RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 PCBP1Q15365 356 aaKnown RBP eCLIP14.61□□□□□ -0.07
HDAC1-203ENST00000463172 HAUS3Q68CZ6 603 aa14.61□□□□□ -0.07
HDAC1-203ENST00000463172 CATSPER4Q7RTX7 472 aa14.61□□□□□ -0.07
HDAC1-203ENST00000463172 SRGAP1Q7Z6B7 1085 aa14.61□□□□□ -0.07
HDAC1-203ENST00000463172 CRIPAKQ8N1N5 446 aa14.61□□□□□ -0.07
HDAC1-203ENST00000463172 ZNF668Q96K58 619 aaPredicted RBP14.61□□□□□ -0.07
HDAC1-203ENST00000463172 TBC1D32Q96NH3 1257 aa14.61□□□□□ -0.07
HDAC1-203ENST00000463172 HSD17B14Q9BPX1 270 aa14.61□□□□□ -0.07
HDAC1-203ENST00000463172 TMEM117Q9H0C3 514 aa14.61□□□□□ -0.07
HDAC1-203ENST00000463172 NSUN3Q9H649 340 aaKnown RBP14.61□□□□□ -0.07
HDAC1-203ENST00000463172 TUFT1Q9NNX1 390 aa14.61□□□□□ -0.07
HDAC1-203ENST00000463172 MRPL42Q9Y6G3 142 aaKnown RBP14.61□□□□□ -0.07
HDAC1-203ENST00000463172 BRWD1Q9NSI6 2320 aa14.61□□□□□ -0.07
HDAC1-203ENST00000463172 KIAA1671Q9BY89 1806 aa14.6□□□□□ -0.07
HDAC1-203ENST00000463172 LAG3P18627 525 aa14.6□□□□□ -0.07
HDAC1-203ENST00000463172 PHKA2P46019 1235 aa14.6□□□□□ -0.07
HDAC1-203ENST00000463172 RAB27AP51159 221 aa14.6□□□□□ -0.07
HDAC1-203ENST00000463172 DRP2Q13474 957 aa14.6□□□□□ -0.07
HDAC1-203ENST00000463172 ZNF174Q15697 407 aa14.6□□□□□ -0.07
HDAC1-203ENST00000463172 TWF2Q6IBS0 349 aaKnown RBP14.6□□□□□ -0.07
HDAC1-203ENST00000463172 RNF169Q8NCN4 708 aa14.6□□□□□ -0.07
HDAC1-203ENST00000463172 PRPF31Q8WWY3 499 aaKnown RBP14.6□□□□□ -0.07
HDAC1-203ENST00000463172 TMX3Q96JJ7 454 aa14.6□□□□□ -0.07
HDAC1-203ENST00000463172 NACC1Q96RE7 527 aa14.6□□□□□ -0.07
HDAC1-203ENST00000463172 MRPL9Q9BYD2 267 aaKnown RBP14.6□□□□□ -0.07
HDAC1-203ENST00000463172 PIN4Q9Y237 131 aaKnown RBP14.6□□□□□ -0.07
HDAC1-203ENST00000463172 A0A0U1RQF3 1178 aa14.59□□□□□ -0.07
HDAC1-203ENST00000463172 LAD1O00515 517 aa14.59□□□□□ -0.07
HDAC1-203ENST00000463172 ERLIN2O94905 339 aa14.59□□□□□ -0.07
HDAC1-203ENST00000463172 SRGAP2CP0DJJ0 459 aa14.59□□□□□ -0.07
HDAC1-203ENST00000463172 MUTP22033 750 aa14.59□□□□□ -0.07
HDAC1-203ENST00000463172 U2AF2P26368 475 aaKnown RBP eCLIP14.59□□□□□ -0.07
HDAC1-203ENST00000463172 TECP42680 631 aa14.59□□□□□ -0.07
HDAC1-203ENST00000463172 UBE3AQ05086 875 aa14.59□□□□□ -0.07
HDAC1-203ENST00000463172 LAMTOR4Q0VGL1 99 aa14.59□□□□□ -0.07
HDAC1-203ENST00000463172 MCTP1Q6DN14 999 aa14.59□□□□□ -0.07
HDAC1-203ENST00000463172 ECHDC2Q86YB7 292 aa14.59□□□□□ -0.07
HDAC1-203ENST00000463172 LRRC43Q8N309 656 aa14.59□□□□□ -0.07
HDAC1-203ENST00000463172 TMEM143Q96AN5 459 aa14.59□□□□□ -0.07
HDAC1-203ENST00000463172 PGBD4Q96DM1 585 aa14.59□□□□□ -0.07
HDAC1-203ENST00000463172 POLR3CQ9BUI4 534 aaPredicted RBP14.59□□□□□ -0.07
HDAC1-203ENST00000463172 WRAP73Q9P2S5 460 aaPredicted RBP14.59□□□□□ -0.07
HDAC1-203ENST00000463172 SMC3Q9UQE7 1217 aa14.59□□□□□ -0.07
HDAC1-203ENST00000463172 FSD2A1L4K1 749 aa14.58□□□□□ -0.08
HDAC1-203ENST00000463172 POTEMA6NI47 508 aa14.58□□□□□ -0.08
HDAC1-203ENST00000463172 FGFR4P22455 802 aa14.58□□□□□ -0.08
HDAC1-203ENST00000463172 PPM1AP35813 382 aa14.58□□□□□ -0.08
HDAC1-203ENST00000463172 PUS10Q3MIT2 529 aaKnown RBP14.58□□□□□ -0.08
HDAC1-203ENST00000463172 RILPL1Q5EBL4 403 aa14.58□□□□□ -0.08
HDAC1-203ENST00000463172 FAM102BQ5T8I3 360 aa14.58□□□□□ -0.08
HDAC1-203ENST00000463172 FERMT3Q86UX7 667 aa14.58□□□□□ -0.08
HDAC1-203ENST00000463172 THNSL1Q8IYQ7 743 aa14.58□□□□□ -0.08
HDAC1-203ENST00000463172 MCPH1Q8NEM0 835 aa14.58□□□□□ -0.08
HDAC1-203ENST00000463172 ADAMTS19Q8TE59 1207 aa14.58□□□□□ -0.08
HDAC1-203ENST00000463172 TRAIPQ9BWF2 469 aa14.58□□□□□ -0.08
HDAC1-203ENST00000463172 TMEM60Q9H2L4 133 aa14.58□□□□□ -0.08
HDAC1-203ENST00000463172 UBE2ZQ9H832 354 aaPredicted RBP14.58□□□□□ -0.08
HDAC1-203ENST00000463172 BMP2KQ9NSY1 1161 aaPredicted RBP14.58□□□□□ -0.08
HDAC1-203ENST00000463172 PUF60Q9UHX1 559 aaKnown RBP14.58□□□□□ -0.08
HDAC1-203ENST00000463172 PLAGL2Q9UPG8 496 aa14.58□□□□□ -0.08
HDAC1-203ENST00000463172 FAM50BQ9Y247 325 aa14.58□□□□□ -0.08
HDAC1-203ENST00000463172 MYO7AQ13402 2215 aa14.58□□□□□ -0.08
HDAC1-203ENST00000463172 REV3LO60673 3130 aa14.57□□□□□ -0.08
HDAC1-203ENST00000463172 RBAK-RBAKDNI3L0D1 243 aa14.57□□□□□ -0.08
HDAC1-203ENST00000463172 GRM6O15303 877 aa14.57□□□□□ -0.08
HDAC1-203ENST00000463172 LINC00271P0C7V0 271 aa14.57□□□□□ -0.08
HDAC1-203ENST00000463172 FGFR1P11362 822 aa14.57□□□□□ -0.08
HDAC1-203ENST00000463172 RPA1P27694 616 aa14.57□□□□□ -0.08
HDAC1-203ENST00000463172 GJB2P29033 226 aa14.57□□□□□ -0.08
HDAC1-203ENST00000463172 AXLP30530 894 aa14.57□□□□□ -0.08
HDAC1-203ENST00000463172 RARRES1P49788 294 aa14.57□□□□□ -0.08
HDAC1-203ENST00000463172 POU5F1BQ06416 359 aa14.57□□□□□ -0.08
HDAC1-203ENST00000463172 TCEAL5Q5H9L2 206 aa14.57□□□□□ -0.08
HDAC1-203ENST00000463172 PDE12Q6L8Q7 609 aaKnown RBP14.57□□□□□ -0.08
HDAC1-203ENST00000463172 EP400NLQ6ZTU2 488 aa14.57□□□□□ -0.08
HDAC1-203ENST00000463172 KSR1Q8IVT5 923 aa14.57□□□□□ -0.08
HDAC1-203ENST00000463172 ZNF579Q8NAF0 562 aaKnown RBP14.57□□□□□ -0.08
HDAC1-203ENST00000463172 KLHL23Q8NBE8 558 aa14.57□□□□□ -0.08
HDAC1-203ENST00000463172 RNF149Q8NC42 400 aa14.57□□□□□ -0.08
HDAC1-203ENST00000463172 ALG13Q9NP73 1137 aaKnown RBP14.57□□□□□ -0.08
HDAC1-203ENST00000463172 AGPAT5Q9NUQ2 364 aa14.57□□□□□ -0.08
HDAC1-203ENST00000463172 TYW1Q9NV66 732 aaKnown RBP14.57□□□□□ -0.08
HDAC1-203ENST00000463172 DBR1Q9UK59 544 aaKnown RBP14.57□□□□□ -0.08
HDAC1-203ENST00000463172 ARHGEF35A5YM69 484 aa14.56□□□□□ -0.08
HDAC1-203ENST00000463172 WNT7AO00755 349 aa14.56□□□□□ -0.08
HDAC1-203ENST00000463172 CSDE1O75534 798 aaKnown RBP14.56□□□□□ -0.08
HDAC1-203ENST00000463172 GATMP50440 423 aa14.56□□□□□ -0.08
HDAC1-203ENST00000463172 FXR2P51116 673 aaKnown RBP eCLIP14.56□□□□□ -0.083e-6■□□□□ 8
HDAC1-203ENST00000463172 TFF2Q03403 129 aa14.56□□□□□ -0.08
HDAC1-203ENST00000463172 KRT17Q04695 432 aa14.56□□□□□ -0.08
HDAC1-203ENST00000463172 PDIA5Q14554 519 aa14.56□□□□□ -0.08
HDAC1-203ENST00000463172 BMS1Q14692 1282 aaKnown RBP14.56□□□□□ -0.08
HDAC1-203ENST00000463172 GLB1LQ6UWU2 654 aa14.56□□□□□ -0.08
HDAC1-203ENST00000463172 CATSPER3Q86XQ3 398 aa14.56□□□□□ -0.08
HDAC1-203ENST00000463172 HACE1Q8IYU2 909 aa14.56□□□□□ -0.08
HDAC1-203ENST00000463172 COLGALT1Q8NBJ5 622 aa14.56□□□□□ -0.08
HDAC1-203ENST00000463172 CNNM3Q8NE01 707 aa14.56□□□□□ -0.08
HDAC1-203ENST00000463172 MICAL1Q8TDZ2 1067 aa14.56□□□□□ -0.08
HDAC1-203ENST00000463172 PIGOQ8TEQ8 1089 aa14.56□□□□□ -0.08
HDAC1-203ENST00000463172 POF1BQ8WVV4 589 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms