RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 ALDH5A1P51649 535 aaPredicted RBP13.62□□□□□ -0.23
CLCNKA-204ENST00000464764 ADCY1Q08828 1119 aa13.62□□□□□ -0.23
CLCNKA-204ENST00000464764 MAPK7Q13164 816 aa13.62□□□□□ -0.23
CLCNKA-204ENST00000464764 LONRF1Q17RB8 773 aa13.62□□□□□ -0.23
CLCNKA-204ENST00000464764 PRR16Q569H4 304 aa13.62□□□□□ -0.23
CLCNKA-204ENST00000464764 BARGINQ6ZT62 677 aa13.62□□□□□ -0.23
CLCNKA-204ENST00000464764 PGM2Q96G03 612 aa13.62□□□□□ -0.23
CLCNKA-204ENST00000464764 SETDB2Q96T68 719 aa13.62□□□□□ -0.23
CLCNKA-204ENST00000464764 RUSC1Q9BVN2 902 aa13.62□□□□□ -0.23
CLCNKA-204ENST00000464764 DNAJC17Q9NVM6 304 aaKnown RBP13.62□□□□□ -0.23
CLCNKA-204ENST00000464764 DNAJC12Q9UKB3 198 aa13.62□□□□□ -0.23
CLCNKA-204ENST00000464764 A0A0A6YYK5 440 aaPredicted RBP13.61□□□□□ -0.23
CLCNKA-204ENST00000464764 CCDC169A6NNP5 214 aa13.61□□□□□ -0.23
CLCNKA-204ENST00000464764 ZBTB39O15060 712 aa13.61□□□□□ -0.23
CLCNKA-204ENST00000464764 DIAPH2O60879 1101 aa13.61□□□□□ -0.23
CLCNKA-204ENST00000464764 SMARCA1P28370 1054 aa13.61□□□□□ -0.23
CLCNKA-204ENST00000464764 RHBDL3P58872 404 aa13.61□□□□□ -0.23
CLCNKA-204ENST00000464764 GSTO1P78417 241 aa13.61□□□□□ -0.23
CLCNKA-204ENST00000464764 CRYMQ14894 314 aa13.61□□□□□ -0.23
CLCNKA-204ENST00000464764 PRELID2Q8N945 189 aa13.61□□□□□ -0.23
CLCNKA-204ENST00000464764 CTNNBL1Q8WYA6 563 aaPredicted RBP13.61□□□□□ -0.23
CLCNKA-204ENST00000464764 RFFLQ8WZ73 363 aa13.61□□□□□ -0.23
CLCNKA-204ENST00000464764 DDX23Q9BUQ8 820 aaKnown RBP13.61□□□□□ -0.23
CLCNKA-204ENST00000464764 ALG6Q9Y672 507 aa13.61□□□□□ -0.23
CLCNKA-204ENST00000464764 KDM3AQ9Y4C1 1321 aa13.61□□□□□ -0.23
CLCNKA-204ENST00000464764 TCP11X1B4DZS4 312 aa13.61□□□□□ -0.23
CLCNKA-204ENST00000464764 UBAP1LF5GYI3 381 aa13.61□□□□□ -0.23
CLCNKA-204ENST00000464764 IGF2BP3O00425 579 aaKnown RBP eCLIP13.61□□□□□ -0.23
CLCNKA-204ENST00000464764 SPATA31C1P0DKV0 1188 aa13.61□□□□□ -0.23
CLCNKA-204ENST00000464764 NMT1P30419 496 aaKnown RBP13.61□□□□□ -0.23
CLCNKA-204ENST00000464764 PTGIRP43119 386 aa13.61□□□□□ -0.23
CLCNKA-204ENST00000464764 NCALDP61601 193 aa13.61□□□□□ -0.23
CLCNKA-204ENST00000464764 AUHQ13825 339 aaKnown RBP13.61□□□□□ -0.23
CLCNKA-204ENST00000464764 CNGA2Q16280 664 aa13.61□□□□□ -0.23
CLCNKA-204ENST00000464764 CBWD6Q4V339 395 aa13.61□□□□□ -0.23
CLCNKA-204ENST00000464764 CBWD3Q5JTY5 395 aa13.61□□□□□ -0.23
CLCNKA-204ENST00000464764 CBWD5Q5RIA9 395 aa13.61□□□□□ -0.23
CLCNKA-204ENST00000464764 NAIF1Q69YI7 327 aaPredicted RBP13.61□□□□□ -0.23
CLCNKA-204ENST00000464764 PTF1AQ7RTS3 328 aa13.61□□□□□ -0.23
CLCNKA-204ENST00000464764 RDH13Q8NBN7 331 aa13.61□□□□□ -0.23
CLCNKA-204ENST00000464764 P3H4Q92791 437 aa13.61□□□□□ -0.23
CLCNKA-204ENST00000464764 BHMT2Q9H2M3 363 aa13.61□□□□□ -0.23
CLCNKA-204ENST00000464764 ECT2Q9H8V3 914 aa13.61□□□□□ -0.23
CLCNKA-204ENST00000464764 A0A1B0GUA9 196 aa13.6□□□□□ -0.23
CLCNKA-204ENST00000464764 VCAM1P19320 739 aa13.6□□□□□ -0.23
CLCNKA-204ENST00000464764 SOX5P35711 763 aa13.6□□□□□ -0.23
CLCNKA-204ENST00000464764 ZNF746Q6NUN9 644 aaPredicted RBP13.6□□□□□ -0.23
CLCNKA-204ENST00000464764 PPP4R3CPQ6ZMV5 832 aa13.6□□□□□ -0.23
CLCNKA-204ENST00000464764 EPM2AIP1Q7L775 607 aaPredicted RBP13.6□□□□□ -0.23
CLCNKA-204ENST00000464764 EXOC3L1Q86VI1 746 aa13.6□□□□□ -0.23
CLCNKA-204ENST00000464764 ANKRD42Q8N9B4 389 aa13.6□□□□□ -0.23
CLCNKA-204ENST00000464764 GDAP1Q8TB36 358 aa13.6□□□□□ -0.23
CLCNKA-204ENST00000464764 SLC20A1Q8WUM9 679 aa13.6□□□□□ -0.23
CLCNKA-204ENST00000464764 CRAMP1Q96RY5 1269 aa13.6□□□□□ -0.23
CLCNKA-204ENST00000464764 EBF2Q9HAK2 575 aa13.6□□□□□ -0.23
CLCNKA-204ENST00000464764 KCNMB3Q9NPA1 279 aa13.6□□□□□ -0.23
CLCNKA-204ENST00000464764 USP40Q9NVE5 1235 aa13.6□□□□□ -0.23
CLCNKA-204ENST00000464764 RGL1Q9NZL6 768 aa13.6□□□□□ -0.23
CLCNKA-204ENST00000464764 CTNNAL1Q9UBT7 734 aa13.6□□□□□ -0.23
CLCNKA-204ENST00000464764 TGFB1I1O43294 461 aa13.6□□□□□ -0.23
CLCNKA-204ENST00000464764 SNX3O60493 162 aa13.6□□□□□ -0.23
CLCNKA-204ENST00000464764 KRT16P08779 473 aa13.6□□□□□ -0.23
CLCNKA-204ENST00000464764 FERP16591 822 aa13.6□□□□□ -0.23
CLCNKA-204ENST00000464764 ZNF543Q08ER8 600 aa13.6□□□□□ -0.23
CLCNKA-204ENST00000464764 ITIH4Q14624 930 aa13.6□□□□□ -0.23
CLCNKA-204ENST00000464764 ZKSCAN8Q15776 578 aaPredicted RBP13.6□□□□□ -0.23
CLCNKA-204ENST00000464764 SHROOM1Q2M3G4 852 aaPredicted RBP13.6□□□□□ -0.23
CLCNKA-204ENST00000464764 SEPT14Q6ZU15 432 aa13.6□□□□□ -0.23
CLCNKA-204ENST00000464764 AMIGO3Q86WK7 504 aa13.6□□□□□ -0.23
CLCNKA-204ENST00000464764 CYP2W1Q8TAV3 490 aa13.6□□□□□ -0.23
CLCNKA-204ENST00000464764 PIGOQ8TEQ8 1089 aa13.6□□□□□ -0.23
CLCNKA-204ENST00000464764 GPR88Q9GZN0 384 aa13.6□□□□□ -0.23
CLCNKA-204ENST00000464764 TTC7AQ9ULT0 858 aaPredicted RBP13.6□□□□□ -0.23
CLCNKA-204ENST00000464764 GOLGA6L10A0A0M3HER8 536 aa13.6□□□□□ -0.23
CLCNKA-204ENST00000464764 PDXKO00764 312 aa13.6□□□□□ -0.23
CLCNKA-204ENST00000464764 RASGRF2O14827 1237 aa13.6□□□□□ -0.23
CLCNKA-204ENST00000464764 ATMINO43313 823 aaPredicted RBP13.6□□□□□ -0.23
CLCNKA-204ENST00000464764 CALUO43852 315 aaPredicted RBP13.6□□□□□ -0.23
CLCNKA-204ENST00000464764 ACSL3O95573 720 aa13.6□□□□□ -0.23
CLCNKA-204ENST00000464764 GH1P01241 217 aa13.6□□□□□ -0.23
CLCNKA-204ENST00000464764 LDHCP07864 332 aa13.6□□□□□ -0.23
CLCNKA-204ENST00000464764 NQO1P15559 274 aaKnown RBP13.6□□□□□ -0.23
CLCNKA-204ENST00000464764 NPEPPSP55786 919 aa13.6□□□□□ -0.23
CLCNKA-204ENST00000464764 ASPRV1Q53RT3 343 aa13.6□□□□□ -0.23
CLCNKA-204ENST00000464764 DYDC1Q8WWB3 177 aa13.6□□□□□ -0.23
CLCNKA-204ENST00000464764 RSRC1Q96IZ7 334 aaKnown RBP13.6□□□□□ -0.23
CLCNKA-204ENST00000464764 BTBD6Q96KE9 485 aa13.6□□□□□ -0.23
CLCNKA-204ENST00000464764 ZNF570Q96NI8 536 aa13.6□□□□□ -0.23
CLCNKA-204ENST00000464764 DNM3Q9UQ16 869 aa13.6□□□□□ -0.23
CLCNKA-204ENST00000464764 C15orf41Q9Y2V0 281 aa13.6□□□□□ -0.23
CLCNKA-204ENST00000464764 GPR75-ASB3A0A0A6YYF3 556 aa13.59□□□□□ -0.23
CLCNKA-204ENST00000464764 RIPK2O43353 540 aa13.59□□□□□ -0.23
CLCNKA-204ENST00000464764 TMEM253P0C7T8 217 aa13.59□□□□□ -0.23
CLCNKA-204ENST00000464764 CCNHP51946 323 aaPredicted RBP13.59□□□□□ -0.23
CLCNKA-204ENST00000464764 ERICH1Q86X53 443 aa13.59□□□□□ -0.23
CLCNKA-204ENST00000464764 TRIM6Q9C030 488 aaPredicted RBP13.59□□□□□ -0.23
CLCNKA-204ENST00000464764 CARD9Q9H257 536 aa13.59□□□□□ -0.23
CLCNKA-204ENST00000464764 ATF5Q9Y2D1 282 aaPredicted RBP13.59□□□□□ -0.23
CLCNKA-204ENST00000464764 AFF2P51816 1311 aa13.59□□□□□ -0.23
CLCNKA-204ENST00000464764 FOXN3O00409 490 aaPredicted RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms