RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 RGL1Q9NZL6 768 aa21.13■□□□□ 0.97
SF3A1-205ENST00000463818 WRAP73Q9P2S5 460 aaPredicted RBP21.13■□□□□ 0.97
SF3A1-205ENST00000463818 PI4K2BG5E9Z4 385 aa21.12■□□□□ 0.97
SF3A1-205ENST00000463818 JAK2O60674 1132 aa21.12■□□□□ 0.97
SF3A1-205ENST00000463818 EOMESO95936 686 aa21.12■□□□□ 0.97
SF3A1-205ENST00000463818 NCAPH2Q6IBW4 605 aa21.12■□□□□ 0.97
SF3A1-205ENST00000463818 ZNF598Q86UK7 904 aaKnown RBP21.12■□□□□ 0.97
SF3A1-205ENST00000463818 ZNF410Q86VK4 478 aa21.12■□□□□ 0.97
SF3A1-205ENST00000463818 SLFN12Q8IYM2 578 aa21.12■□□□□ 0.97
SF3A1-205ENST00000463818 EFHBQ8N7U6 833 aa21.12■□□□□ 0.97
SF3A1-205ENST00000463818 INO80BQ9C086 356 aaPredicted RBP21.12■□□□□ 0.97
SF3A1-205ENST00000463818 TLE6Q9H808 572 aa21.12■□□□□ 0.97
SF3A1-205ENST00000463818 BTBD18B2RXH4 712 aa21.11■□□□□ 0.97
SF3A1-205ENST00000463818 MBTPS2O43462 519 aa21.11■□□□□ 0.97
SF3A1-205ENST00000463818 TBX10O75333 385 aa21.11■□□□□ 0.97
SF3A1-205ENST00000463818 SFPQP23246 707 aaKnown RBP eCLIP21.11■□□□□ 0.97
SF3A1-205ENST00000463818 NDUFV1P49821 464 aa21.11■□□□□ 0.97
SF3A1-205ENST00000463818 ERVFC1P60507 584 aa21.11■□□□□ 0.97
SF3A1-205ENST00000463818 CLLU1OSQ5K130 101 aa21.11■□□□□ 0.97
SF3A1-205ENST00000463818 KCNT2Q6UVM3 1135 aa21.11■□□□□ 0.97
SF3A1-205ENST00000463818 C4orf19Q8IY42 314 aa21.11■□□□□ 0.97
SF3A1-205ENST00000463818 DYDC2Q96IM9 177 aa21.11■□□□□ 0.97
SF3A1-205ENST00000463818 TLR9Q9NR96 1032 aa21.11■□□□□ 0.97
SF3A1-205ENST00000463818 PRKAG3Q9UGI9 489 aa21.11■□□□□ 0.97
SF3A1-205ENST00000463818 RAPGEFL1Q9UHV5 662 aa21.11■□□□□ 0.97
SF3A1-205ENST00000463818 CD207Q9UJ71 328 aa21.11■□□□□ 0.97
SF3A1-205ENST00000463818 PER2O15055 1255 aa21.1■□□□□ 0.97
SF3A1-205ENST00000463818 FOSBP53539 338 aa21.1■□□□□ 0.97
SF3A1-205ENST00000463818 PLCB3Q01970 1234 aa21.1■□□□□ 0.97
SF3A1-205ENST00000463818 SPIRE1Q08AE8 756 aa21.1■□□□□ 0.97
SF3A1-205ENST00000463818 CTTNQ14247 550 aaKnown RBP21.1■□□□□ 0.97
SF3A1-205ENST00000463818 SMAD2Q15796 467 aaKnown RBP21.1■□□□□ 0.97
SF3A1-205ENST00000463818 OTUD6AQ7L8S5 288 aa21.1■□□□□ 0.97
SF3A1-205ENST00000463818 EXOC8Q8IYI6 725 aa21.1■□□□□ 0.97
SF3A1-205ENST00000463818 LRRC43Q8N309 656 aa21.1■□□□□ 0.97
SF3A1-205ENST00000463818 HELQQ8TDG4 1101 aa21.1■□□□□ 0.97
SF3A1-205ENST00000463818 SLC7A3Q8WY07 619 aa21.1■□□□□ 0.97
SF3A1-205ENST00000463818 NLRP4Q96MN2 994 aa21.1■□□□□ 0.97
SF3A1-205ENST00000463818 LXNQ9BS40 222 aa21.1■□□□□ 0.97
SF3A1-205ENST00000463818 LRFN3Q9BTN0 628 aa21.1■□□□□ 0.97
SF3A1-205ENST00000463818 DHX33Q9H6R0 707 aaKnown RBP21.1■□□□□ 0.97
SF3A1-205ENST00000463818 ZSWIM4Q9H7M6 989 aa21.1■□□□□ 0.97
SF3A1-205ENST00000463818 CLEC1BQ9P126 229 aa21.1■□□□□ 0.97
SF3A1-205ENST00000463818 PUF60Q9UHX1 559 aaKnown RBP21.1■□□□□ 0.97
SF3A1-205ENST00000463818 PPME1Q9Y570 386 aa21.1■□□□□ 0.97
SF3A1-205ENST00000463818 ZBTB39O15060 712 aa21.09■□□□□ 0.97
SF3A1-205ENST00000463818 SLITRK3O94933 977 aa21.09■□□□□ 0.97
SF3A1-205ENST00000463818 ATF7P17544 494 aaPredicted RBP21.09■□□□□ 0.97
SF3A1-205ENST00000463818 YWHABP31946 246 aaKnown RBP21.09■□□□□ 0.97
SF3A1-205ENST00000463818 PHKA2P46019 1235 aa21.09■□□□□ 0.97
SF3A1-205ENST00000463818 POLGP54098 1239 aaPredicted RBP21.09■□□□□ 0.97
SF3A1-205ENST00000463818 ZP2Q05996 745 aa21.09■□□□□ 0.97
SF3A1-205ENST00000463818 TRIM29Q14134 588 aa21.09■□□□□ 0.97
SF3A1-205ENST00000463818 TMEM31Q5JXX7 168 aa21.09■□□□□ 0.97
SF3A1-205ENST00000463818 PDE12Q6L8Q7 609 aaKnown RBP21.09■□□□□ 0.97
SF3A1-205ENST00000463818 CATSPER4Q7RTX7 472 aa21.09■□□□□ 0.97
SF3A1-205ENST00000463818 TPH2Q8IWU9 490 aa21.09■□□□□ 0.97
SF3A1-205ENST00000463818 ADHFE1Q8IWW8 467 aa21.09■□□□□ 0.97
SF3A1-205ENST00000463818 DIS3L2Q8IYB7 885 aaKnown RBP21.09■□□□□ 0.97
SF3A1-205ENST00000463818 PRPF31Q8WWY3 499 aaKnown RBP21.09■□□□□ 0.97
SF3A1-205ENST00000463818 MRPS27Q92552 414 aaKnown RBP21.09■□□□□ 0.97
SF3A1-205ENST00000463818 TMEM143Q96AN5 459 aa21.09■□□□□ 0.97
SF3A1-205ENST00000463818 MSLNLQ96KJ4 702 aa21.09■□□□□ 0.97
SF3A1-205ENST00000463818 ZNF558Q96NG5 402 aa21.09■□□□□ 0.97
SF3A1-205ENST00000463818 IFT122Q9HBG6 1241 aa21.09■□□□□ 0.97
SF3A1-205ENST00000463818 LZTS1Q9Y250 596 aa21.09■□□□□ 0.97
SF3A1-205ENST00000463818 COL4A3BPQ9Y5P4 624 aa21.09■□□□□ 0.97
SF3A1-205ENST00000463818 C19orf67A6NJJ6 358 aa21.08■□□□□ 0.97
SF3A1-205ENST00000463818 FSCN2O14926 492 aa21.08■□□□□ 0.97
SF3A1-205ENST00000463818 SRGAP2CP0DJJ0 459 aa21.08■□□□□ 0.97
SF3A1-205ENST00000463818 PBX3P40426 434 aa21.08■□□□□ 0.97
SF3A1-205ENST00000463818 RFC5P40937 340 aa21.08■□□□□ 0.97
SF3A1-205ENST00000463818 CYP4A11Q02928 519 aa21.08■□□□□ 0.97
SF3A1-205ENST00000463818 ST3GAL1Q11201 340 aa21.08■□□□□ 0.97
SF3A1-205ENST00000463818 SMAD4Q13485 552 aaKnown RBP21.08■□□□□ 0.97
SF3A1-205ENST00000463818 CALCRLQ16602 461 aa21.08■□□□□ 0.97
SF3A1-205ENST00000463818 XKR9Q5GH70 373 aa21.08■□□□□ 0.97
SF3A1-205ENST00000463818 TWF2Q6IBS0 349 aaKnown RBP21.08■□□□□ 0.97
SF3A1-205ENST00000463818 TRAIPQ9BWF2 469 aa21.08■□□□□ 0.97
SF3A1-205ENST00000463818 BMP2KQ9NSY1 1161 aaPredicted RBP21.08■□□□□ 0.97
SF3A1-205ENST00000463818 SPG21Q9NZD8 308 aa21.08■□□□□ 0.97
SF3A1-205ENST00000463818 PCDHA12Q9UN75 941 aa21.08■□□□□ 0.97
SF3A1-205ENST00000463818 PIN4Q9Y237 131 aaKnown RBP21.08■□□□□ 0.97
SF3A1-205ENST00000463818 GPR37L1O60883 481 aa21.07■□□□□ 0.96
SF3A1-205ENST00000463818 EYA4O95677 639 aa21.07■□□□□ 0.96
SF3A1-205ENST00000463818 SKIP12755 728 aa21.07■□□□□ 0.96
SF3A1-205ENST00000463818 KRT17Q04695 432 aa21.07■□□□□ 0.96
SF3A1-205ENST00000463818 LAMTOR4Q0VGL1 99 aa21.07■□□□□ 0.96
SF3A1-205ENST00000463818 LONRF3Q496Y0 759 aa21.07■□□□□ 0.96
SF3A1-205ENST00000463818 PSPC1Q8WXF1 523 aaKnown RBP21.07■□□□□ 0.96
SF3A1-205ENST00000463818 LPPQ93052 612 aa21.07■□□□□ 0.96
SF3A1-205ENST00000463818 EIF2AK1Q9BQI3 630 aaKnown RBP21.07■□□□□ 0.96
SF3A1-205ENST00000463818 LIMCH1Q9UPQ0 1083 aa21.07■□□□□ 0.96
SF3A1-205ENST00000463818 WDR81Q562E7 1941 aa21.06■□□□□ 0.96
SF3A1-205ENST00000463818 WNT7AO00755 349 aa21.06■□□□□ 0.96
SF3A1-205ENST00000463818 GLP2RO95838 553 aa21.06■□□□□ 0.96
SF3A1-205ENST00000463818 PPM1AP35813 382 aa21.06■□□□□ 0.96
SF3A1-205ENST00000463818 COASYQ13057 564 aa21.06■□□□□ 0.96
SF3A1-205ENST00000463818 DUSP6Q16828 381 aa21.06■□□□□ 0.96
SF3A1-205ENST00000463818 PLPP4Q5VZY2 271 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms