RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 GCP02774 474 aa3.9□□□□□ -1.79
COL8A1-205ENST00000463753 ASLP04424 464 aa3.9□□□□□ -1.79
COL8A1-205ENST00000463753 GNAI2P04899 355 aa3.9□□□□□ -1.79
COL8A1-205ENST00000463753 GSTA2P09210 222 aa3.9□□□□□ -1.79
COL8A1-205ENST00000463753 MYZAPP0CAP1 466 aa3.9□□□□□ -1.79
COL8A1-205ENST00000463753 ALADP13716 330 aa3.9□□□□□ -1.79
COL8A1-205ENST00000463753 IDEP14735 1019 aa3.9□□□□□ -1.79
COL8A1-205ENST00000463753 ZKSCAN1P17029 563 aaPredicted RBP3.9□□□□□ -1.79
COL8A1-205ENST00000463753 CASP14P31944 242 aa3.9□□□□□ -1.79
COL8A1-205ENST00000463753 VPS41P49754 854 aa3.9□□□□□ -1.79
COL8A1-205ENST00000463753 TMED10P49755 219 aaKnown RBP3.9□□□□□ -1.79
COL8A1-205ENST00000463753 PEX5P50542 639 aa3.9□□□□□ -1.79
COL8A1-205ENST00000463753 DNA2P51530 1060 aa3.9□□□□□ -1.79
COL8A1-205ENST00000463753 HPCAP84074 193 aa3.9□□□□□ -1.79
COL8A1-205ENST00000463753 CYP4A11Q02928 519 aa3.9□□□□□ -1.79
COL8A1-205ENST00000463753 TBX2Q13207 712 aaPredicted RBP3.9□□□□□ -1.79
COL8A1-205ENST00000463753 SLC39A6Q13433 755 aa3.9□□□□□ -1.79
COL8A1-205ENST00000463753 PNOCQ13519 176 aa3.9□□□□□ -1.79
COL8A1-205ENST00000463753 PDE1CQ14123 709 aaPredicted RBP3.9□□□□□ -1.79
COL8A1-205ENST00000463753 STK38Q15208 465 aa3.9□□□□□ -1.79
COL8A1-205ENST00000463753 CCDC6Q16204 474 aa3.9□□□□□ -1.79
COL8A1-205ENST00000463753 KCTD19Q17RG1 926 aaPredicted RBP3.9□□□□□ -1.79
COL8A1-205ENST00000463753 CCDC122Q5T0U0 273 aa3.9□□□□□ -1.79
COL8A1-205ENST00000463753 PPP4R3AQ6IN85 833 aa3.9□□□□□ -1.79
COL8A1-205ENST00000463753 IQCEQ6IPM2 695 aa3.9□□□□□ -1.79
COL8A1-205ENST00000463753 KLHL10Q6JEL2 608 aa3.9□□□□□ -1.79
COL8A1-205ENST00000463753 CCDC129Q6ZRS4 1044 aa3.9□□□□□ -1.79
COL8A1-205ENST00000463753 TRPM8Q7Z2W7 1104 aa3.9□□□□□ -1.79
COL8A1-205ENST00000463753 TRAPPC11Q7Z392 1133 aa3.9□□□□□ -1.79
COL8A1-205ENST00000463753 DCLK2Q8N568 766 aa3.9□□□□□ -1.79
COL8A1-205ENST00000463753 NSUN7Q8NE18 718 aaKnown RBP3.9□□□□□ -1.79
COL8A1-205ENST00000463753 NELFBQ8WX92 580 aa3.9□□□□□ -1.79
COL8A1-205ENST00000463753 P3H4Q92791 437 aa3.9□□□□□ -1.79
COL8A1-205ENST00000463753 HPS1Q92902 700 aa3.9□□□□□ -1.79
COL8A1-205ENST00000463753 CCDC85AQ96PX6 553 aaPredicted RBP3.9□□□□□ -1.79
COL8A1-205ENST00000463753 NEK1Q96PY6 1258 aa3.9□□□□□ -1.79
COL8A1-205ENST00000463753 XPO6Q96QU8 1125 aaKnown RBP3.9□□□□□ -1.79
COL8A1-205ENST00000463753 CTAGE1Q96RT6 745 aa3.9□□□□□ -1.79
COL8A1-205ENST00000463753 SPATA16Q9BXB7 569 aa3.9□□□□□ -1.79
COL8A1-205ENST00000463753 MIS12Q9H081 205 aa3.9□□□□□ -1.79
COL8A1-205ENST00000463753 LSG1Q9H089 658 aaKnown RBP3.9□□□□□ -1.79
COL8A1-205ENST00000463753 DDX18Q9NVP1 670 aaKnown RBP3.9□□□□□ -1.79
COL8A1-205ENST00000463753 SAMD15Q9P1V8 674 aa3.9□□□□□ -1.79
COL8A1-205ENST00000463753 PCDHA7Q9UN72 937 aa3.9□□□□□ -1.79
COL8A1-205ENST00000463753 LUC7L2Q9Y383 392 aaKnown RBP3.9□□□□□ -1.79
COL8A1-205ENST00000463753 MACROD2A1Z1Q3 448 aa3.89□□□□□ -1.79
COL8A1-205ENST00000463753 ZSCAN5CA6NGD5 496 aaPredicted RBP3.89□□□□□ -1.79
COL8A1-205ENST00000463753 GOLGA8AA7E2F4 631 aa3.89□□□□□ -1.79
COL8A1-205ENST00000463753 PROB1E7EW31 1015 aa3.89□□□□□ -1.79
COL8A1-205ENST00000463753 TEX33O43247 280 aa3.89□□□□□ -1.79
COL8A1-205ENST00000463753 VAMP4O75379 141 aa3.89□□□□□ -1.79
COL8A1-205ENST00000463753 PDE5AO76074 875 aa3.89□□□□□ -1.79
COL8A1-205ENST00000463753 LCA5LO95447 670 aa3.89□□□□□ -1.79
COL8A1-205ENST00000463753 SHBGP04278 402 aa3.89□□□□□ -1.79
COL8A1-205ENST00000463753 CYP1A1P04798 512 aaPredicted RBP3.89□□□□□ -1.79
COL8A1-205ENST00000463753 CXCR5P32302 372 aa3.89□□□□□ -1.79
COL8A1-205ENST00000463753 PPP1R2P41236 205 aa3.89□□□□□ -1.79
COL8A1-205ENST00000463753 VAV2P52735 878 aa3.89□□□□□ -1.79
COL8A1-205ENST00000463753 GEMIN4P57678 1058 aaKnown RBP3.89□□□□□ -1.79
COL8A1-205ENST00000463753 NCALDP61601 193 aa3.89□□□□□ -1.79
COL8A1-205ENST00000463753 PTH1RQ03431 593 aa3.89□□□□□ -1.79
COL8A1-205ENST00000463753 AGERQ15109 404 aa3.89□□□□□ -1.79
COL8A1-205ENST00000463753 SHROOM1Q2M3G4 852 aaPredicted RBP3.89□□□□□ -1.79
COL8A1-205ENST00000463753 SYDE2Q5VT97 1194 aa3.89□□□□□ -1.79
COL8A1-205ENST00000463753 PPP1R2P3Q6NXS1 205 aa3.89□□□□□ -1.79
COL8A1-205ENST00000463753 RASGRP2Q7LDG7 609 aa3.89□□□□□ -1.79
COL8A1-205ENST00000463753 SPATA24Q86W54 205 aa3.89□□□□□ -1.79
COL8A1-205ENST00000463753 RIBC1Q8N443 379 aaPredicted RBP3.89□□□□□ -1.79
COL8A1-205ENST00000463753 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.89□□□□□ -1.79
COL8A1-205ENST00000463753 RSPH1Q8WYR4 309 aa3.89□□□□□ -1.79
COL8A1-205ENST00000463753 USP6NLQ92738 828 aa3.89□□□□□ -1.79
COL8A1-205ENST00000463753 HSPBAP1Q96EW2 488 aa3.89□□□□□ -1.79
COL8A1-205ENST00000463753 CHMP6Q96FZ7 201 aa3.89□□□□□ -1.79
COL8A1-205ENST00000463753 CATSPER2Q96P56 530 aa3.89□□□□□ -1.79
COL8A1-205ENST00000463753 SELENOSQ9BQE4 189 aa3.89□□□□□ -1.79
COL8A1-205ENST00000463753 EIF2AQ9BY44 585 aaKnown RBP3.89□□□□□ -1.79
COL8A1-205ENST00000463753 CEP44Q9C0F1 390 aa3.89□□□□□ -1.79
COL8A1-205ENST00000463753 EHD2Q9NZN4 543 aa3.89□□□□□ -1.79
COL8A1-205ENST00000463753 HSFX1Q9UBD0 423 aa3.89□□□□□ -1.79
COL8A1-205ENST00000463753 DKK3Q9UBP4 350 aa3.89□□□□□ -1.79
COL8A1-205ENST00000463753 SEC63Q9UGP8 760 aaKnown RBP3.89□□□□□ -1.79
COL8A1-205ENST00000463753 CIDEBQ9UHD4 219 aa3.89□□□□□ -1.79
COL8A1-205ENST00000463753 NOVA2Q9UNW9 492 aaKnown RBP3.89□□□□□ -1.79
COL8A1-205ENST00000463753 DOLKQ9UPQ8 538 aa3.89□□□□□ -1.79
COL8A1-205ENST00000463753 DIS3Q9Y2L1 958 aaKnown RBP3.89□□□□□ -1.79
COL8A1-205ENST00000463753 NFE2L3Q9Y4A8 694 aa3.89□□□□□ -1.79
COL8A1-205ENST00000463753 ALPK3Q96L96 1907 aa3.89□□□□□ -1.79
COL8A1-205ENST00000463753 ERVH48-1M5A8F1 160 aa3.89□□□□□ -1.79
COL8A1-205ENST00000463753 MYCP01106 439 aaPredicted RBP3.89□□□□□ -1.79
COL8A1-205ENST00000463753 GSTA1P08263 222 aa3.89□□□□□ -1.79
COL8A1-205ENST00000463753 RARAP10276 462 aa3.89□□□□□ -1.79
COL8A1-205ENST00000463753 DRD4P21917 467 aa3.89□□□□□ -1.79
COL8A1-205ENST00000463753 RXRGP48443 463 aa3.89□□□□□ -1.79
COL8A1-205ENST00000463753 IFNAR2P48551 515 aa3.89□□□□□ -1.79
COL8A1-205ENST00000463753 PTDSS1P48651 473 aaKnown RBP3.89□□□□□ -1.79
COL8A1-205ENST00000463753 CARSP49589 748 aaKnown RBP3.89□□□□□ -1.79
COL8A1-205ENST00000463753 KIF5AQ12840 1032 aa3.89□□□□□ -1.79
COL8A1-205ENST00000463753 LSAMPQ13449 338 aa3.89□□□□□ -1.79
COL8A1-205ENST00000463753 CYTH1Q15438 398 aa3.89□□□□□ -1.79
COL8A1-205ENST00000463753 TWISTNBQ3B726 338 aaPredicted RBP3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms