RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 ERGIC2Q96RQ1 377 aa9.75□□□□□ -0.85
HPS4-208ENST00000464362 KBTBD4Q9NVX7 518 aa9.75□□□□□ -0.85
HPS4-208ENST00000464362 ADAM22Q9P0K1 906 aa9.75□□□□□ -0.85
HPS4-208ENST00000464362 DCTN4Q9UJW0 460 aa9.75□□□□□ -0.85
HPS4-208ENST00000464362 G3BP2Q9UN86 482 aaKnown RBP9.75□□□□□ -0.85
HPS4-208ENST00000464362 DENND3A2RUS2 1198 aa9.75□□□□□ -0.85
HPS4-208ENST00000464362 RASA4BC9J798 803 aa9.75□□□□□ -0.85
HPS4-208ENST00000464362 RASA4O43374 803 aa9.75□□□□□ -0.85
HPS4-208ENST00000464362 ZRANB2O95218 330 aaKnown RBP eCLIP9.75□□□□□ -0.85
HPS4-208ENST00000464362 BRAFP15056 766 aa9.75□□□□□ -0.85
HPS4-208ENST00000464362 VAMP7P51809 220 aa9.75□□□□□ -0.85
HPS4-208ENST00000464362 NFIAQ12857 509 aa9.75□□□□□ -0.85
HPS4-208ENST00000464362 TBX2Q13207 712 aaPredicted RBP9.75□□□□□ -0.85
HPS4-208ENST00000464362 AP3B2Q13367 1082 aa9.75□□□□□ -0.85
HPS4-208ENST00000464362 PDIA5Q14554 519 aa9.75□□□□□ -0.85
HPS4-208ENST00000464362 HADHQ16836 314 aaKnown RBP9.75□□□□□ -0.85
HPS4-208ENST00000464362 PRR5LQ6MZQ0 368 aa9.75□□□□□ -0.85
HPS4-208ENST00000464362 DNAJC24Q6P3W2 148 aa9.75□□□□□ -0.85
HPS4-208ENST00000464362 RFX6Q8HWS3 928 aa9.75□□□□□ -0.85
HPS4-208ENST00000464362 C7orf31Q8N865 590 aa9.75□□□□□ -0.85
HPS4-208ENST00000464362 C9orf72Q96LT7 481 aa9.75□□□□□ -0.85
HPS4-208ENST00000464362 SLC4A9Q96Q91 983 aa9.75□□□□□ -0.85
HPS4-208ENST00000464362 RMDN3Q96TC7 470 aa9.75□□□□□ -0.85
HPS4-208ENST00000464362 ALG13Q9NP73 1137 aaKnown RBP9.75□□□□□ -0.85
HPS4-208ENST00000464362 ZBTB12Q9Y330 459 aaPredicted RBP9.75□□□□□ -0.85
HPS4-208ENST00000464362 SSU72P8A0A1W2PR75 194 aa9.75□□□□□ -0.85
HPS4-208ENST00000464362 F5H423 210 aaPredicted RBP9.75□□□□□ -0.85
HPS4-208ENST00000464362 INHBAP08476 426 aa9.75□□□□□ -0.85
HPS4-208ENST00000464362 SLC8A1P32418 973 aa9.75□□□□□ -0.85
HPS4-208ENST00000464362 SLMAPQ14BN4 828 aa9.75□□□□□ -0.85
HPS4-208ENST00000464362 RFFLQ8WZ73 363 aa9.75□□□□□ -0.85
HPS4-208ENST00000464362 ATP6V0A1Q93050 837 aa9.75□□□□□ -0.85
HPS4-208ENST00000464362 ELMO3Q96BJ8 720 aa9.75□□□□□ -0.85
HPS4-208ENST00000464362 FAM149B1Q96BN6 582 aa9.75□□□□□ -0.85
HPS4-208ENST00000464362 FAM20AQ96MK3 541 aa9.75□□□□□ -0.85
HPS4-208ENST00000464362 PITPNM3Q9BZ71 974 aa9.75□□□□□ -0.85
HPS4-208ENST00000464362 IL17RBQ9NRM6 502 aa9.75□□□□□ -0.85
HPS4-208ENST00000464362 GINM1Q9NU53 330 aa9.75□□□□□ -0.85
HPS4-208ENST00000464362 CPSF2Q9P2I0 782 aaKnown RBP9.75□□□□□ -0.85
HPS4-208ENST00000464362 ANAPC4Q9UJX5 808 aa9.75□□□□□ -0.85
HPS4-208ENST00000464362 K7ERI5 159 aa9.74□□□□□ -0.85
HPS4-208ENST00000464362 SPAG7O75391 227 aa9.74□□□□□ -0.85
HPS4-208ENST00000464362 SOX5P35711 763 aa9.74□□□□□ -0.85
HPS4-208ENST00000464362 MDH1P40925 334 aaKnown RBP9.74□□□□□ -0.85
HPS4-208ENST00000464362 PRELPP51888 382 aa9.74□□□□□ -0.85
HPS4-208ENST00000464362 MYO1EQ12965 1108 aa9.74□□□□□ -0.85
HPS4-208ENST00000464362 MTMR1Q13613 665 aa9.74□□□□□ -0.85
HPS4-208ENST00000464362 CCDC93Q567U6 631 aa9.74□□□□□ -0.85
HPS4-208ENST00000464362 C6orf118Q5T5N4 469 aa9.74□□□□□ -0.85
HPS4-208ENST00000464362 RNF207Q6ZRF8 634 aa9.74□□□□□ -0.85
HPS4-208ENST00000464362 NKX2-3Q8TAU0 364 aa9.74□□□□□ -0.85
HPS4-208ENST00000464362 HNRNPLLQ8WVV9 542 aaKnown RBP9.74□□□□□ -0.85
HPS4-208ENST00000464362 DNAJC7Q99615 494 aa9.74□□□□□ -0.85
HPS4-208ENST00000464362 ITSN1Q15811 1721 aa9.74□□□□□ -0.85
HPS4-208ENST00000464362 GLI1P08151 1106 aa9.74□□□□□ -0.85
HPS4-208ENST00000464362 EIF3BP55884 814 aaKnown RBP9.74□□□□□ -0.85
HPS4-208ENST00000464362 IFRD2Q12894 506 aaPredicted RBP9.74□□□□□ -0.85
HPS4-208ENST00000464362 ARHGEF18Q6ZSZ5 1173 aa9.74□□□□□ -0.85
HPS4-208ENST00000464362 KIAA0895Q8NCT3 520 aa9.74□□□□□ -0.85
HPS4-208ENST00000464362 ZNF473Q8WTR7 871 aaKnown RBP9.74□□□□□ -0.85
HPS4-208ENST00000464362 CNKSR1Q969H4 720 aa9.74□□□□□ -0.85
HPS4-208ENST00000464362 CCDC97Q96F63 343 aaPredicted RBP9.74□□□□□ -0.85
HPS4-208ENST00000464362 CNOT10Q9H9A5 744 aaKnown RBP9.74□□□□□ -0.85
HPS4-208ENST00000464362 PCSK1NQ9UHG2 260 aa9.74□□□□□ -0.85
HPS4-208ENST00000464362 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.74□□□□□ -0.85
HPS4-208ENST00000464362 A0A0G2JND7 137 aa9.74□□□□□ -0.85
HPS4-208ENST00000464362 PDE2AO00408 941 aaPredicted RBP9.74□□□□□ -0.85
HPS4-208ENST00000464362 MEFVO15553 781 aaPredicted RBP9.74□□□□□ -0.85
HPS4-208ENST00000464362 RASSF2P50749 326 aa9.74□□□□□ -0.85
HPS4-208ENST00000464362 MDM2Q00987 491 aaPredicted RBP9.74□□□□□ -0.85
HPS4-208ENST00000464362 MAP7D1Q3KQU3 841 aa9.74□□□□□ -0.85
HPS4-208ENST00000464362 NLRP4Q96MN2 994 aa9.74□□□□□ -0.85
HPS4-208ENST00000464362 FAM167BQ9BTA0 163 aa9.74□□□□□ -0.85
HPS4-208ENST00000464362 CLDN3O15551 220 aa9.73□□□□□ -0.85
HPS4-208ENST00000464362 CYTH3O43739 400 aa9.73□□□□□ -0.85
HPS4-208ENST00000464362 ADCY2Q08462 1091 aa9.73□□□□□ -0.85
HPS4-208ENST00000464362 LONRF1Q17RB8 773 aa9.73□□□□□ -0.85
HPS4-208ENST00000464362 CEP128Q6ZU80 1094 aa9.73□□□□□ -0.85
HPS4-208ENST00000464362 HAUS6Q7Z4H7 955 aa9.73□□□□□ -0.85
HPS4-208ENST00000464362 CATSPER3Q86XQ3 398 aa9.73□□□□□ -0.85
HPS4-208ENST00000464362 ZBTB8OSQ8IWT0 167 aa9.73□□□□□ -0.85
HPS4-208ENST00000464362 RNF169Q8NCN4 708 aa9.73□□□□□ -0.85
HPS4-208ENST00000464362 HIPK4Q8NE63 616 aa9.73□□□□□ -0.85
HPS4-208ENST00000464362 VIPAS39Q9H9C1 493 aa9.73□□□□□ -0.85
HPS4-208ENST00000464362 RIMS1Q86UR5 1692 aaKnown RBP9.73□□□□□ -0.85
HPS4-208ENST00000464362 SYNGAP1Q96PV0 1343 aa9.73□□□□□ -0.85
HPS4-208ENST00000464362 PALM3A6NDB9 673 aaPredicted RBP9.73□□□□□ -0.85
HPS4-208ENST00000464362 ZNF233A6NK53 670 aa9.73□□□□□ -0.85
HPS4-208ENST00000464362 PHBP35232 272 aa9.73□□□□□ -0.85
HPS4-208ENST00000464362 BPIFB4P59827 614 aa9.73□□□□□ -0.85
HPS4-208ENST00000464362 LGSNQ5TDP6 509 aa9.73□□□□□ -0.85
HPS4-208ENST00000464362 C16orf86Q6ZW13 317 aa9.73□□□□□ -0.85
HPS4-208ENST00000464362 TTC17Q96AE7 1141 aa9.73□□□□□ -0.85
HPS4-208ENST00000464362 DUSP9Q99956 384 aaKnown RBP9.73□□□□□ -0.85
HPS4-208ENST00000464362 FBXO28Q9NVF7 368 aa9.73□□□□□ -0.85
HPS4-208ENST00000464362 HAUS2Q9NVX0 235 aa9.73□□□□□ -0.85
HPS4-208ENST00000464362 GOLGA8RI6L899 631 aa9.73□□□□□ -0.85
HPS4-208ENST00000464362 MED24O75448 989 aa9.73□□□□□ -0.85
HPS4-208ENST00000464362 TNNC2P02585 160 aa9.73□□□□□ -0.85
HPS4-208ENST00000464362 HSPA6P17066 643 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms