RNA–Protein interactions for RNA: ENST00000463369.5

SHQ1-203, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2 BASIC

Gene SHQ1, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-203ENST00000463369 PLAAQ9Y263 795 aa9.45□□□□□ -0.9
SHQ1-203ENST00000463369 PPP2R3BQ9Y5P8 575 aa9.45□□□□□ -0.9
SHQ1-203ENST00000463369 TACC3Q9Y6A5 838 aa9.45□□□□□ -0.9
SHQ1-203ENST00000463369 CAPN6Q9Y6Q1 641 aa9.45□□□□□ -0.9
SHQ1-203ENST00000463369 GREB1LQ9C091 1923 aaPredicted RBP9.45□□□□□ -0.9
SHQ1-203ENST00000463369 COL2A1P02458 1487 aaPredicted RBP9.45□□□□□ -0.9
SHQ1-203ENST00000463369 ROBO3Q96MS0 1386 aa9.45□□□□□ -0.9
SHQ1-203ENST00000463369 MYH6P13533 1939 aa9.45□□□□□ -0.9
SHQ1-203ENST00000463369 GOLGA6L10A6NI86 522 aa9.44□□□□□ -0.9
SHQ1-203ENST00000463369 SMIM22K7EJ46 135 aa9.44□□□□□ -0.9
SHQ1-203ENST00000463369 ZNF263O14978 683 aa9.44□□□□□ -0.9
SHQ1-203ENST00000463369 ENTPD3O75355 529 aa9.44□□□□□ -0.9
SHQ1-203ENST00000463369 EGFRP00533 1210 aa9.44□□□□□ -0.9
SHQ1-203ENST00000463369 MYL3P08590 195 aa9.44□□□□□ -0.9
SHQ1-203ENST00000463369 PAEPP09466 180 aa9.44□□□□□ -0.9
SHQ1-203ENST00000463369 CYP2D6P10635 497 aa9.44□□□□□ -0.9
SHQ1-203ENST00000463369 IFNAR1P17181 557 aa9.44□□□□□ -0.9
SHQ1-203ENST00000463369 CXCR5P32302 372 aa9.44□□□□□ -0.9
SHQ1-203ENST00000463369 GUCY2FP51841 1108 aa9.44□□□□□ -0.9
SHQ1-203ENST00000463369 CACNB3P54284 484 aa9.44□□□□□ -0.9
SHQ1-203ENST00000463369 GUCY2DQ02846 1103 aa9.44□□□□□ -0.9
SHQ1-203ENST00000463369 NR5A1Q13285 461 aa9.44□□□□□ -0.9
SHQ1-203ENST00000463369 RASA3Q14644 834 aa9.44□□□□□ -0.9
SHQ1-203ENST00000463369 PPP1R7Q15435 360 aa9.44□□□□□ -0.9
SHQ1-203ENST00000463369 SPA17Q15506 151 aa9.44□□□□□ -0.9
SHQ1-203ENST00000463369 TKFCQ3LXA3 575 aa9.44□□□□□ -0.9
SHQ1-203ENST00000463369 ZNF658Q5TYW1 1059 aaPredicted RBP9.44□□□□□ -0.9
SHQ1-203ENST00000463369 GKAP1Q5VSY0 366 aaPredicted RBP9.44□□□□□ -0.9
SHQ1-203ENST00000463369 MFSD6Q6ZSS7 791 aa9.44□□□□□ -0.9
SHQ1-203ENST00000463369 MAATS1Q7Z4T9 603 aa9.44□□□□□ -0.9
SHQ1-203ENST00000463369 SGMS1Q86VZ5 419 aa9.44□□□□□ -0.9
SHQ1-203ENST00000463369 IFNL1Q8IU54 200 aa9.44□□□□□ -0.9
SHQ1-203ENST00000463369 SPDYE1Q8NFV5 336 aaPredicted RBP9.44□□□□□ -0.9
SHQ1-203ENST00000463369 ZBTB10Q96DT7 871 aa9.44□□□□□ -0.9
SHQ1-203ENST00000463369 TTYH3Q9C0H2 523 aa9.44□□□□□ -0.9
SHQ1-203ENST00000463369 RNF41Q9H4P4 317 aaPredicted RBP9.44□□□□□ -0.9
SHQ1-203ENST00000463369 SH2D4AQ9H788 454 aa9.44□□□□□ -0.9
SHQ1-203ENST00000463369 CNNM2Q9H8M5 875 aa9.44□□□□□ -0.9
SHQ1-203ENST00000463369 ZNF408Q9H9D4 720 aa9.44□□□□□ -0.9
SHQ1-203ENST00000463369 NEUROD4Q9HD90 331 aa9.44□□□□□ -0.9
SHQ1-203ENST00000463369 CABP5Q9NP86 173 aa9.44□□□□□ -0.9
SHQ1-203ENST00000463369 PLCB1Q9NQ66 1216 aa9.44□□□□□ -0.9
SHQ1-203ENST00000463369 EHD2Q9NZN4 543 aa9.44□□□□□ -0.9
SHQ1-203ENST00000463369 TMOD2Q9NZR1 351 aa9.44□□□□□ -0.9
SHQ1-203ENST00000463369 CPSF2Q9P2I0 782 aaKnown RBP9.44□□□□□ -0.9
SHQ1-203ENST00000463369 SAP30BPQ9UHR5 308 aaKnown RBP9.44□□□□□ -0.9
SHQ1-203ENST00000463369 CORO1CQ9ULV4 474 aaPredicted RBP9.44□□□□□ -0.9
SHQ1-203ENST00000463369 ERICH2A1L162 156 aa9.44□□□□□ -0.9
SHQ1-203ENST00000463369 RASSF10A6NK89 507 aa9.44□□□□□ -0.9
SHQ1-203ENST00000463369 ENO4A6NNW6 628 aa9.44□□□□□ -0.9
SHQ1-203ENST00000463369 GCOM1H8Y6P7 765 aaPredicted RBP9.44□□□□□ -0.9
SHQ1-203ENST00000463369 ATP2C2O75185 946 aa9.44□□□□□ -0.9
SHQ1-203ENST00000463369 LGR5O75473 907 aa9.44□□□□□ -0.9
SHQ1-203ENST00000463369 HEXIM1O94992 359 aaKnown RBP9.44□□□□□ -0.9
SHQ1-203ENST00000463369 MOCS3O95396 460 aa9.44□□□□□ -0.9
SHQ1-203ENST00000463369 MYZAPP0CAP1 466 aa9.44□□□□□ -0.9
SHQ1-203ENST00000463369 POU3F3P20264 500 aaPredicted RBP9.44□□□□□ -0.9
SHQ1-203ENST00000463369 EEF1GP26641 437 aaKnown RBP9.44□□□□□ -0.9
SHQ1-203ENST00000463369 HSPA9P38646 679 aaKnown RBP9.44□□□□□ -0.9
SHQ1-203ENST00000463369 PRPHP41219 470 aa9.44□□□□□ -0.9
SHQ1-203ENST00000463369 DNM2P50570 870 aa9.44□□□□□ -0.9
SHQ1-203ENST00000463369 ZBED6P86452 979 aa9.44□□□□□ -0.9
SHQ1-203ENST00000463369 TBC1D10BQ4KMP7 808 aaPredicted RBP9.44□□□□□ -0.9
SHQ1-203ENST00000463369 NFXL1Q6ZNB6 911 aa9.44□□□□□ -0.9
SHQ1-203ENST00000463369 SAMD7Q7Z3H4 446 aa9.44□□□□□ -0.9
SHQ1-203ENST00000463369 CCDC155Q8N6L0 562 aa9.44□□□□□ -0.9
SHQ1-203ENST00000463369 RAPGEF5Q92565 580 aa9.44□□□□□ -0.9
SHQ1-203ENST00000463369 STAMQ92783 540 aa9.44□□□□□ -0.9
SHQ1-203ENST00000463369 KRT23Q9C075 422 aa9.44□□□□□ -0.9
SHQ1-203ENST00000463369 LY9Q9HBG7 655 aa9.44□□□□□ -0.9
SHQ1-203ENST00000463369 INCENPQ9NQS7 918 aa9.44□□□□□ -0.9
SHQ1-203ENST00000463369 RNF14Q9UBS8 474 aa9.44□□□□□ -0.9
SHQ1-203ENST00000463369 ATP8A1Q9Y2Q0 1164 aa9.44□□□□□ -0.9
SHQ1-203ENST00000463369 CLRN2A0PK11 232 aa9.43□□□□□ -0.9
SHQ1-203ENST00000463369 GLTPD2A6NH11 291 aa9.43□□□□□ -0.9
SHQ1-203ENST00000463369 TRIM75PA6NK02 468 aa9.43□□□□□ -0.9
SHQ1-203ENST00000463369 CCT8L1PA6NM43 557 aa9.43□□□□□ -0.9
SHQ1-203ENST00000463369 PES1O00541 588 aaKnown RBP9.43□□□□□ -0.9
SHQ1-203ENST00000463369 LIN7AO14910 233 aaPredicted RBP9.43□□□□□ -0.9
SHQ1-203ENST00000463369 TMOD1P28289 359 aa9.43□□□□□ -0.9
SHQ1-203ENST00000463369 EPS15P42566 896 aa9.43□□□□□ -0.9
SHQ1-203ENST00000463369 FOXK1P85037 733 aa9.43□□□□□ -0.9
SHQ1-203ENST00000463369 EVX2Q03828 476 aa9.43□□□□□ -0.9
SHQ1-203ENST00000463369 BIRC3Q13489 604 aa9.43□□□□□ -0.9
SHQ1-203ENST00000463369 NCOA4Q13772 614 aa9.43□□□□□ -0.9
SHQ1-203ENST00000463369 CFAP221Q4G0U5 840 aa9.43□□□□□ -0.9
SHQ1-203ENST00000463369 FAM83AQ86UY5 434 aa9.43□□□□□ -0.9
SHQ1-203ENST00000463369 ZFPM1Q8IX07 1006 aa9.43□□□□□ -0.9
SHQ1-203ENST00000463369 REM2Q8IYK8 340 aaPredicted RBP9.43□□□□□ -0.9
SHQ1-203ENST00000463369 LILRB2Q8N423 598 aa9.43□□□□□ -0.9
SHQ1-203ENST00000463369 CASKIN2Q8WXE0 1202 aa9.43□□□□□ -0.9
SHQ1-203ENST00000463369 FERMT2Q96AC1 680 aa9.43□□□□□ -0.9
SHQ1-203ENST00000463369 CCDC42Q96M95 316 aa9.43□□□□□ -0.9
SHQ1-203ENST00000463369 PSMB7Q99436 277 aa9.43□□□□□ -0.9
SHQ1-203ENST00000463369 MYL10Q9BUA6 226 aa9.43□□□□□ -0.9
SHQ1-203ENST00000463369 MKNK1Q9BUB5 465 aa9.43□□□□□ -0.9
SHQ1-203ENST00000463369 BLZF1Q9H2G9 400 aa9.43□□□□□ -0.9
SHQ1-203ENST00000463369 DHX36Q9H2U1 1008 aaKnown RBP9.43□□□□□ -0.9
SHQ1-203ENST00000463369 MLXIPQ9HAP2 919 aa9.43□□□□□ -0.9
SHQ1-203ENST00000463369 CYLDQ9NQC7 956 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms