RNA–Protein interactions for RNA: ENST00000465268.1

MRPL55-225, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 848 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-225ENST00000465268 CLEC1BQ9P126 229 aa16.7■□□□□ 0.26
MRPL55-225ENST00000465268 EVPLQ92817 2033 aa16.7■□□□□ 0.26
MRPL55-225ENST00000465268 LOXHD1Q8IVV2 1947 aa16.7■□□□□ 0.26
MRPL55-225ENST00000465268 RALGAPA2Q2PPJ7 1873 aa16.69■□□□□ 0.26
MRPL55-225ENST00000465268 A0A087WWV3 80 aa16.69■□□□□ 0.26
MRPL55-225ENST00000465268 FSCN2O14926 492 aa16.69■□□□□ 0.26
MRPL55-225ENST00000465268 EIF5BO60841 1220 aaKnown RBP16.69■□□□□ 0.26
MRPL55-225ENST00000465268 SLITRK3O94933 977 aa16.69■□□□□ 0.26
MRPL55-225ENST00000465268 GLP2RO95838 553 aa16.69■□□□□ 0.26
MRPL55-225ENST00000465268 CCDC83Q8IWF9 413 aa16.69■□□□□ 0.26
MRPL55-225ENST00000465268 C4orf19Q8IY42 314 aa16.69■□□□□ 0.26
MRPL55-225ENST00000465268 THNSL1Q8IYQ7 743 aa16.69■□□□□ 0.26
MRPL55-225ENST00000465268 ZNF710Q8N1W2 664 aa16.69■□□□□ 0.26
MRPL55-225ENST00000465268 VN1R2Q8NFZ6 395 aa16.69■□□□□ 0.26
MRPL55-225ENST00000465268 HELQQ8TDG4 1101 aa16.69■□□□□ 0.26
MRPL55-225ENST00000465268 LPPQ93052 612 aa16.69■□□□□ 0.26
MRPL55-225ENST00000465268 TMEM60Q9H2L4 133 aa16.69■□□□□ 0.26
MRPL55-225ENST00000465268 DHX33Q9H6R0 707 aaKnown RBP16.69■□□□□ 0.26
MRPL55-225ENST00000465268 MINDY3Q9H8M7 445 aa16.69■□□□□ 0.26
MRPL55-225ENST00000465268 PCDHB12Q9Y5F1 795 aa16.69■□□□□ 0.26
MRPL55-225ENST00000465268 NCOR1O75376 2440 aa16.69■□□□□ 0.26
MRPL55-225ENST00000465268 ATG2AQ2TAZ0 1938 aa16.68■□□□□ 0.26
MRPL55-225ENST00000465268 FAM86C2PA6NEL3 165 aa16.68■□□□□ 0.26
MRPL55-225ENST00000465268 MBTPS2O43462 519 aa16.68■□□□□ 0.26
MRPL55-225ENST00000465268 NCK2O43639 380 aa16.68■□□□□ 0.26
MRPL55-225ENST00000465268 MARCH6O60337 910 aa16.68■□□□□ 0.26
MRPL55-225ENST00000465268 YWHABP31946 246 aaKnown RBP16.68■□□□□ 0.26
MRPL55-225ENST00000465268 PHKA2P46019 1235 aa16.68■□□□□ 0.26
MRPL55-225ENST00000465268 DNM2P50570 870 aa16.68■□□□□ 0.26
MRPL55-225ENST00000465268 C8orf34Q49A92 452 aa16.68■□□□□ 0.26
MRPL55-225ENST00000465268 ZNF410Q86VK4 478 aa16.68■□□□□ 0.26
MRPL55-225ENST00000465268 PRPF31Q8WWY3 499 aaKnown RBP16.68■□□□□ 0.26
MRPL55-225ENST00000465268 MSLNLQ96KJ4 702 aa16.68■□□□□ 0.26
MRPL55-225ENST00000465268 MTMR9Q96QG7 549 aa16.68■□□□□ 0.26
MRPL55-225ENST00000465268 HSD17B14Q9BPX1 270 aa16.68■□□□□ 0.26
MRPL55-225ENST00000465268 EIF2AK1Q9BQI3 630 aaKnown RBP16.68■□□□□ 0.26
MRPL55-225ENST00000465268 XPNPEP1Q9NQW7 623 aa16.68■□□□□ 0.26
MRPL55-225ENST00000465268 BARX2Q9UMQ3 279 aaPredicted RBP16.68■□□□□ 0.26
MRPL55-225ENST00000465268 SRGAP2CP0DJJ0 459 aa16.67■□□□□ 0.26
MRPL55-225ENST00000465268 LAG3P18627 525 aa16.67■□□□□ 0.26
MRPL55-225ENST00000465268 ZP2Q05996 745 aa16.67■□□□□ 0.26
MRPL55-225ENST00000465268 CALCRLQ16602 461 aa16.67■□□□□ 0.26
MRPL55-225ENST00000465268 PUS10Q3MIT2 529 aaKnown RBP16.67■□□□□ 0.26
MRPL55-225ENST00000465268 KCNT2Q6UVM3 1135 aa16.67■□□□□ 0.26
MRPL55-225ENST00000465268 TPH2Q8IWU9 490 aa16.67■□□□□ 0.26
MRPL55-225ENST00000465268 SLFN12Q8IYM2 578 aa16.67■□□□□ 0.26
MRPL55-225ENST00000465268 EFHBQ8N7U6 833 aa16.67■□□□□ 0.26
MRPL55-225ENST00000465268 MICAL1Q8TDZ2 1067 aa16.67■□□□□ 0.26
MRPL55-225ENST00000465268 NAP1L4Q99733 375 aaKnown RBP16.67■□□□□ 0.26
MRPL55-225ENST00000465268 ZSWIM4Q9H7M6 989 aa16.67■□□□□ 0.26
MRPL55-225ENST00000465268 BRMS1Q9HCU9 246 aa16.67■□□□□ 0.26
MRPL55-225ENST00000465268 TLR9Q9NR96 1032 aa16.67■□□□□ 0.26
MRPL55-225ENST00000465268 CHST12Q9NRB3 414 aa16.67■□□□□ 0.26
MRPL55-225ENST00000465268 AAASQ9NRG9 546 aa16.67■□□□□ 0.26
MRPL55-225ENST00000465268 PIN4Q9Y237 131 aaKnown RBP16.67■□□□□ 0.26
MRPL55-225ENST00000465268 COL4A3BPQ9Y5P4 624 aa16.67■□□□□ 0.26
MRPL55-225ENST00000465268 C5orf42Q9H799 3197 aa16.67■□□□□ 0.26
MRPL55-225ENST00000465268 KIAA1671Q9BY89 1806 aa16.66■□□□□ 0.26
MRPL55-225ENST00000465268 C19orf67A6NJJ6 358 aa16.66■□□□□ 0.26
MRPL55-225ENST00000465268 HIDE1A8MVS5 230 aa16.66■□□□□ 0.26
MRPL55-225ENST00000465268 NT5C1B-RDH14C9J2C7 533 aa16.66■□□□□ 0.26
MRPL55-225ENST00000465268 PI4K2BG5E9Z4 385 aa16.66■□□□□ 0.26
MRPL55-225ENST00000465268 EOMESO95936 686 aa16.66■□□□□ 0.26
MRPL55-225ENST00000465268 ATP2B1P20020 1258 aa16.66■□□□□ 0.26
MRPL55-225ENST00000465268 SFPQP23246 707 aaKnown RBP eCLIP16.66■□□□□ 0.26
MRPL55-225ENST00000465268 HOXA11P31270 313 aaPredicted RBP16.66■□□□□ 0.26
MRPL55-225ENST00000465268 SSTR3P32745 418 aaPredicted RBP16.66■□□□□ 0.26
MRPL55-225ENST00000465268 TXKP42681 527 aa16.66■□□□□ 0.26
MRPL55-225ENST00000465268 NDUFV1P49821 464 aa16.66■□□□□ 0.26
MRPL55-225ENST00000465268 AFF1P51825 1210 aaKnown RBP16.66■□□□□ 0.26
MRPL55-225ENST00000465268 POLGP54098 1239 aaPredicted RBP16.66■□□□□ 0.26
MRPL55-225ENST00000465268 CDC42EP1Q00587 391 aa16.66■□□□□ 0.26
MRPL55-225ENST00000465268 PLCB3Q01970 1234 aa16.66■□□□□ 0.26
MRPL55-225ENST00000465268 UBE3AQ05086 875 aa16.66■□□□□ 0.26
MRPL55-225ENST00000465268 LAMTOR4Q0VGL1 99 aa16.66■□□□□ 0.26
MRPL55-225ENST00000465268 EMC2Q15006 297 aa16.66■□□□□ 0.26
MRPL55-225ENST00000465268 SMAD2Q15796 467 aaKnown RBP16.66■□□□□ 0.26
MRPL55-225ENST00000465268 XKR9Q5GH70 373 aa16.66■□□□□ 0.26
MRPL55-225ENST00000465268 PLPP4Q5VZY2 271 aa16.66■□□□□ 0.26
MRPL55-225ENST00000465268 CATSPER4Q7RTX7 472 aa16.66■□□□□ 0.26
MRPL55-225ENST00000465268 TMEM173Q86WV6 379 aaPredicted RBP16.66■□□□□ 0.26
MRPL55-225ENST00000465268 LRRC43Q8N309 656 aa16.66■□□□□ 0.26
MRPL55-225ENST00000465268 SLC7A3Q8WY07 619 aa16.66■□□□□ 0.26
MRPL55-225ENST00000465268 MRPS27Q92552 414 aaKnown RBP16.66■□□□□ 0.26
MRPL55-225ENST00000465268 LRFN3Q9BTN0 628 aa16.66■□□□□ 0.26
MRPL55-225ENST00000465268 RNF216Q9NWF9 866 aaPredicted RBP16.66■□□□□ 0.26
MRPL55-225ENST00000465268 CD207Q9UJ71 328 aa16.66■□□□□ 0.26
MRPL55-225ENST00000465268 LIMCH1Q9UPQ0 1083 aa16.66■□□□□ 0.26
MRPL55-225ENST00000465268 MYH9P35579 1960 aaKnown RBP16.66■□□□□ 0.26
MRPL55-225ENST00000465268 HOXA2O43364 376 aa16.65■□□□□ 0.26
MRPL55-225ENST00000465268 B4GALT3O60512 393 aa16.65■□□□□ 0.26
MRPL55-225ENST00000465268 BAG4O95429 457 aaKnown RBP16.65■□□□□ 0.26
MRPL55-225ENST00000465268 RFC5P40937 340 aa16.65■□□□□ 0.26
MRPL55-225ENST00000465268 DUSP6Q16828 381 aa16.65■□□□□ 0.26
MRPL55-225ENST00000465268 UBXN11Q5T124 520 aa16.65■□□□□ 0.26
MRPL55-225ENST00000465268 TWF2Q6IBS0 349 aaKnown RBP16.65■□□□□ 0.26
MRPL55-225ENST00000465268 ABI1Q8IZP0 508 aa16.65■□□□□ 0.26
MRPL55-225ENST00000465268 SLC39A11Q8N1S5 342 aa16.65■□□□□ 0.26
MRPL55-225ENST00000465268 ZNF558Q96NG5 402 aa16.65■□□□□ 0.26
MRPL55-225ENST00000465268 TRAIPQ9BWF2 469 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms