RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 SLC6A15Q9H2J7 730 aa5.66□□□□□ -1.5
USH2A-203ENST00000463147 AGO3Q9H9G7 860 aaKnown RBP5.66□□□□□ -1.5
USH2A-203ENST00000463147 HOMER2Q9NSB8 354 aa5.66□□□□□ -1.5
USH2A-203ENST00000463147 PACSIN3Q9UKS6 424 aa5.66□□□□□ -1.5
USH2A-203ENST00000463147 PLD2O14939 933 aa5.65□□□□□ -1.5
USH2A-203ENST00000463147 PDE8AO60658 829 aa5.65□□□□□ -1.5
USH2A-203ENST00000463147 MPIG6BO95866 241 aa5.65□□□□□ -1.5
USH2A-203ENST00000463147 CNGA1P29973 690 aa5.65□□□□□ -1.5
USH2A-203ENST00000463147 SLC25A3Q00325 362 aa5.65□□□□□ -1.5
USH2A-203ENST00000463147 TOB2Q14106 344 aaPredicted RBP5.65□□□□□ -1.5
USH2A-203ENST00000463147 FNDC3BQ53EP0 1204 aaKnown RBP5.65□□□□□ -1.5
USH2A-203ENST00000463147 KLHDC10Q6PID8 442 aa5.65□□□□□ -1.5
USH2A-203ENST00000463147 MRGPREQ86SM8 312 aa5.65□□□□□ -1.5
USH2A-203ENST00000463147 OSTM1Q86WC4 334 aa5.65□□□□□ -1.5
USH2A-203ENST00000463147 PRIMA1Q86XR5 153 aa5.65□□□□□ -1.5
USH2A-203ENST00000463147 PTRH1Q86Y79 214 aaKnown RBP5.65□□□□□ -1.5
USH2A-203ENST00000463147 CHAC2Q8WUX2 184 aa5.65□□□□□ -1.5
USH2A-203ENST00000463147 JDP2Q8WYK2 163 aa5.65□□□□□ -1.5
USH2A-203ENST00000463147 PTPRN2Q92932 1015 aa5.65□□□□□ -1.5
USH2A-203ENST00000463147 GFM2Q969S9 779 aaKnown RBP5.65□□□□□ -1.5
USH2A-203ENST00000463147 SLC7A6OSQ96CW6 309 aaPredicted RBP5.65□□□□□ -1.5
USH2A-203ENST00000463147 TARS2Q9BW92 718 aaKnown RBP5.65□□□□□ -1.5
USH2A-203ENST00000463147 CAAP1Q9H8G2 361 aa5.65□□□□□ -1.5
USH2A-203ENST00000463147 ASB1Q9Y576 335 aa5.65□□□□□ -1.5
USH2A-203ENST00000463147 CTDP1Q9Y5B0 961 aaPredicted RBP5.65□□□□□ -1.5
USH2A-203ENST00000463147 TRBV23-1A0A0A0MS06 115 aa5.64□□□□□ -1.51
USH2A-203ENST00000463147 CCDC163A0A0D9SF12 145 aa5.64□□□□□ -1.51
USH2A-203ENST00000463147 GOLGA6L6A8MZA4 724 aa5.64□□□□□ -1.51
USH2A-203ENST00000463147 RPS6KA4O75676 772 aa5.64□□□□□ -1.51
USH2A-203ENST00000463147 DNAJC8O75937 253 aaPredicted RBP5.64□□□□□ -1.51
USH2A-203ENST00000463147 EYA4O95677 639 aa5.64□□□□□ -1.51
USH2A-203ENST00000463147 AMY2AP04746 511 aa5.64□□□□□ -1.51
USH2A-203ENST00000463147 C6orf222P0C671 652 aaPredicted RBP5.64□□□□□ -1.51
USH2A-203ENST00000463147 AMY2BP19961 511 aa5.64□□□□□ -1.51
USH2A-203ENST00000463147 APEX1P27695 318 aaKnown RBP5.64□□□□□ -1.51
USH2A-203ENST00000463147 MC4RP32245 332 aa5.64□□□□□ -1.51
USH2A-203ENST00000463147 SCNN1GP51170 649 aa5.64□□□□□ -1.51
USH2A-203ENST00000463147 FAM50AQ14320 339 aaKnown RBP5.64□□□□□ -1.51
USH2A-203ENST00000463147 PTPAQ15257 358 aa5.64□□□□□ -1.51
USH2A-203ENST00000463147 ZC3H12BQ5HYM0 836 aaKnown RBP5.64□□□□□ -1.51
USH2A-203ENST00000463147 LY6G5CQ5SRR4 150 aa5.64□□□□□ -1.51
USH2A-203ENST00000463147 ODR4Q5SWX8 454 aa5.64□□□□□ -1.51
USH2A-203ENST00000463147 MFSD5Q6N075 450 aa5.64□□□□□ -1.51
USH2A-203ENST00000463147 SYCE2Q6PIF2 218 aa5.64□□□□□ -1.51
USH2A-203ENST00000463147 FMNL3Q8IVF7 1028 aa5.64□□□□□ -1.51
USH2A-203ENST00000463147 AFAP1L2Q8N4X5 818 aa5.64□□□□□ -1.51
USH2A-203ENST00000463147 ZNF764Q96H86 408 aaPredicted RBP5.64□□□□□ -1.51
USH2A-203ENST00000463147 RIOX1Q9H6W3 641 aa5.64□□□□□ -1.51
USH2A-203ENST00000463147 UCKL1Q9NWZ5 548 aa5.64□□□□□ -1.51
USH2A-203ENST00000463147 HECAQ9UBI9 543 aaPredicted RBP5.64□□□□□ -1.51
USH2A-203ENST00000463147 WASHC2CQ9Y4E1 1318 aa5.64□□□□□ -1.51
USH2A-203ENST00000463147 BLACEA4D250 179 aa5.63□□□□□ -1.51
USH2A-203ENST00000463147 MAP4K4O95819 1239 aaPredicted RBP5.63□□□□□ -1.51
USH2A-203ENST00000463147 KRT15P19012 456 aa5.63□□□□□ -1.51
USH2A-203ENST00000463147 STAT5BP51692 787 aa5.63□□□□□ -1.51
USH2A-203ENST00000463147 ADCY7P51828 1080 aa5.63□□□□□ -1.51
USH2A-203ENST00000463147 TAF7LQ5H9L4 462 aa5.63□□□□□ -1.51
USH2A-203ENST00000463147 CCDC181Q5TID7 509 aa5.63□□□□□ -1.51
USH2A-203ENST00000463147 LHFPL2Q6ZUX7 228 aa5.63□□□□□ -1.51
USH2A-203ENST00000463147 SLC7A14Q8TBB6 771 aa5.63□□□□□ -1.51
USH2A-203ENST00000463147 IPO9Q96P70 1041 aaKnown RBP5.63□□□□□ -1.51
USH2A-203ENST00000463147 GPR87Q9BY21 358 aa5.63□□□□□ -1.51
USH2A-203ENST00000463147 TRIM39Q9HCM9 518 aa5.63□□□□□ -1.51
USH2A-203ENST00000463147 ZNHIT2Q9UHR6 403 aa5.63□□□□□ -1.51
USH2A-203ENST00000463147 XDHP47989 1333 aa5.63□□□□□ -1.51
USH2A-203ENST00000463147 ASXL2Q76L83 1435 aa5.63□□□□□ -1.51
USH2A-203ENST00000463147 ZNF561-AS1K7EIQ3 104 aa5.62□□□□□ -1.51
USH2A-203ENST00000463147 PYGMP11217 842 aa5.62□□□□□ -1.51
USH2A-203ENST00000463147 PROZP22891 400 aa5.62□□□□□ -1.51
USH2A-203ENST00000463147 CD38P28907 300 aa5.62□□□□□ -1.51
USH2A-203ENST00000463147 IL12RB1P42701 662 aa5.62□□□□□ -1.51
USH2A-203ENST00000463147 LACTBP83111 547 aaPredicted RBP5.62□□□□□ -1.51
USH2A-203ENST00000463147 EXOSC10Q01780 885 aaKnown RBP5.62□□□□□ -1.51
USH2A-203ENST00000463147 RABL3Q5HYI8 236 aa5.62□□□□□ -1.51
USH2A-203ENST00000463147 MBNL2Q5VZF2 373 aaKnown RBP5.62□□□□□ -1.51
USH2A-203ENST00000463147 CNNM4Q6P4Q7 775 aa5.62□□□□□ -1.51
USH2A-203ENST00000463147 FAM111BQ6SJ93 734 aa5.62□□□□□ -1.51
USH2A-203ENST00000463147 LRSAM1Q6UWE0 723 aa5.62□□□□□ -1.51
USH2A-203ENST00000463147 Q6ZRM9 215 aa5.62□□□□□ -1.51
USH2A-203ENST00000463147 LRRTM3Q86VH5 581 aa5.62□□□□□ -1.51
USH2A-203ENST00000463147 HIPK4Q8NE63 616 aa5.62□□□□□ -1.51
USH2A-203ENST00000463147 PCDH19Q8TAB3 1148 aa5.62□□□□□ -1.51
USH2A-203ENST00000463147 GCDHQ92947 438 aaPredicted RBP5.62□□□□□ -1.51
USH2A-203ENST00000463147 TSR2Q969E8 191 aaKnown RBP5.62□□□□□ -1.51
USH2A-203ENST00000463147 CDC6Q99741 560 aa5.62□□□□□ -1.51
USH2A-203ENST00000463147 FZD1Q9UP38 647 aa5.62□□□□□ -1.51
USH2A-203ENST00000463147 EID1Q9Y6B2 187 aa5.62□□□□□ -1.51
USH2A-203ENST00000463147 ARVCFO00192 962 aa5.61□□□□□ -1.51
USH2A-203ENST00000463147 MFAP3LO75121 409 aa5.61□□□□□ -1.51
USH2A-203ENST00000463147 JAM2P57087 298 aa5.61□□□□□ -1.51
USH2A-203ENST00000463147 ATP2C1P98194 919 aaPredicted RBP5.61□□□□□ -1.51
USH2A-203ENST00000463147 GUCY1A3Q02108 690 aa5.61□□□□□ -1.51
USH2A-203ENST00000463147 TAP1Q03518 808 aa5.61□□□□□ -1.51
USH2A-203ENST00000463147 ADAM15Q13444 863 aa5.61□□□□□ -1.51
USH2A-203ENST00000463147 PCBP1Q15365 356 aaKnown RBP eCLIP5.61□□□□□ -1.51
USH2A-203ENST00000463147 ELAVL1Q15717 326 aaKnown RBP5.61□□□□□ -1.51
USH2A-203ENST00000463147 GAGE13Q4V321 117 aa5.61□□□□□ -1.51
USH2A-203ENST00000463147 FGD2Q7Z6J4 655 aa5.61□□□□□ -1.51
USH2A-203ENST00000463147 ZNF276Q8N554 614 aa5.61□□□□□ -1.51
USH2A-203ENST00000463147 SCLYQ96I15 445 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms