RNA–Protein interactions for RNA: ENST00000465315.1

CCDC115-204, Transcript of coiled-coil domain containing 115, humanhuman

TSL 2

Gene CCDC115, Length 3,562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115-204ENST00000465315 ITIH3Q06033 890 aa12.36□□□□□ -0.43
CCDC115-204ENST00000465315 DENND2CQ68D51 928 aa12.36□□□□□ -0.43
CCDC115-204ENST00000465315 PADI6Q6TGC4 694 aa12.36□□□□□ -0.43
CCDC115-204ENST00000465315 NLRP14Q86W24 1093 aa12.36□□□□□ -0.43
CCDC115-204ENST00000465315 CCDC50Q8IVM0 306 aa12.36□□□□□ -0.43
CCDC115-204ENST00000465315 UBL4BQ8N7F7 174 aa12.36□□□□□ -0.43
CCDC115-204ENST00000465315 CHURC1Q8WUH1 139 aa12.36□□□□□ -0.43
CCDC115-204ENST00000465315 SLC20A1Q8WUM9 679 aa12.36□□□□□ -0.43
CCDC115-204ENST00000465315 BTBD6Q96KE9 485 aa12.36□□□□□ -0.43
CCDC115-204ENST00000465315 RAB17Q9H0T7 212 aa12.36□□□□□ -0.43
CCDC115-204ENST00000465315 TRAF3IP3Q9Y228 551 aa12.36□□□□□ -0.43
CCDC115-204ENST00000465315 PCDHA2Q9Y5H9 948 aa12.36□□□□□ -0.43
CCDC115-204ENST00000465315 ARAP2Q8WZ64 1704 aa12.36□□□□□ -0.43
CCDC115-204ENST00000465315 HMGB1P1B2RPK0 211 aaPredicted RBP12.36□□□□□ -0.43
CCDC115-204ENST00000465315 CUL1Q13616 776 aa12.36□□□□□ -0.43
CCDC115-204ENST00000465315 CEP55Q53EZ4 464 aa12.36□□□□□ -0.43
CCDC115-204ENST00000465315 CEP57Q86XR8 500 aa12.36□□□□□ -0.43
CCDC115-204ENST00000465315 RPUSD2Q8IZ73 545 aaKnown RBP12.36□□□□□ -0.43
CCDC115-204ENST00000465315 ARHGEF26Q96DR7 871 aa12.36□□□□□ -0.43
CCDC115-204ENST00000465315 MRRFQ96E11 262 aaKnown RBP12.36□□□□□ -0.43
CCDC115-204ENST00000465315 MYO1FO00160 1098 aa12.35□□□□□ -0.43
CCDC115-204ENST00000465315 SLC16A4O15374 487 aa12.35□□□□□ -0.43
CCDC115-204ENST00000465315 ONECUT3O60422 494 aaPredicted RBP12.35□□□□□ -0.43
CCDC115-204ENST00000465315 SLITRK3O94933 977 aa12.35□□□□□ -0.43
CCDC115-204ENST00000465315 HOXA10P31260 410 aaPredicted RBP12.35□□□□□ -0.43
CCDC115-204ENST00000465315 SSTR3P32745 418 aaPredicted RBP12.35□□□□□ -0.43
CCDC115-204ENST00000465315 MDH1P40925 334 aaKnown RBP12.35□□□□□ -0.43
CCDC115-204ENST00000465315 XKR9Q5GH70 373 aa12.35□□□□□ -0.43
CCDC115-204ENST00000465315 SH3BP5LQ7L8J4 393 aa12.35□□□□□ -0.43
CCDC115-204ENST00000465315 OTUD6AQ7L8S5 288 aa12.35□□□□□ -0.43
CCDC115-204ENST00000465315 ZNF473Q8WTR7 871 aaKnown RBP12.35□□□□□ -0.43
CCDC115-204ENST00000465315 ISCUQ9H1K1 167 aa12.35□□□□□ -0.43
CCDC115-204ENST00000465315 KCNK9Q9NPC2 374 aa12.35□□□□□ -0.43
CCDC115-204ENST00000465315 AGPAT3Q9NRZ7 376 aa12.35□□□□□ -0.43
CCDC115-204ENST00000465315 ASIC3Q9UHC3 531 aa12.35□□□□□ -0.43
CCDC115-204ENST00000465315 SUGT1Q9Y2Z0 365 aa12.35□□□□□ -0.43
CCDC115-204ENST00000465315 MRPL11Q9Y3B7 192 aaKnown RBP12.35□□□□□ -0.43
CCDC115-204ENST00000465315 ZC3H4Q9UPT8 1303 aaKnown RBP12.35□□□□□ -0.43
CCDC115-204ENST00000465315 ZBTB7AO95365 584 aa12.35□□□□□ -0.43
CCDC115-204ENST00000465315 KCNJ1P48048 391 aa12.35□□□□□ -0.43
CCDC115-204ENST00000465315 MTMR3Q13615 1198 aa12.35□□□□□ -0.43
CCDC115-204ENST00000465315 CCDC38Q502W7 563 aa12.35□□□□□ -0.43
CCDC115-204ENST00000465315 LARGE2Q8N3Y3 721 aa12.35□□□□□ -0.43
CCDC115-204ENST00000465315 RFFLQ8WZ73 363 aa12.35□□□□□ -0.43
CCDC115-204ENST00000465315 SCLT1Q96NL6 688 aa12.35□□□□□ -0.43
CCDC115-204ENST00000465315 NEUROG2Q9H2A3 272 aa12.35□□□□□ -0.43
CCDC115-204ENST00000465315 GPRC5CQ9NQ84 441 aa12.35□□□□□ -0.43
CCDC115-204ENST00000465315 RGS17Q9UGC6 210 aaPredicted RBP12.35□□□□□ -0.43
CCDC115-204ENST00000465315 NR2E1Q9Y466 385 aa12.35□□□□□ -0.43
CCDC115-204ENST00000465315 TGFB1I1O43294 461 aa12.35□□□□□ -0.43
CCDC115-204ENST00000465315 CTNND1O60716 968 aaKnown RBP12.35□□□□□ -0.43
CCDC115-204ENST00000465315 HOXD13P35453 343 aa12.35□□□□□ -0.43
CCDC115-204ENST00000465315 COL23A1Q86Y22 540 aaPredicted RBP12.35□□□□□ -0.43
CCDC115-204ENST00000465315 AGBL1Q96MI9 1066 aa12.35□□□□□ -0.43
CCDC115-204ENST00000465315 ZDHHC15Q96MV8 337 aa12.35□□□□□ -0.43
CCDC115-204ENST00000465315 NAP1L3Q99457 506 aaPredicted RBP12.35□□□□□ -0.43
CCDC115-204ENST00000465315 PAIP2Q9BPZ3 127 aaKnown RBP12.35□□□□□ -0.43
CCDC115-204ENST00000465315 WDR18Q9BV38 432 aa12.35□□□□□ -0.43
CCDC115-204ENST00000465315 KIFC3Q9BVG8 833 aa12.35□□□□□ -0.43
CCDC115-204ENST00000465315 MLXIPLQ9NP71 852 aa12.35□□□□□ -0.43
CCDC115-204ENST00000465315 PLCB1Q9NQ66 1216 aa12.35□□□□□ -0.43
CCDC115-204ENST00000465315 MTRF1LQ9UGC7 380 aaKnown RBP12.35□□□□□ -0.43
CCDC115-204ENST00000465315 USTQ9Y2C2 406 aa12.35□□□□□ -0.43
CCDC115-204ENST00000465315 PHF20L1A8MW92 1017 aa12.34□□□□□ -0.43
CCDC115-204ENST00000465315 F8VZ95 297 aa12.34□□□□□ -0.43
CCDC115-204ENST00000465315 CCDC188H7C350 402 aa12.34□□□□□ -0.43
CCDC115-204ENST00000465315 RGS16O15492 202 aaPredicted RBP12.34□□□□□ -0.43
CCDC115-204ENST00000465315 JAG1P78504 1218 aa12.34□□□□□ -0.43
CCDC115-204ENST00000465315 EPC2Q52LR7 807 aa12.34□□□□□ -0.43
CCDC115-204ENST00000465315 PALB2Q86YC2 1186 aa12.34□□□□□ -0.43
CCDC115-204ENST00000465315 IQCKQ8N0W5 287 aa12.34□□□□□ -0.43
CCDC115-204ENST00000465315 SLC30A5Q8TAD4 765 aa12.34□□□□□ -0.43
CCDC115-204ENST00000465315 LNX1Q8TBB1 728 aaPredicted RBP12.34□□□□□ -0.43
CCDC115-204ENST00000465315 ZNF653Q96CK0 615 aa12.34□□□□□ -0.43
CCDC115-204ENST00000465315 FAM84AQ96KN4 292 aa12.34□□□□□ -0.43
CCDC115-204ENST00000465315 CBWD1Q9BRT8 395 aa12.34□□□□□ -0.43
CCDC115-204ENST00000465315 STK33Q9BYT3 514 aa12.34□□□□□ -0.43
CCDC115-204ENST00000465315 TAOK3Q9H2K8 898 aa12.34□□□□□ -0.43
CCDC115-204ENST00000465315 UNC45AQ9H3U1 944 aa12.34□□□□□ -0.43
CCDC115-204ENST00000465315 APEX2Q9UBZ4 518 aa12.34□□□□□ -0.43
CCDC115-204ENST00000465315 RBAK-RBAKDNI3L0D1 243 aa12.34□□□□□ -0.43
CCDC115-204ENST00000465315 ECM2O94769 699 aaPredicted RBP12.34□□□□□ -0.43
CCDC115-204ENST00000465315 MXI1P50539 228 aa12.34□□□□□ -0.43
CCDC115-204ENST00000465315 DLG4P78352 724 aa12.34□□□□□ -0.43
CCDC115-204ENST00000465315 CALCOCO2Q13137 446 aa12.34□□□□□ -0.43
CCDC115-204ENST00000465315 C2CD6Q53TS8 623 aa12.34□□□□□ -0.43
CCDC115-204ENST00000465315 KAT5Q92993 513 aa12.34□□□□□ -0.43
CCDC115-204ENST00000465315 CCDC88AQ3V6T2 1871 aa12.34□□□□□ -0.43
CCDC115-204ENST00000465315 TBX3O15119 743 aa12.34□□□□□ -0.43
CCDC115-204ENST00000465315 RGL2O15211 777 aa12.34□□□□□ -0.43
CCDC115-204ENST00000465315 CYP26A1O43174 497 aa12.34□□□□□ -0.43
CCDC115-204ENST00000465315 LDHDQ86WU2 507 aa12.34□□□□□ -0.43
CCDC115-204ENST00000465315 ANKRD42Q8N9B4 389 aa12.34□□□□□ -0.43
CCDC115-204ENST00000465315 EPN3Q9H201 632 aa12.34□□□□□ -0.43
CCDC115-204ENST00000465315 FAM114A2Q9NRY5 505 aa12.34□□□□□ -0.43
CCDC115-204ENST00000465315 PNMA2Q9UL42 364 aa12.34□□□□□ -0.43
CCDC115-204ENST00000465315 MTUS1Q9ULD2 1270 aa12.34□□□□□ -0.43
CCDC115-204ENST00000465315 ALG6Q9Y672 507 aa12.34□□□□□ -0.43
CCDC115-204ENST00000465315 RPS6KA5O75582 802 aa12.33□□□□□ -0.44
CCDC115-204ENST00000465315 CALCAP01258 141 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms