RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 TGM1P22735 817 aa17.04■□□□□ 0.32
HDAC6-214ENST00000465269 CSTF1Q05048 431 aaKnown RBP17.04■□□□□ 0.32
HDAC6-214ENST00000465269 PHLDB3Q6NSJ2 640 aa17.04■□□□□ 0.32
HDAC6-214ENST00000465269 PDXDC2PQ6P474 469 aa17.04■□□□□ 0.32
HDAC6-214ENST00000465269 ABHD15Q6UXT9 468 aa17.04■□□□□ 0.32
HDAC6-214ENST00000465269 LRRC71Q8N4P6 559 aa17.04■□□□□ 0.32
HDAC6-214ENST00000465269 RPP25Q9BUL9 199 aaKnown RBP17.04■□□□□ 0.32
HDAC6-214ENST00000465269 DSCC1Q9BVC3 393 aa17.04■□□□□ 0.32
HDAC6-214ENST00000465269 LNPKQ9C0E8 428 aa17.04■□□□□ 0.32
HDAC6-214ENST00000465269 ADAMTS10Q9H324 1103 aa17.04■□□□□ 0.32
HDAC6-214ENST00000465269 NRDE2Q9H7Z3 1164 aa17.04■□□□□ 0.32
HDAC6-214ENST00000465269 AGO4Q9HCK5 861 aaKnown RBP17.04■□□□□ 0.32
HDAC6-214ENST00000465269 MAN1C1Q9NR34 630 aa17.04■□□□□ 0.32
HDAC6-214ENST00000465269 SPATA6Q9NWH7 488 aaPredicted RBP17.04■□□□□ 0.32
HDAC6-214ENST00000465269 SMG5Q9UPR3 1016 aaKnown RBP17.04■□□□□ 0.32
HDAC6-214ENST00000465269 INPP5FQ9Y2H2 1132 aa17.04■□□□□ 0.32
HDAC6-214ENST00000465269 NFASCO94856 1347 aa17.03■□□□□ 0.32
HDAC6-214ENST00000465269 CCDC195A0A1B0GUA6 201 aa17.03■□□□□ 0.32
HDAC6-214ENST00000465269 SPDYE3A6NKU9 549 aa17.03■□□□□ 0.32
HDAC6-214ENST00000465269 C2CD2LO14523 706 aa17.03■□□□□ 0.32
HDAC6-214ENST00000465269 GALTP07902 379 aa17.03■□□□□ 0.32
HDAC6-214ENST00000465269 SLC11A1P49279 550 aa17.03■□□□□ 0.32
HDAC6-214ENST00000465269 ZNF484Q5JVG2 852 aa17.03■□□□□ 0.32
HDAC6-214ENST00000465269 SWSAP1Q6NVH7 229 aa17.03■□□□□ 0.32
HDAC6-214ENST00000465269 TSSK4Q6SA08 328 aa17.03■□□□□ 0.32
HDAC6-214ENST00000465269 DIAPH3Q9NSV4 1193 aa17.03■□□□□ 0.32
HDAC6-214ENST00000465269 AKT3Q9Y243 479 aa17.03■□□□□ 0.32
HDAC6-214ENST00000465269 COL1A2P08123 1366 aa17.02■□□□□ 0.32
HDAC6-214ENST00000465269 CLUHO75153 1309 aa17.02■□□□□ 0.32
HDAC6-214ENST00000465269 A0A0U1RQF3 1178 aa17.02■□□□□ 0.32
HDAC6-214ENST00000465269 SPATA31D3P0C874 917 aa17.02■□□□□ 0.32
HDAC6-214ENST00000465269 KCNA4P22459 653 aa17.02■□□□□ 0.32
HDAC6-214ENST00000465269 POLGP54098 1239 aaPredicted RBP17.02■□□□□ 0.32
HDAC6-214ENST00000465269 PPM1JQ5JR12 505 aa17.02■□□□□ 0.32
HDAC6-214ENST00000465269 SPATA31D4Q6ZUB0 917 aa17.02■□□□□ 0.32
HDAC6-214ENST00000465269 PPFIBP1Q86W92 1011 aa17.02■□□□□ 0.32
HDAC6-214ENST00000465269 RAB11FIP4Q86YS3 637 aa17.02■□□□□ 0.32
HDAC6-214ENST00000465269 CKAP2LQ8IYA6 745 aa17.02■□□□□ 0.32
HDAC6-214ENST00000465269 SRBD1Q8N5C6 995 aaKnown RBP17.02■□□□□ 0.32
HDAC6-214ENST00000465269 SPZ1Q9BXG8 430 aa17.02■□□□□ 0.32
HDAC6-214ENST00000465269 MRPL9Q9BYD2 267 aaKnown RBP17.02■□□□□ 0.32
HDAC6-214ENST00000465269 WDR6Q9NNW5 1121 aaKnown RBP17.02■□□□□ 0.32
HDAC6-214ENST00000465269 ZNF302Q9NR11 478 aa17.02■□□□□ 0.32
HDAC6-214ENST00000465269 TBC1D13Q9NVG8 400 aa17.02■□□□□ 0.32
HDAC6-214ENST00000465269 EPS15L1Q9UBC2 864 aa17.02■□□□□ 0.32
HDAC6-214ENST00000465269 SEC63Q9UGP8 760 aaKnown RBP17.02■□□□□ 0.32
HDAC6-214ENST00000465269 SETXQ7Z333 2677 aaKnown RBP17.01■□□□□ 0.31
HDAC6-214ENST00000465269 MAFGO15525 162 aa17.01■□□□□ 0.31
HDAC6-214ENST00000465269 RXRAP19793 462 aa17.01■□□□□ 0.31
HDAC6-214ENST00000465269 CD72P21854 359 aa17.01■□□□□ 0.31
HDAC6-214ENST00000465269 EIF4BP23588 611 aaKnown RBP17.01■□□□□ 0.31
HDAC6-214ENST00000465269 LMNB2Q03252 620 aa17.01■□□□□ 0.31
HDAC6-214ENST00000465269 SNW1Q13573 536 aaKnown RBP17.01■□□□□ 0.31
HDAC6-214ENST00000465269 LPAL2Q16609 132 aa17.01■□□□□ 0.31
HDAC6-214ENST00000465269 FAM160B1Q5W0V3 765 aa17.01■□□□□ 0.31
HDAC6-214ENST00000465269 C15orf39Q6ZRI6 1047 aa17.01■□□□□ 0.31
HDAC6-214ENST00000465269 GET4Q7L5D6 327 aaPredicted RBP17.01■□□□□ 0.31
HDAC6-214ENST00000465269 CATIPQ7Z7H3 387 aa17.01■□□□□ 0.31
HDAC6-214ENST00000465269 ZNF280BQ86YH2 543 aa17.01■□□□□ 0.31
HDAC6-214ENST00000465269 RTKNQ9BST9 563 aa17.01■□□□□ 0.31
HDAC6-214ENST00000465269 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.01■□□□□ 0.31
HDAC6-214ENST00000465269 NUMBLQ9Y6R0 609 aa17.01■□□□□ 0.31
HDAC6-214ENST00000465269 MIA3Q5JRA6 1907 aa17.01■□□□□ 0.31
HDAC6-214ENST00000465269 IGF2RP11717 2491 aa17.01■□□□□ 0.31
HDAC6-214ENST00000465269 INPPL1O15357 1258 aa17■□□□□ 0.31
HDAC6-214ENST00000465269 LAMTOR5O43504 91 aa17■□□□□ 0.31
HDAC6-214ENST00000465269 LILRB3O75022 631 aa17■□□□□ 0.31
HDAC6-214ENST00000465269 SDHBP21912 280 aa17■□□□□ 0.31
HDAC6-214ENST00000465269 KIF5BP33176 963 aa17■□□□□ 0.31
HDAC6-214ENST00000465269 SLC26A2P50443 739 aa17■□□□□ 0.31
HDAC6-214ENST00000465269 ANTXR2P58335 489 aa17■□□□□ 0.31
HDAC6-214ENST00000465269 GPC5P78333 572 aa17■□□□□ 0.31
HDAC6-214ENST00000465269 HTR4Q13639 388 aa17■□□□□ 0.31
HDAC6-214ENST00000465269 GIT2Q14161 759 aa17■□□□□ 0.31
HDAC6-214ENST00000465269 NONOQ15233 471 aaKnown RBP eCLIP17■□□□□ 0.31
HDAC6-214ENST00000465269 TAS1R1Q7RTX1 841 aa17■□□□□ 0.31
HDAC6-214ENST00000465269 TICAM2Q86XR7 235 aa17■□□□□ 0.31
HDAC6-214ENST00000465269 CCDC82Q8N4S0 544 aa17■□□□□ 0.31
HDAC6-214ENST00000465269 ATRIPQ8WXE1 791 aa17■□□□□ 0.31
HDAC6-214ENST00000465269 BBXQ8WY36 941 aaPredicted RBP17■□□□□ 0.31
HDAC6-214ENST00000465269 ZNF707Q96C28 371 aaPredicted RBP17■□□□□ 0.31
HDAC6-214ENST00000465269 DOCK6Q96HP0 2047 aa17■□□□□ 0.31
HDAC6-214ENST00000465269 EMILIN2Q9BXX0 1053 aa17■□□□□ 0.31
HDAC6-214ENST00000465269 PATJQ8NI35 1801 aa17■□□□□ 0.31
HDAC6-214ENST00000465269 ERICH2A1L162 156 aa16.99■□□□□ 0.31
HDAC6-214ENST00000465269 PRR5-ARHGAP8B1AHC4 643 aa16.99■□□□□ 0.31
HDAC6-214ENST00000465269 SPTLC1O15269 473 aa16.99■□□□□ 0.31
HDAC6-214ENST00000465269 AFF1P51825 1210 aaKnown RBP16.99■□□□□ 0.31
HDAC6-214ENST00000465269 ARHGAP8P85298 464 aa16.99■□□□□ 0.31
HDAC6-214ENST00000465269 UBXN2BQ14CS0 331 aa16.99■□□□□ 0.31
HDAC6-214ENST00000465269 EFCAB12Q6NXP0 572 aa16.99■□□□□ 0.31
HDAC6-214ENST00000465269 LINC01465Q8N7H1 131 aa16.99■□□□□ 0.31
HDAC6-214ENST00000465269 SMG7Q92540 1137 aaKnown RBP16.99■□□□□ 0.31
HDAC6-214ENST00000465269 CYP21A2P08686 494 aa16.98■□□□□ 0.31
HDAC6-214ENST00000465269 LAMP2P13473 410 aa16.98■□□□□ 0.31
HDAC6-214ENST00000465269 DARSP14868 501 aaKnown RBP16.98■□□□□ 0.31
HDAC6-214ENST00000465269 AK2P54819 239 aa16.98■□□□□ 0.31
HDAC6-214ENST00000465269 STARD6P59095 220 aa16.98■□□□□ 0.31
HDAC6-214ENST00000465269 RNASELQ05823 741 aaKnown RBP16.98■□□□□ 0.31
HDAC6-214ENST00000465269 SPEM2Q0P670 501 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms