RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 RPA1P27694 616 aa19.44■□□□□ 0.7
CPSF4-209ENST00000465132 LTBRP36941 435 aa19.44■□□□□ 0.7
CPSF4-209ENST00000465132 PLCB4Q15147 1175 aa19.44■□□□□ 0.7
CPSF4-209ENST00000465132 CRIPAKQ8N1N5 446 aa19.44■□□□□ 0.7
CPSF4-209ENST00000465132 SNX29Q8TEQ0 813 aa19.44■□□□□ 0.7
CPSF4-209ENST00000465132 CCDC43Q96MW1 224 aaKnown RBP19.44■□□□□ 0.7
CPSF4-209ENST00000465132 EIF2AK1Q9BQI3 630 aaKnown RBP19.44■□□□□ 0.7
CPSF4-209ENST00000465132 GABBR1Q9UBS5 961 aa19.44■□□□□ 0.7
CPSF4-209ENST00000465132 FBXO2Q9UK22 296 aaPredicted RBP19.44■□□□□ 0.7
CPSF4-209ENST00000465132 FAM50BQ9Y247 325 aa19.44■□□□□ 0.7
CPSF4-209ENST00000465132 PPME1Q9Y570 386 aa19.44■□□□□ 0.7
CPSF4-209ENST00000465132 PCDHA2Q9Y5H9 948 aa19.44■□□□□ 0.7
CPSF4-209ENST00000465132 MAFBQ9Y5Q3 323 aaPredicted RBP19.44■□□□□ 0.7
CPSF4-209ENST00000465132 TRPV2Q9Y5S1 764 aa19.44■□□□□ 0.7
CPSF4-209ENST00000465132 LOXHD1Q8IVV2 1947 aa19.44■□□□□ 0.7
CPSF4-209ENST00000465132 POTEMA6NI47 508 aa19.43■□□□□ 0.7
CPSF4-209ENST00000465132 XRCC6P12956 609 aaKnown RBP eCLIP19.43■□□□□ 0.7
CPSF4-209ENST00000465132 CCT6AP40227 531 aaKnown RBP19.43■□□□□ 0.7
CPSF4-209ENST00000465132 TMEM62Q0P6H9 643 aa19.43■□□□□ 0.7
CPSF4-209ENST00000465132 CTC1Q2NKJ3 1217 aa19.43■□□□□ 0.7
CPSF4-209ENST00000465132 ADALQ6DHV7 355 aa19.43■□□□□ 0.7
CPSF4-209ENST00000465132 CLEC17AQ6ZS10 378 aa19.43■□□□□ 0.7
CPSF4-209ENST00000465132 RTN4RL1Q86UN2 441 aaPredicted RBP19.43■□□□□ 0.7
CPSF4-209ENST00000465132 TRAPPC12Q8WVT3 735 aa19.43■□□□□ 0.7
CPSF4-209ENST00000465132 BBXQ8WY36 941 aaPredicted RBP19.43■□□□□ 0.7
CPSF4-209ENST00000465132 GJA10Q969M2 543 aa19.43■□□□□ 0.7
CPSF4-209ENST00000465132 NACC1Q96RE7 527 aa19.43■□□□□ 0.7
CPSF4-209ENST00000465132 PLVAPQ9BX97 442 aa19.43■□□□□ 0.7
CPSF4-209ENST00000465132 FTHL17Q9BXU8 183 aa19.43■□□□□ 0.7
CPSF4-209ENST00000465132 PRKAG3Q9UGI9 489 aa19.43■□□□□ 0.7
CPSF4-209ENST00000465132 WDR81Q562E7 1941 aa19.43■□□□□ 0.7
CPSF4-209ENST00000465132 TTC3P53804 2025 aa19.42■□□□□ 0.7
CPSF4-209ENST00000465132 POTEB3A0JP26 581 aa19.42■□□□□ 0.7
CPSF4-209ENST00000465132 M0QZ92 97 aa19.42■□□□□ 0.7
CPSF4-209ENST00000465132 LYPLA2O95372 231 aa19.42■□□□□ 0.7
CPSF4-209ENST00000465132 ALADP13716 330 aa19.42■□□□□ 0.7
CPSF4-209ENST00000465132 ZP2Q05996 745 aa19.42■□□□□ 0.7
CPSF4-209ENST00000465132 HYAL1Q12794 435 aa19.42■□□□□ 0.7
CPSF4-209ENST00000465132 XKR3Q5GH77 459 aa19.42■□□□□ 0.7
CPSF4-209ENST00000465132 POTEBQ6S5H4 581 aa19.42■□□□□ 0.7
CPSF4-209ENST00000465132 TPH2Q8IWU9 490 aa19.42■□□□□ 0.7
CPSF4-209ENST00000465132 C4orf19Q8IY42 314 aa19.42■□□□□ 0.7
CPSF4-209ENST00000465132 CMTR2Q8IYT2 770 aaKnown RBP19.42■□□□□ 0.7
CPSF4-209ENST00000465132 CCDC34Q96HJ3 373 aa19.42■□□□□ 0.7
CPSF4-209ENST00000465132 HSD17B14Q9BPX1 270 aa19.42■□□□□ 0.7
CPSF4-209ENST00000465132 CELF4Q9BZC1 486 aaKnown RBP19.42■□□□□ 0.7
CPSF4-209ENST00000465132 CCSER1Q9C0I3 900 aa19.42■□□□□ 0.7
CPSF4-209ENST00000465132 CSRNP2Q9H175 543 aa19.42■□□□□ 0.7
CPSF4-209ENST00000465132 PADI3Q9ULW8 664 aa19.42■□□□□ 0.7
CPSF4-209ENST00000465132 MRPL42Q9Y6G3 142 aaKnown RBP19.42■□□□□ 0.7
CPSF4-209ENST00000465132 IGSF9BQ9UPX0 1349 aa19.42■□□□□ 0.7
CPSF4-209ENST00000465132 PRR33A8MZF0 331 aa19.41■□□□□ 0.7
CPSF4-209ENST00000465132 HBP1O60381 514 aa19.41■□□□□ 0.7
CPSF4-209ENST00000465132 CABP7Q86V35 215 aa19.41■□□□□ 0.7
CPSF4-209ENST00000465132 NPAS4Q8IUM7 802 aa19.41■□□□□ 0.7
CPSF4-209ENST00000465132 CCDC60Q8IWA6 550 aaPredicted RBP19.41■□□□□ 0.7
CPSF4-209ENST00000465132 ATP8B4Q8TF62 1192 aa19.41■□□□□ 0.7
CPSF4-209ENST00000465132 LXNQ9BS40 222 aa19.41■□□□□ 0.7
CPSF4-209ENST00000465132 PCDHA7Q9UN72 937 aa19.41■□□□□ 0.7
CPSF4-209ENST00000465132 PLAGL2Q9UPG8 496 aa19.41■□□□□ 0.7
CPSF4-209ENST00000465132 SMIM35A0A1B0GVV1 85 aa19.4■□□□□ 0.7
CPSF4-209ENST00000465132 A0A1W2PQ27 194 aa19.4■□□□□ 0.7
CPSF4-209ENST00000465132 A0A1W2PQ64 194 aa19.4■□□□□ 0.7
CPSF4-209ENST00000465132 A0A1W2PQD8 194 aa19.4■□□□□ 0.7
CPSF4-209ENST00000465132 C19orf67A6NJJ6 358 aa19.4■□□□□ 0.7
CPSF4-209ENST00000465132 EML1O00423 815 aa19.4■□□□□ 0.7
CPSF4-209ENST00000465132 DLX2Q07687 328 aaPredicted RBP19.4■□□□□ 0.7
CPSF4-209ENST00000465132 PAK2Q13177 524 aa19.4■□□□□ 0.7
CPSF4-209ENST00000465132 CAMK1Q14012 370 aa19.4■□□□□ 0.7
CPSF4-209ENST00000465132 ZNF484Q5JVG2 852 aa19.4■□□□□ 0.7
CPSF4-209ENST00000465132 MTHFD1LQ6UB35 978 aa19.4■□□□□ 0.7
CPSF4-209ENST00000465132 CCDC73Q6ZRK6 1079 aa19.4■□□□□ 0.7
CPSF4-209ENST00000465132 ADHFE1Q8IWW8 467 aa19.4■□□□□ 0.7
CPSF4-209ENST00000465132 NME8Q8N427 588 aa19.4■□□□□ 0.7
CPSF4-209ENST00000465132 P2RX5Q93086 422 aa19.4■□□□□ 0.7
CPSF4-209ENST00000465132 DYDC2Q96IM9 177 aa19.4■□□□□ 0.7
CPSF4-209ENST00000465132 JPH2Q9BR39 696 aaPredicted RBP19.4■□□□□ 0.7
CPSF4-209ENST00000465132 ALG13Q9NP73 1137 aaKnown RBP19.4■□□□□ 0.7
CPSF4-209ENST00000465132 DNM3Q9UQ16 869 aa19.4■□□□□ 0.7
CPSF4-209ENST00000465132 COL1A2P08123 1366 aa19.4■□□□□ 0.7
CPSF4-209ENST00000465132 MYO7AQ13402 2215 aa19.4■□□□□ 0.7
CPSF4-209ENST00000465132 DCXO43602 365 aa19.39■□□□□ 0.69
CPSF4-209ENST00000465132 SLITRK3O94933 977 aa19.39■□□□□ 0.69
CPSF4-209ENST00000465132 CSPG5O95196 566 aa19.39■□□□□ 0.69
CPSF4-209ENST00000465132 OATP04181 439 aa19.39■□□□□ 0.69
CPSF4-209ENST00000465132 STAG3L1P0CL83 205 aa19.39■□□□□ 0.69
CPSF4-209ENST00000465132 CMA1P23946 247 aa19.39■□□□□ 0.69
CPSF4-209ENST00000465132 HOXD11P31277 338 aaPredicted RBP19.39■□□□□ 0.69
CPSF4-209ENST00000465132 GTF2F1P35269 517 aaKnown RBP eCLIP19.39■□□□□ 0.69
CPSF4-209ENST00000465132 CYP4A11Q02928 519 aa19.39■□□□□ 0.69
CPSF4-209ENST00000465132 IL17AQ16552 155 aa19.39■□□□□ 0.69
CPSF4-209ENST00000465132 NAALADL2Q58DX5 795 aa19.39■□□□□ 0.69
CPSF4-209ENST00000465132 CATSPER3Q86XQ3 398 aa19.39■□□□□ 0.69
CPSF4-209ENST00000465132 TMX1Q9H3N1 280 aa19.39■□□□□ 0.69
CPSF4-209ENST00000465132 ANKEF1Q9NU02 776 aa19.39■□□□□ 0.69
CPSF4-209ENST00000465132 DDX11L8A8MPP1 907 aa19.38■□□□□ 0.69
CPSF4-209ENST00000465132 ITGB1P05556 798 aa19.38■□□□□ 0.69
CPSF4-209ENST00000465132 DNAJB1P25685 340 aa19.38■□□□□ 0.69
CPSF4-209ENST00000465132 KLRC1P26715 233 aa19.38■□□□□ 0.69
CPSF4-209ENST00000465132 PRKCEQ02156 737 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms