RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 ATOH1Q92858 354 aaPredicted RBP23.4■■□□□ 1.34
CPSF7-209ENST00000463244 RIT2Q99578 217 aa23.4■■□□□ 1.34
CPSF7-209ENST00000463244 PLXNA3P51805 1871 aa23.4■■□□□ 1.34
CPSF7-209ENST00000463244 NT5C1B-RDH14C9J2C7 533 aa23.39■■□□□ 1.33
CPSF7-209ENST00000463244 BRD1O95696 1058 aa23.39■■□□□ 1.33
CPSF7-209ENST00000463244 CPA1P15085 419 aa23.39■■□□□ 1.33
CPSF7-209ENST00000463244 SFNP31947 248 aa23.39■■□□□ 1.33
CPSF7-209ENST00000463244 TARBP2Q15633 366 aaKnown RBP23.39■■□□□ 1.33
CPSF7-209ENST00000463244 Q6ZUG5 572 aa23.39■■□□□ 1.33
CPSF7-209ENST00000463244 SLC5A5Q92911 643 aa23.39■■□□□ 1.33
CPSF7-209ENST00000463244 PHKBQ93100 1093 aa23.39■■□□□ 1.33
CPSF7-209ENST00000463244 TMEM169Q96HH4 297 aa23.39■■□□□ 1.33
CPSF7-209ENST00000463244 CHMP2AO43633 222 aa23.38■■□□□ 1.33
CPSF7-209ENST00000463244 GAS7O60861 476 aa23.38■■□□□ 1.33
CPSF7-209ENST00000463244 CSDE1O75534 798 aaKnown RBP23.38■■□□□ 1.33
CPSF7-209ENST00000463244 CXCL14O95715 111 aa23.38■■□□□ 1.33
CPSF7-209ENST00000463244 MTHFRP42898 656 aa23.38■■□□□ 1.33
CPSF7-209ENST00000463244 JAK3P52333 1124 aa23.38■■□□□ 1.33
CPSF7-209ENST00000463244 DRP2Q13474 957 aa23.38■■□□□ 1.33
CPSF7-209ENST00000463244 BMS1Q14692 1282 aaKnown RBP23.38■■□□□ 1.33
CPSF7-209ENST00000463244 VPS52Q8N1B4 723 aa23.38■■□□□ 1.33
CPSF7-209ENST00000463244 CCDC148Q8NFR7 591 aa23.38■■□□□ 1.33
CPSF7-209ENST00000463244 RSPH1Q8WYR4 309 aa23.38■■□□□ 1.33
CPSF7-209ENST00000463244 BRF1Q92994 677 aa23.38■■□□□ 1.33
CPSF7-209ENST00000463244 CCDC136Q96JN2 1154 aa23.38■■□□□ 1.33
CPSF7-209ENST00000463244 ZBP1Q9H171 429 aa23.38■■□□□ 1.33
CPSF7-209ENST00000463244 UNC45AQ9H3U1 944 aa23.38■■□□□ 1.33
CPSF7-209ENST00000463244 CHST12Q9NRB3 414 aa23.38■■□□□ 1.33
CPSF7-209ENST00000463244 H0Y858 1186 aa23.37■■□□□ 1.33
CPSF7-209ENST00000463244 GALR2O43603 387 aaPredicted RBP23.37■■□□□ 1.33
CPSF7-209ENST00000463244 CA8P35219 290 aa23.37■■□□□ 1.33
CPSF7-209ENST00000463244 PHKA2P46019 1235 aa23.37■■□□□ 1.33
CPSF7-209ENST00000463244 USP11P51784 963 aa23.37■■□□□ 1.33
CPSF7-209ENST00000463244 CDC42EP1Q00587 391 aa23.37■■□□□ 1.33
CPSF7-209ENST00000463244 NTRK3Q16288 839 aa23.37■■□□□ 1.33
CPSF7-209ENST00000463244 LRCH2Q5VUJ6 765 aa23.37■■□□□ 1.33
CPSF7-209ENST00000463244 TMEM173Q86WV6 379 aaPredicted RBP23.37■■□□□ 1.33
CPSF7-209ENST00000463244 SNX27Q96L92 541 aa23.37■■□□□ 1.33
CPSF7-209ENST00000463244 TRAIPQ9BWF2 469 aa23.37■■□□□ 1.33
CPSF7-209ENST00000463244 GCOM2Q9BZD3 368 aaPredicted RBP23.37■■□□□ 1.33
CPSF7-209ENST00000463244 IRAK3Q9Y616 596 aa23.37■■□□□ 1.33
CPSF7-209ENST00000463244 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.36■■□□□ 1.33
CPSF7-209ENST00000463244 ZC3H11AO75152 810 aaKnown RBP eCLIP23.36■■□□□ 1.33
CPSF7-209ENST00000463244 WEE2P0C1S8 567 aa23.36■■□□□ 1.33
CPSF7-209ENST00000463244 AKAP17AQ02040 695 aaKnown RBP23.36■■□□□ 1.33
CPSF7-209ENST00000463244 RARS2Q5T160 578 aaKnown RBP23.36■■□□□ 1.33
CPSF7-209ENST00000463244 SKAP1Q86WV1 359 aa23.36■■□□□ 1.33
CPSF7-209ENST00000463244 GJA10Q969M2 543 aa23.36■■□□□ 1.33
CPSF7-209ENST00000463244 CEP89Q96ST8 783 aa23.36■■□□□ 1.33
CPSF7-209ENST00000463244 TEKT3Q9BXF9 490 aa23.36■■□□□ 1.33
CPSF7-209ENST00000463244 RNF26Q9BY78 433 aaPredicted RBP23.36■■□□□ 1.33
CPSF7-209ENST00000463244 NIFKQ9BYG3 293 aaKnown RBP23.36■■□□□ 1.33
CPSF7-209ENST00000463244 DZANK1Q9NVP4 752 aa23.36■■□□□ 1.33
CPSF7-209ENST00000463244 DENND4AQ7Z401 1863 aa23.35■■□□□ 1.33
CPSF7-209ENST00000463244 IGKV6-21A0A0C4DH24 114 aa23.35■■□□□ 1.33
CPSF7-209ENST00000463244 CARNS1A5YM72 827 aa23.35■■□□□ 1.33
CPSF7-209ENST00000463244 KIAA1841Q6NSI8 718 aa23.35■■□□□ 1.33
CPSF7-209ENST00000463244 DDX53Q86TM3 631 aaKnown RBP23.35■■□□□ 1.33
CPSF7-209ENST00000463244 ZDHHC14Q8IZN3 488 aa23.35■■□□□ 1.33
CPSF7-209ENST00000463244 FBXL16Q8N461 479 aa23.35■■□□□ 1.33
CPSF7-209ENST00000463244 C12orf76Q8N812 135 aaPredicted RBP23.35■■□□□ 1.33
CPSF7-209ENST00000463244 RDM1Q8NG50 284 aa23.35■■□□□ 1.33
CPSF7-209ENST00000463244 AUTS2Q8WXX7 1259 aa23.35■■□□□ 1.33
CPSF7-209ENST00000463244 KCNB2Q92953 911 aa23.35■■□□□ 1.33
CPSF7-209ENST00000463244 LPPQ93052 612 aa23.35■■□□□ 1.33
CPSF7-209ENST00000463244 IGSF21Q96ID5 467 aa23.35■■□□□ 1.33
CPSF7-209ENST00000463244 SMOC2Q9H3U7 446 aa23.35■■□□□ 1.33
CPSF7-209ENST00000463244 VPS54Q9P1Q0 977 aa23.35■■□□□ 1.33
CPSF7-209ENST00000463244 SEPT9Q9UHD8 586 aaPredicted RBP23.35■■□□□ 1.33
CPSF7-209ENST00000463244 PROB1E7EW31 1015 aa23.34■■□□□ 1.33
CPSF7-209ENST00000463244 PSMD10O75832 226 aa23.34■■□□□ 1.33
CPSF7-209ENST00000463244 STBD1O95210 358 aa23.34■■□□□ 1.33
CPSF7-209ENST00000463244 ASGR2P07307 311 aa23.34■■□□□ 1.33
CPSF7-209ENST00000463244 CTSAP10619 480 aa23.34■■□□□ 1.33
CPSF7-209ENST00000463244 EPCAMP16422 314 aa23.34■■□□□ 1.33
CPSF7-209ENST00000463244 SFPQP23246 707 aaKnown RBP eCLIP23.34■■□□□ 1.33
CPSF7-209ENST00000463244 POLGP54098 1239 aaPredicted RBP23.34■■□□□ 1.33
CPSF7-209ENST00000463244 GIT2Q14161 759 aa23.34■■□□□ 1.33
CPSF7-209ENST00000463244 MTERF2Q49AM1 385 aa23.34■■□□□ 1.33
CPSF7-209ENST00000463244 XKR3Q5GH77 459 aa23.34■■□□□ 1.33
CPSF7-209ENST00000463244 TWF2Q6IBS0 349 aaKnown RBP23.34■■□□□ 1.33
CPSF7-209ENST00000463244 TMEM105Q8N8V8 129 aa23.34■■□□□ 1.33
CPSF7-209ENST00000463244 TDRD5Q8NAT2 981 aaKnown RBP23.34■■□□□ 1.33
CPSF7-209ENST00000463244 JAKMIP1Q96N16 626 aaKnown RBP23.34■■□□□ 1.33
CPSF7-209ENST00000463244 AGXT2Q9BYV1 514 aa23.34■■□□□ 1.33
CPSF7-209ENST00000463244 TBC1D13Q9NVG8 400 aa23.34■■□□□ 1.33
CPSF7-209ENST00000463244 USTQ9Y2C2 406 aa23.34■■□□□ 1.33
CPSF7-209ENST00000463244 DCHS1Q96JQ0 3298 aa23.34■■□□□ 1.33
CPSF7-209ENST00000463244 A0A087WZ62 844 aa23.33■■□□□ 1.33
CPSF7-209ENST00000463244 TMEM150BA6NC51 233 aa23.33■■□□□ 1.33
CPSF7-209ENST00000463244 CDC45O75419 566 aa23.33■■□□□ 1.33
CPSF7-209ENST00000463244 Q4G0T1 1027 aa23.33■■□□□ 1.33
CPSF7-209ENST00000463244 ATAT1Q5SQI0 421 aa23.33■■□□□ 1.33
CPSF7-209ENST00000463244 KANK3Q6NY19 840 aa23.33■■□□□ 1.33
CPSF7-209ENST00000463244 B3GNT9Q6UX72 402 aa23.33■■□□□ 1.33
CPSF7-209ENST00000463244 MIER3Q7Z3K6 550 aa23.33■■□□□ 1.33
CPSF7-209ENST00000463244 ZNF410Q86VK4 478 aa23.33■■□□□ 1.33
CPSF7-209ENST00000463244 TMEM87AQ8NBN3 555 aa23.33■■□□□ 1.33
CPSF7-209ENST00000463244 FDXACB1Q9BRP7 624 aaPredicted RBP23.33■■□□□ 1.33
CPSF7-209ENST00000463244 SLC26A6Q9BXS9 759 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms