RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 ZCWPW2Q504Y3 356 aa10.89□□□□□ -0.67
PTPRD-207ENST00000463477 TMCO3Q6UWJ1 677 aa10.89□□□□□ -0.67
PTPRD-207ENST00000463477 CXCL17Q6UXB2 119 aa10.89□□□□□ -0.67
PTPRD-207ENST00000463477 LRRC55Q6ZSA7 311 aa10.89□□□□□ -0.67
PTPRD-207ENST00000463477 ANKRD33Q7Z3H0 272 aa10.89□□□□□ -0.67
PTPRD-207ENST00000463477 C7orf61Q8IZ16 206 aa10.89□□□□□ -0.67
PTPRD-207ENST00000463477 SLC35F6Q8N357 371 aa10.89□□□□□ -0.67
PTPRD-207ENST00000463477 SLC43A3Q8NBI5 491 aa10.89□□□□□ -0.67
PTPRD-207ENST00000463477 DDX12PQ92771 950 aa10.89□□□□□ -0.67
PTPRD-207ENST00000463477 VTI1AQ96AJ9 217 aa10.89□□□□□ -0.67
PTPRD-207ENST00000463477 CHP1Q99653 195 aa10.89□□□□□ -0.67
PTPRD-207ENST00000463477 TSG101Q99816 390 aa10.89□□□□□ -0.67
PTPRD-207ENST00000463477 EHMT1Q9H9B1 1298 aa10.89□□□□□ -0.67
PTPRD-207ENST00000463477 BMP2KQ9NSY1 1161 aaPredicted RBP10.89□□□□□ -0.67
PTPRD-207ENST00000463477 REXO2Q9Y3B8 237 aaKnown RBP10.89□□□□□ -0.67
PTPRD-207ENST00000463477 LRRC37A2A6NM11 1700 aa10.89□□□□□ -0.67
PTPRD-207ENST00000463477 FRMD3A2A2Y4 597 aa10.89□□□□□ -0.67
PTPRD-207ENST00000463477 ARVCFO00192 962 aa10.89□□□□□ -0.67
PTPRD-207ENST00000463477 KCNA4P22459 653 aa10.89□□□□□ -0.67
PTPRD-207ENST00000463477 CIITAP33076 1130 aa10.89□□□□□ -0.67
PTPRD-207ENST00000463477 MARSP56192 900 aaKnown RBP10.89□□□□□ -0.67
PTPRD-207ENST00000463477 PURAQ00577 322 aaKnown RBP10.89□□□□□ -0.67
PTPRD-207ENST00000463477 SP2Q02086 613 aa10.89□□□□□ -0.67
PTPRD-207ENST00000463477 ARHGAP1Q07960 439 aa10.89□□□□□ -0.67
PTPRD-207ENST00000463477 CELF3Q5SZQ8 465 aaKnown RBP10.89□□□□□ -0.67
PTPRD-207ENST00000463477 KCNK18Q7Z418 384 aa10.89□□□□□ -0.67
PTPRD-207ENST00000463477 CREBRFQ8IUR6 639 aa10.89□□□□□ -0.67
PTPRD-207ENST00000463477 ZC3H3Q8IXZ2 948 aaKnown RBP10.89□□□□□ -0.67
PTPRD-207ENST00000463477 DHX37Q8IY37 1157 aaKnown RBP10.89□□□□□ -0.67
PTPRD-207ENST00000463477 ZFP91Q96JP5 570 aaPredicted RBP10.89□□□□□ -0.67
PTPRD-207ENST00000463477 CEP63Q96MT8 703 aa10.89□□□□□ -0.67
PTPRD-207ENST00000463477 SENP7Q9BQF6 1050 aa10.89□□□□□ -0.67
PTPRD-207ENST00000463477 IRX2Q9BZI1 471 aaPredicted RBP10.89□□□□□ -0.67
PTPRD-207ENST00000463477 SLC39A2Q9NP94 309 aa10.89□□□□□ -0.67
PTPRD-207ENST00000463477 SIK3Q9Y2K2 1263 aa10.89□□□□□ -0.67
PTPRD-207ENST00000463477 MYH10P35580 1976 aa10.88□□□□□ -0.67
PTPRD-207ENST00000463477 A0A0U1RQG5 324 aaPredicted RBP10.88□□□□□ -0.67
PTPRD-207ENST00000463477 CCDC151A5D8V7 595 aa10.88□□□□□ -0.67
PTPRD-207ENST00000463477 SPDYE4A6NLX3 237 aa10.88□□□□□ -0.67
PTPRD-207ENST00000463477 PPFIA4O75335 1185 aa10.88□□□□□ -0.67
PTPRD-207ENST00000463477 LCA5LO95447 670 aa10.88□□□□□ -0.67
PTPRD-207ENST00000463477 GNA14O95837 355 aa10.88□□□□□ -0.67
PTPRD-207ENST00000463477 ZSCAN20P17040 1043 aaPredicted RBP10.88□□□□□ -0.67
PTPRD-207ENST00000463477 SREBF1P36956 1147 aa10.88□□□□□ -0.67
PTPRD-207ENST00000463477 CHMP4BP1P59074 171 aa10.88□□□□□ -0.67
PTPRD-207ENST00000463477 AMPD2Q01433 879 aa10.88□□□□□ -0.67
PTPRD-207ENST00000463477 TLE2Q04725 743 aa10.88□□□□□ -0.67
PTPRD-207ENST00000463477 COASYQ13057 564 aa10.88□□□□□ -0.67
PTPRD-207ENST00000463477 NEDD9Q14511 834 aa10.88□□□□□ -0.67
PTPRD-207ENST00000463477 BRD3Q15059 726 aa10.88□□□□□ -0.67
PTPRD-207ENST00000463477 TRIM60Q495X7 471 aa10.88□□□□□ -0.67
PTPRD-207ENST00000463477 HAUS3Q68CZ6 603 aa10.88□□□□□ -0.67
PTPRD-207ENST00000463477 NLRX1Q86UT6 975 aa10.88□□□□□ -0.67
PTPRD-207ENST00000463477 CCDC65Q8IXS2 484 aa10.88□□□□□ -0.67
PTPRD-207ENST00000463477 MYOCDQ8IZQ8 938 aa10.88□□□□□ -0.67
PTPRD-207ENST00000463477 MSANTD4Q8NCY6 345 aa10.88□□□□□ -0.67
PTPRD-207ENST00000463477 PPTC7Q8NI37 304 aa10.88□□□□□ -0.67
PTPRD-207ENST00000463477 AFG1LQ8WV93 481 aa10.88□□□□□ -0.67
PTPRD-207ENST00000463477 GPRASP2Q96D09 838 aa10.88□□□□□ -0.67
PTPRD-207ENST00000463477 CDHR1Q96JP9 859 aa10.88□□□□□ -0.67
PTPRD-207ENST00000463477 FAM20AQ96MK3 541 aa10.88□□□□□ -0.67
PTPRD-207ENST00000463477 NDST4Q9H3R1 872 aa10.88□□□□□ -0.67
PTPRD-207ENST00000463477 PLAGL2Q9UPG8 496 aa10.88□□□□□ -0.67
PTPRD-207ENST00000463477 ATP11BQ9Y2G3 1177 aa10.88□□□□□ -0.67
PTPRD-207ENST00000463477 UBIAD1Q9Y5Z9 338 aa10.88□□□□□ -0.67
PTPRD-207ENST00000463477 FHOD1Q9Y613 1164 aa10.88□□□□□ -0.67
PTPRD-207ENST00000463477 A0A0U1RQJ8 604 aa10.87□□□□□ -0.67
PTPRD-207ENST00000463477 DCDC2CA8MYV0 355 aa10.87□□□□□ -0.67
PTPRD-207ENST00000463477 PES1O00541 588 aaKnown RBP10.87□□□□□ -0.67
PTPRD-207ENST00000463477 GRIN2DO15399 1336 aa10.87□□□□□ -0.67
PTPRD-207ENST00000463477 KRT86O43790 486 aa10.87□□□□□ -0.67
PTPRD-207ENST00000463477 MARCH6O60337 910 aa10.87□□□□□ -0.67
PTPRD-207ENST00000463477 MMP3P08254 477 aa10.87□□□□□ -0.67
PTPRD-207ENST00000463477 CYP3A4P08684 503 aa10.87□□□□□ -0.67
PTPRD-207ENST00000463477 ITGB5P18084 799 aa10.87□□□□□ -0.67
PTPRD-207ENST00000463477 ARHGAP4P98171 946 aa10.87□□□□□ -0.67
PTPRD-207ENST00000463477 FKBP3Q00688 224 aaKnown RBP10.87□□□□□ -0.67
PTPRD-207ENST00000463477 SPIRE1Q08AE8 756 aa10.87□□□□□ -0.67
PTPRD-207ENST00000463477 ITGA7Q13683 1181 aa10.87□□□□□ -0.67
PTPRD-207ENST00000463477 ECM1Q16610 540 aa10.87□□□□□ -0.67
PTPRD-207ENST00000463477 DGKDQ16760 1214 aa10.87□□□□□ -0.67
PTPRD-207ENST00000463477 FAM26FQ5R3K3 315 aa10.87□□□□□ -0.67
PTPRD-207ENST00000463477 KIAA1217Q5T5P2 1943 aa10.87□□□□□ -0.67
PTPRD-207ENST00000463477 MROH7Q68CQ1 1323 aa10.87□□□□□ -0.67
PTPRD-207ENST00000463477 DYMQ7RTS9 669 aa10.87□□□□□ -0.67
PTPRD-207ENST00000463477 ETNPPLQ8TBG4 499 aa10.87□□□□□ -0.67
PTPRD-207ENST00000463477 HNRNPLLQ8WVV9 542 aaKnown RBP10.87□□□□□ -0.67
PTPRD-207ENST00000463477 ATRIPQ8WXE1 791 aa10.87□□□□□ -0.67
PTPRD-207ENST00000463477 ARID3AQ99856 593 aa10.87□□□□□ -0.67
PTPRD-207ENST00000463477 MTG1Q9BT17 334 aaPredicted RBP10.87□□□□□ -0.67
PTPRD-207ENST00000463477 TSGA10Q9BZW7 698 aa10.87□□□□□ -0.67
PTPRD-207ENST00000463477 MLXIPQ9HAP2 919 aa10.87□□□□□ -0.67
PTPRD-207ENST00000463477 JADE2Q9NQC1 790 aa10.87□□□□□ -0.67
PTPRD-207ENST00000463477 RAB21Q9UL25 225 aa10.87□□□□□ -0.67
PTPRD-207ENST00000463477 PCDHA2Q9Y5H9 948 aa10.87□□□□□ -0.67
PTPRD-207ENST00000463477 RANBP2P49792 3224 aaKnown RBP10.87□□□□□ -0.67
PTPRD-207ENST00000463477 ALPK3Q96L96 1907 aa10.86□□□□□ -0.67
PTPRD-207ENST00000463477 ANO9A1A5B4 782 aa10.86□□□□□ -0.67
PTPRD-207ENST00000463477 IPO7O95373 1038 aaKnown RBP10.86□□□□□ -0.67
PTPRD-207ENST00000463477 GGPS1O95749 300 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms