RNA–Protein interactions for RNA: ENST00000464082.1

CD46-211, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-211ENST00000464082 ZNF384Q8TF68 577 aa6.6□□□□□ -1.35
CD46-211ENST00000464082 NOC4LQ9BVI4 516 aaKnown RBP6.6□□□□□ -1.35
CD46-211ENST00000464082 C1QTNF3Q9BXJ4 246 aa6.6□□□□□ -1.35
CD46-211ENST00000464082 DEFB129Q9H1M3 183 aa6.6□□□□□ -1.35
CD46-211ENST00000464082 TDRD3Q9H7E2 651 aaKnown RBP6.6□□□□□ -1.35
CD46-211ENST00000464082 CHST7Q9NS84 486 aa6.6□□□□□ -1.35
CD46-211ENST00000464082 ZNF70Q9UC06 446 aaPredicted RBP6.6□□□□□ -1.35
CD46-211ENST00000464082 GTF3C3Q9Y5Q9 886 aa6.6□□□□□ -1.35
CD46-211ENST00000464082 CENPFP49454 3210 aa6.6□□□□□ -1.35
CD46-211ENST00000464082 BAZ2AQ9UIF9 1905 aaKnown RBP6.6□□□□□ -1.35
CD46-211ENST00000464082 SALL1Q9NSC2 1324 aa6.59□□□□□ -1.35
CD46-211ENST00000464082 A0A1B0GUL7 405 aa6.59□□□□□ -1.35
CD46-211ENST00000464082 GNAI2P04899 355 aa6.59□□□□□ -1.35
CD46-211ENST00000464082 IFIT1P09914 478 aaKnown RBP6.59□□□□□ -1.35
CD46-211ENST00000464082 SLC5A1P13866 664 aa6.59□□□□□ -1.35
CD46-211ENST00000464082 PRDX5P30044 214 aa6.59□□□□□ -1.35
CD46-211ENST00000464082 POLR2BP30876 1174 aaKnown RBP6.59□□□□□ -1.35
CD46-211ENST00000464082 TIMM10P62072 90 aa6.59□□□□□ -1.35
CD46-211ENST00000464082 HDLBPQ00341 1268 aaKnown RBP6.59□□□□□ -1.35
CD46-211ENST00000464082 KIF23Q02241 960 aaPredicted RBP6.59□□□□□ -1.35
CD46-211ENST00000464082 LMNB2Q03252 620 aa6.59□□□□□ -1.35
CD46-211ENST00000464082 TFCP2Q12800 502 aa6.59□□□□□ -1.35
CD46-211ENST00000464082 RASGRF1Q13972 1273 aa6.59□□□□□ -1.35
CD46-211ENST00000464082 RASA3Q14644 834 aa6.59□□□□□ -1.35
CD46-211ENST00000464082 CAVIN4Q5BKX8 364 aa6.59□□□□□ -1.35
CD46-211ENST00000464082 Q8N1X5 172 aa6.59□□□□□ -1.35
CD46-211ENST00000464082 FBXO27Q8NI29 283 aa6.59□□□□□ -1.35
CD46-211ENST00000464082 SSH3Q8TE77 659 aa6.59□□□□□ -1.35
CD46-211ENST00000464082 TBC1D22AQ8WUA7 517 aa6.59□□□□□ -1.35
CD46-211ENST00000464082 EAF1Q96JC9 268 aaPredicted RBP6.59□□□□□ -1.35
CD46-211ENST00000464082 ZDHHC15Q96MV8 337 aa6.59□□□□□ -1.35
CD46-211ENST00000464082 MRIQ9BWK5 157 aa6.59□□□□□ -1.35
CD46-211ENST00000464082 KIAA0100Q14667 2235 aaKnown RBP6.58□□□□□ -1.36
CD46-211ENST00000464082 NAV1Q8NEY1 1877 aa6.58□□□□□ -1.36
CD46-211ENST00000464082 DBHP09172 617 aa6.58□□□□□ -1.36
CD46-211ENST00000464082 CACNB3P54284 484 aa6.58□□□□□ -1.36
CD46-211ENST00000464082 GJA9P57773 515 aa6.58□□□□□ -1.36
CD46-211ENST00000464082 ATP8B2P98198 1209 aa6.58□□□□□ -1.36
CD46-211ENST00000464082 PRKG1Q13976 671 aa6.58□□□□□ -1.36
CD46-211ENST00000464082 CEP85Q6P2H3 762 aa6.58□□□□□ -1.36
CD46-211ENST00000464082 PAQR3Q6TCH7 311 aa6.58□□□□□ -1.36
CD46-211ENST00000464082 VPS37DQ86XT2 251 aa6.58□□□□□ -1.36
CD46-211ENST00000464082 ZFPM1Q8IX07 1006 aa6.58□□□□□ -1.36
CD46-211ENST00000464082 LOXL4Q96JB6 756 aa6.58□□□□□ -1.36
CD46-211ENST00000464082 CLMNQ96JQ2 1002 aa6.58□□□□□ -1.36
CD46-211ENST00000464082 DUSP9Q99956 384 aaKnown RBP6.58□□□□□ -1.36
CD46-211ENST00000464082 TMEM39BQ9GZU3 492 aa6.58□□□□□ -1.36
CD46-211ENST00000464082 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.58□□□□□ -1.36
CD46-211ENST00000464082 VEZTQ9HBM0 779 aa6.58□□□□□ -1.36
CD46-211ENST00000464082 SUGT1Q9Y2Z0 365 aa6.58□□□□□ -1.36
CD46-211ENST00000464082 PPP2R3BQ9Y5P8 575 aa6.58□□□□□ -1.36
CD46-211ENST00000464082 RBBP6Q7Z6E9 1792 aaKnown RBP6.58□□□□□ -1.36
CD46-211ENST00000464082 ATRNL1Q5VV63 1379 aa6.57□□□□□ -1.36
CD46-211ENST00000464082 RPAP1Q9BWH6 1393 aaPredicted RBP6.57□□□□□ -1.36
CD46-211ENST00000464082 BRCA2P51587 3418 aa6.57□□□□□ -1.36
CD46-211ENST00000464082 LOC285556D6RIA3 1793 aa6.57□□□□□ -1.36
CD46-211ENST00000464082 GAKO14976 1311 aa6.57□□□□□ -1.36
CD46-211ENST00000464082 PDS5AQ29RF7 1337 aaKnown RBP6.57□□□□□ -1.36
CD46-211ENST00000464082 TCP10L2B9ZVM9 353 aa6.57□□□□□ -1.36
CD46-211ENST00000464082 PRPF40AO75400 957 aaKnown RBP6.57□□□□□ -1.36
CD46-211ENST00000464082 VAV1P15498 845 aa6.57□□□□□ -1.36
CD46-211ENST00000464082 RAG1P15918 1043 aa6.57□□□□□ -1.36
CD46-211ENST00000464082 BMP8BP34820 402 aa6.57□□□□□ -1.36
CD46-211ENST00000464082 MCAMP43121 646 aa6.57□□□□□ -1.36
CD46-211ENST00000464082 PRR5P85299 388 aa6.57□□□□□ -1.36
CD46-211ENST00000464082 TAF1CQ15572 869 aaPredicted RBP6.57□□□□□ -1.36
CD46-211ENST00000464082 WDR66Q8TBY9 1149 aa6.57□□□□□ -1.36
CD46-211ENST00000464082 TEKT1Q969V4 418 aa6.57□□□□□ -1.36
CD46-211ENST00000464082 GFOD1Q9NXC2 390 aa6.57□□□□□ -1.36
CD46-211ENST00000464082 RNF186Q9NXI6 227 aa6.57□□□□□ -1.36
CD46-211ENST00000464082 SAGE1Q9NXZ1 904 aa6.57□□□□□ -1.36
CD46-211ENST00000464082 HDAC5Q9UQL6 1122 aa6.57□□□□□ -1.36
CD46-211ENST00000464082 FAN1Q9Y2M0 1017 aa6.57□□□□□ -1.36
CD46-211ENST00000464082 NOP58Q9Y2X3 529 aaKnown RBP6.57□□□□□ -1.36
CD46-211ENST00000464082 PDE4DIPQ5VU43 2346 aa6.57□□□□□ -1.36
CD46-211ENST00000464082 TNRC18O15417 2968 aaPredicted RBP6.57□□□□□ -1.36
CD46-211ENST00000464082 PARP14Q460N5 1801 aa6.56□□□□□ -1.36
CD46-211ENST00000464082 MYO1BO43795 1136 aa6.56□□□□□ -1.36
CD46-211ENST00000464082 CYBBP04839 570 aa6.56□□□□□ -1.36
CD46-211ENST00000464082 TACR2P21452 398 aa6.56□□□□□ -1.36
CD46-211ENST00000464082 TM4SF4P48230 202 aa6.56□□□□□ -1.36
CD46-211ENST00000464082 RBM5P52756 815 aaKnown RBP eCLIP6.56□□□□□ -1.36
CD46-211ENST00000464082 RTP2Q5QGT7 225 aa6.56□□□□□ -1.36
CD46-211ENST00000464082 C20orf194Q5TEA3 1177 aa6.56□□□□□ -1.36
CD46-211ENST00000464082 FKBP1CQ5VVH2 108 aa6.56□□□□□ -1.36
CD46-211ENST00000464082 CDC42EP5Q6NZY7 148 aa6.56□□□□□ -1.36
CD46-211ENST00000464082 CRTC3Q6UUV7 619 aa6.56□□□□□ -1.36
CD46-211ENST00000464082 SPRED1Q7Z699 444 aa6.56□□□□□ -1.36
CD46-211ENST00000464082 FAM83AQ86UY5 434 aa6.56□□□□□ -1.36
CD46-211ENST00000464082 ITPRIPQ8IWB1 547 aa6.56□□□□□ -1.36
CD46-211ENST00000464082 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.56□□□□□ -1.36
CD46-211ENST00000464082 WNK4Q96J92 1243 aa6.56□□□□□ -1.36
CD46-211ENST00000464082 RHOVQ96L33 236 aa6.56□□□□□ -1.36
CD46-211ENST00000464082 SAMD11Q96NU1 681 aa6.56□□□□□ -1.36
CD46-211ENST00000464082 R3HDMLQ9H3Y0 253 aa6.56□□□□□ -1.36
CD46-211ENST00000464082 HMG20BQ9P0W2 317 aa6.56□□□□□ -1.36
CD46-211ENST00000464082 DENND2AQ9ULE3 1009 aa6.56□□□□□ -1.36
CD46-211ENST00000464082 MAST3O60307 1309 aa6.55□□□□□ -1.36
CD46-211ENST00000464082 A0A1W2PQ27 194 aa6.55□□□□□ -1.36
CD46-211ENST00000464082 A0A1W2PQ64 194 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms