529 LAG3P18627 525 aa19.14■□□□□ 0.65
TOM1-213ENST00000465529 TECP42680 631 aa19.14■□□□□ 0.65
TOM1-213ENST00000465529 RBM10P98175 930 aaKnown RBP19.14■□□□□ 0.65
TOM1-213ENST00000465529 CDC42EP1Q00587 391 aa19.14■□□□□ 0.65
TOM1-213ENST00000465529 RABEP1Q15276 862 aa19.14■□□□□ 0.65
TOM1-213ENST00000465529 FERMT3Q86UX7 667 aa19.14■□□□□ 0.65
TOM1-213ENST00000465529 LRRC43Q8N309 656 aa19.14■□□□□ 0.65
TOM1-213ENST00000465529 RNF149Q8NC42 400 aa19.14■□□□□ 0.65
TOM1-213ENST00000465529 ASAP3Q8TDY4 903 aa19.14■□□□□ 0.65
TOM1-213ENST00000465529 INO80BQ9C086 356 aaPredicted RBP19.14■□□□□ 0.65
TOM1-213ENST00000465529 CHST12Q9NRB3 414 aa19.14■□□□□ 0.65
TOM1-213ENST00000465529 AAASQ9NRG9 546 aa19.14■□□□□ 0.65
TOM1-213ENST00000465529 AGPAT5Q9NUQ2 364 aa19.14■□□□□ 0.65
TOM1-213ENST00000465529 PPME1Q9Y570 386 aa19.14■□□□□ 0.65
TOM1-213ENST00000465529 GRXCR2A6NFK2 248 aa19.13■□□□□ 0.65
TOM1-213ENST00000465529 PER2O15055 1255 aa19.13■□□□□ 0.65
TOM1-213ENST00000465529 HOXA2O43364 376 aa19.13■□□□□ 0.65
TOM1-213ENST00000465529 NRIP1P48552 1158 aa19.13■□□□□ 0.65
TOM1-213ENST00000465529 RARRES1P49788 294 aa19.13■□□□□ 0.65
TOM1-213ENST00000465529 TTC38Q5R3I4 469 aa19.13■□□□□ 0.65
TOM1-213ENST00000465529 KCNT2Q6UVM3 1135 aa19.13■□□□□ 0.65
TOM1-213ENST00000465529 NOSTRINQ8IVI9 506 aa19.13■□□□□ 0.65
TOM1-213ENST00000465529 TLR9Q9NR96 1032 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms