RNA–Protein interactions for RNA: ENST00000464616.6

GARNL3-213, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-213ENST00000464616 SPTY2D1Q68D10 685 aaPredicted RBP4.61□□□□□ -1.67
GARNL3-213ENST00000464616 ZCCHC8Q6NZY4 707 aaKnown RBP4.61□□□□□ -1.67
GARNL3-213ENST00000464616 NOP9Q86U38 636 aaKnown RBP4.61□□□□□ -1.67
GARNL3-213ENST00000464616 RTN4RL1Q86UN2 441 aaPredicted RBP4.61□□□□□ -1.67
GARNL3-213ENST00000464616 DNAJC10Q8IXB1 793 aa4.61□□□□□ -1.67
GARNL3-213ENST00000464616 C7orf31Q8N865 590 aa4.61□□□□□ -1.67
GARNL3-213ENST00000464616 MB21D1Q8N884 522 aa4.61□□□□□ -1.67
GARNL3-213ENST00000464616 KIAA1958Q8N8K9 716 aa4.61□□□□□ -1.67
GARNL3-213ENST00000464616 PRRX2Q99811 253 aa4.61□□□□□ -1.67
GARNL3-213ENST00000464616 NRDE2Q9H7Z3 1164 aa4.61□□□□□ -1.67
GARNL3-213ENST00000464616 IL23AQ9NPF7 189 aa4.61□□□□□ -1.67
GARNL3-213ENST00000464616 DNAI1Q9UI46 699 aa4.61□□□□□ -1.67
GARNL3-213ENST00000464616 ZKSCAN5Q9Y2L8 839 aa4.61□□□□□ -1.67
GARNL3-213ENST00000464616 JUNP05412 331 aaKnown RBP4.6□□□□□ -1.67
GARNL3-213ENST00000464616 FSTL1Q12841 308 aa4.6□□□□□ -1.67
GARNL3-213ENST00000464616 MAN2A1Q16706 1144 aa4.6□□□□□ -1.67
GARNL3-213ENST00000464616 PIK3R6Q5UE93 754 aa4.6□□□□□ -1.67
GARNL3-213ENST00000464616 ABHD17CQ6PCB6 329 aa4.6□□□□□ -1.67
GARNL3-213ENST00000464616 OTOP1Q7RTM1 612 aa4.6□□□□□ -1.67
GARNL3-213ENST00000464616 ATXN2LQ8WWM7 1075 aaKnown RBP4.6□□□□□ -1.67
GARNL3-213ENST00000464616 HAS1Q92839 578 aa4.6□□□□□ -1.67
GARNL3-213ENST00000464616 FOXRED1Q96CU9 486 aaPredicted RBP4.6□□□□□ -1.67
GARNL3-213ENST00000464616 PGBD4Q96DM1 585 aa4.6□□□□□ -1.67
GARNL3-213ENST00000464616 MRFAP1L1Q96HT8 127 aa4.6□□□□□ -1.67
GARNL3-213ENST00000464616 UIMC1Q96RL1 719 aa4.6□□□□□ -1.67
GARNL3-213ENST00000464616 CRAMP1Q96RY5 1269 aa4.6□□□□□ -1.67
GARNL3-213ENST00000464616 TTPALQ9BTX7 342 aa4.6□□□□□ -1.67
GARNL3-213ENST00000464616 C14orf93Q9H972 538 aaKnown RBP4.6□□□□□ -1.67
GARNL3-213ENST00000464616 CEP72Q9P209 647 aa4.6□□□□□ -1.67
GARNL3-213ENST00000464616 TNPO3Q9Y5L0 923 aaKnown RBP4.6□□□□□ -1.67
GARNL3-213ENST00000464616 C2orf78A6NCI8 922 aa4.59□□□□□ -1.67
GARNL3-213ENST00000464616 KCNQ2O43526 872 aa4.59□□□□□ -1.67
GARNL3-213ENST00000464616 FAM20BO75063 409 aa4.59□□□□□ -1.67
GARNL3-213ENST00000464616 GLRX3O76003 335 aaKnown RBP4.59□□□□□ -1.67
GARNL3-213ENST00000464616 TOX4O94842 621 aa4.59□□□□□ -1.67
GARNL3-213ENST00000464616 VSIG10L2P0DP72 767 aa4.59□□□□□ -1.67
GARNL3-213ENST00000464616 ZBTB48P10074 688 aaPredicted RBP4.59□□□□□ -1.67
GARNL3-213ENST00000464616 KCNA6P17658 529 aa4.59□□□□□ -1.67
GARNL3-213ENST00000464616 ADCY2Q08462 1091 aa4.59□□□□□ -1.67
GARNL3-213ENST00000464616 SAFB2Q14151 953 aaKnown RBP eCLIP4.59□□□□□ -1.67
GARNL3-213ENST00000464616 FNDC3BQ53EP0 1204 aaKnown RBP4.59□□□□□ -1.67
GARNL3-213ENST00000464616 Q6ZRM9 215 aa4.59□□□□□ -1.67
GARNL3-213ENST00000464616 BMP8AQ7Z5Y6 402 aa4.59□□□□□ -1.67
GARNL3-213ENST00000464616 PHYKPLQ8IUZ5 450 aa4.59□□□□□ -1.67
GARNL3-213ENST00000464616 PASD1Q8IV76 773 aa4.59□□□□□ -1.67
GARNL3-213ENST00000464616 LARP4BQ92615 738 aaKnown RBP4.59□□□□□ -1.67
GARNL3-213ENST00000464616 TRIM39Q9HCM9 518 aa4.59□□□□□ -1.67
GARNL3-213ENST00000464616 TOMM22Q9NS69 142 aa4.59□□□□□ -1.67
GARNL3-213ENST00000464616 IFT57Q9NWB7 429 aa4.59□□□□□ -1.67
GARNL3-213ENST00000464616 TRAF5O00463 557 aa4.58□□□□□ -1.68
GARNL3-213ENST00000464616 PPFIA4O75335 1185 aa4.58□□□□□ -1.68
GARNL3-213ENST00000464616 RECQL4O94761 1208 aa4.58□□□□□ -1.68
GARNL3-213ENST00000464616 FSBPO95073 299 aa4.58□□□□□ -1.68
GARNL3-213ENST00000464616 JMJD7P0C870 316 aa4.58□□□□□ -1.68
GARNL3-213ENST00000464616 SLC9A1P19634 815 aa4.58□□□□□ -1.68
GARNL3-213ENST00000464616 SCNN1GP51170 649 aa4.58□□□□□ -1.68
GARNL3-213ENST00000464616 ANTXR2P58335 489 aa4.58□□□□□ -1.68
GARNL3-213ENST00000464616 CFAP100Q494V2 611 aa4.58□□□□□ -1.68
GARNL3-213ENST00000464616 FNDC7Q5VTL7 733 aa4.58□□□□□ -1.68
GARNL3-213ENST00000464616 ELOA2Q8IYF1 753 aaPredicted RBP4.58□□□□□ -1.68
GARNL3-213ENST00000464616 ZZZ3Q8IYH5 903 aa4.58□□□□□ -1.68
GARNL3-213ENST00000464616 BCL6BQ8N143 479 aaPredicted RBP4.58□□□□□ -1.68
GARNL3-213ENST00000464616 SLC25A43Q8WUT9 341 aaPredicted RBP4.58□□□□□ -1.68
GARNL3-213ENST00000464616 HIST1H2AHQ96KK5 128 aa4.58□□□□□ -1.68
GARNL3-213ENST00000464616 GPHA2Q96T91 129 aa4.58□□□□□ -1.68
GARNL3-213ENST00000464616 DNAJC2Q99543 621 aaKnown RBP4.58□□□□□ -1.68
GARNL3-213ENST00000464616 HIST1H2AJQ99878 128 aa4.58□□□□□ -1.68
GARNL3-213ENST00000464616 OSBPL2Q9H1P3 480 aa4.58□□□□□ -1.68
GARNL3-213ENST00000464616 HDAC5Q9UQL6 1122 aa4.58□□□□□ -1.68
GARNL3-213ENST00000464616 TMA7Q9Y2S6 64 aaKnown RBP4.58□□□□□ -1.68
GARNL3-213ENST00000464616 ST20-MTHFSA0A0A6YYL1 179 aa4.57□□□□□ -1.68
GARNL3-213ENST00000464616 GAS7O60861 476 aa4.57□□□□□ -1.68
GARNL3-213ENST00000464616 BMS1Q14692 1282 aaKnown RBP4.57□□□□□ -1.68
GARNL3-213ENST00000464616 SART3Q15020 963 aaKnown RBP4.57□□□□□ -1.68
GARNL3-213ENST00000464616 PTPAQ15257 358 aa4.57□□□□□ -1.68
GARNL3-213ENST00000464616 EPHA7Q15375 998 aa4.57□□□□□ -1.68
GARNL3-213ENST00000464616 LAIR1Q6GTX8 287 aa4.57□□□□□ -1.68
GARNL3-213ENST00000464616 CLEC14AQ86T13 490 aa4.57□□□□□ -1.68
GARNL3-213ENST00000464616 CMTM4Q8IZR5 234 aa4.57□□□□□ -1.68
GARNL3-213ENST00000464616 ZNF276Q8N554 614 aa4.57□□□□□ -1.68
GARNL3-213ENST00000464616 ZNF512Q96ME7 567 aaPredicted RBP4.57□□□□□ -1.68
GARNL3-213ENST00000464616 MNTQ99583 582 aa4.57□□□□□ -1.68
GARNL3-213ENST00000464616 NOL10Q9BSC4 688 aaKnown RBP4.57□□□□□ -1.68
GARNL3-213ENST00000464616 XDHP47989 1333 aa4.56□□□□□ -1.68
GARNL3-213ENST00000464616 NRP1O14786 923 aa4.56□□□□□ -1.68
GARNL3-213ENST00000464616 PRPF6O94906 941 aaKnown RBP4.56□□□□□ -1.68
GARNL3-213ENST00000464616 HNRNPLP14866 589 aaKnown RBP eCLIP4.56□□□□□ -1.682e-12■■■■□ 21.9
GARNL3-213ENST00000464616 XPAP23025 273 aaPredicted RBP4.56□□□□□ -1.68
GARNL3-213ENST00000464616 PTX3P26022 381 aaPredicted RBP4.56□□□□□ -1.68
GARNL3-213ENST00000464616 KIR2DL3P43628 341 aa4.56□□□□□ -1.68
GARNL3-213ENST00000464616 NEK4P51957 841 aa4.56□□□□□ -1.68
GARNL3-213ENST00000464616 NANOS3P60323 173 aaKnown RBP4.56□□□□□ -1.68
GARNL3-213ENST00000464616 RABL3Q5HYI8 236 aa4.56□□□□□ -1.68
GARNL3-213ENST00000464616 LDLRAD3Q86YD5 345 aa4.56□□□□□ -1.68
GARNL3-213ENST00000464616 ULK2Q8IYT8 1036 aa4.56□□□□□ -1.68
GARNL3-213ENST00000464616 LILRB2Q8N423 598 aa4.56□□□□□ -1.68
GARNL3-213ENST00000464616 JMYQ8N9B5 988 aa4.56□□□□□ -1.68
GARNL3-213ENST00000464616 OR5M3Q8NGP4 307 aa4.56□□□□□ -1.68
GARNL3-213ENST00000464616 ST8SIA2Q92186 375 aa4.56□□□□□ -1.68
GARNL3-213ENST00000464616 MTG2Q9H4K7 406 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms