RNA–Protein interactions for RNA: ENST00000462743.1

HPS1-206, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-206ENST00000462743 ERVK-21P61565 698 aa13.42□□□□□ -0.26
HPS1-206ENST00000462743 GRIN1Q05586 938 aa13.42□□□□□ -0.26
HPS1-206ENST00000462743 TFDP1Q14186 410 aa13.42□□□□□ -0.26
HPS1-206ENST00000462743 BECN1Q14457 450 aa13.42□□□□□ -0.26
HPS1-206ENST00000462743 TMEM119Q4V9L6 283 aa13.42□□□□□ -0.26
HPS1-206ENST00000462743 TMCO2Q7Z6W1 182 aaPredicted RBP13.42□□□□□ -0.26
HPS1-206ENST00000462743 RNF149Q8NC42 400 aa13.42□□□□□ -0.26
HPS1-206ENST00000462743 LINC00301Q8NCQ3 95 aa13.42□□□□□ -0.26
HPS1-206ENST00000462743 ZNF668Q96K58 619 aaPredicted RBP13.42□□□□□ -0.26
HPS1-206ENST00000462743 CCDC43Q96MW1 224 aaKnown RBP13.42□□□□□ -0.26
HPS1-206ENST00000462743 GUCD1Q96NT3 240 aa13.42□□□□□ -0.26
HPS1-206ENST00000462743 PPP1R16BQ96T49 567 aa13.42□□□□□ -0.26
HPS1-206ENST00000462743 BHMT2Q9H2M3 363 aa13.42□□□□□ -0.26
HPS1-206ENST00000462743 DACT1Q9NYF0 836 aa13.42□□□□□ -0.26
HPS1-206ENST00000462743 FBXO2Q9UK22 296 aaPredicted RBP13.42□□□□□ -0.26
HPS1-206ENST00000462743 COL4A6Q14031 1691 aa13.41□□□□□ -0.26
HPS1-206ENST00000462743 DENND3A2RUS2 1198 aa13.41□□□□□ -0.26
HPS1-206ENST00000462743 E9PMD0 336 aa13.41□□□□□ -0.26
HPS1-206ENST00000462743 USO1O60763 962 aaKnown RBP13.41□□□□□ -0.26
HPS1-206ENST00000462743 ZNF623O75123 536 aa13.41□□□□□ -0.26
HPS1-206ENST00000462743 CA3P07451 260 aa13.41□□□□□ -0.26
HPS1-206ENST00000462743 SRGAP2CP0DJJ0 459 aa13.41□□□□□ -0.26
HPS1-206ENST00000462743 POU3F3P20264 500 aaPredicted RBP13.41□□□□□ -0.26
HPS1-206ENST00000462743 SFPQP23246 707 aaKnown RBP eCLIP13.41□□□□□ -0.26
HPS1-206ENST00000462743 PHKA2P46019 1235 aa13.41□□□□□ -0.26
HPS1-206ENST00000462743 GRIN2CQ14957 1233 aa13.41□□□□□ -0.26
HPS1-206ENST00000462743 C1orf186Q6ZWK4 172 aa13.41□□□□□ -0.26
HPS1-206ENST00000462743 KCNK18Q7Z418 384 aa13.41□□□□□ -0.26
HPS1-206ENST00000462743 CABP7Q86V35 215 aa13.41□□□□□ -0.26
HPS1-206ENST00000462743 SYT2Q8N9I0 419 aaPredicted RBP13.41□□□□□ -0.26
HPS1-206ENST00000462743 ASAP3Q8TDY4 903 aa13.41□□□□□ -0.26
HPS1-206ENST00000462743 NLRP4Q96MN2 994 aa13.41□□□□□ -0.26
HPS1-206ENST00000462743 SCLT1Q96NL6 688 aa13.41□□□□□ -0.26
HPS1-206ENST00000462743 CDX2Q99626 313 aaPredicted RBP13.41□□□□□ -0.26
HPS1-206ENST00000462743 POLR3FQ9H1D9 316 aaPredicted RBP13.41□□□□□ -0.26
HPS1-206ENST00000462743 MINDY3Q9H8M7 445 aa13.41□□□□□ -0.26
HPS1-206ENST00000462743 TMEM161AQ9NX61 479 aa13.41□□□□□ -0.26
HPS1-206ENST00000462743 KCND2Q9NZV8 630 aa13.41□□□□□ -0.26
HPS1-206ENST00000462743 MYH15Q9Y2K3 1946 aa13.41□□□□□ -0.26
HPS1-206ENST00000462743 MYO7AQ13402 2215 aa13.4□□□□□ -0.26
HPS1-206ENST00000462743 A0A0U1RQF3 1178 aa13.4□□□□□ -0.26
HPS1-206ENST00000462743 LCHNA4D1U4 455 aa13.4□□□□□ -0.26
HPS1-206ENST00000462743 LINC01553A4QN01 128 aa13.4□□□□□ -0.26
HPS1-206ENST00000462743 PPP6R2O75170 966 aa13.4□□□□□ -0.26
HPS1-206ENST00000462743 CSDE1O75534 798 aaKnown RBP13.4□□□□□ -0.26
HPS1-206ENST00000462743 UPP2O95045 317 aa13.4□□□□□ -0.26
HPS1-206ENST00000462743 YEATS4O95619 227 aa13.4□□□□□ -0.26
HPS1-206ENST00000462743 BRD1O95696 1058 aa13.4□□□□□ -0.26
HPS1-206ENST00000462743 EOMESO95936 686 aa13.4□□□□□ -0.26
HPS1-206ENST00000462743 AXLP30530 894 aa13.4□□□□□ -0.26
HPS1-206ENST00000462743 HOXA11P31270 313 aaPredicted RBP13.4□□□□□ -0.26
HPS1-206ENST00000462743 CAPSQ13938 189 aa13.4□□□□□ -0.26
HPS1-206ENST00000462743 PPP2R5AQ15172 486 aa13.4□□□□□ -0.26
HPS1-206ENST00000462743 PPP2R2DQ66LE6 453 aa13.4□□□□□ -0.26
HPS1-206ENST00000462743 RINT1Q6NUQ1 792 aa13.4□□□□□ -0.26
HPS1-206ENST00000462743 SPRYD3Q8NCJ5 442 aa13.4□□□□□ -0.26
HPS1-206ENST00000462743 KIFAP3Q92845 792 aa13.4□□□□□ -0.26
HPS1-206ENST00000462743 CALML4Q96GE6 196 aa13.4□□□□□ -0.26
HPS1-206ENST00000462743 SAMD11Q96NU1 681 aa13.4□□□□□ -0.26
HPS1-206ENST00000462743 TIPINQ9BVW5 301 aa13.4□□□□□ -0.26
HPS1-206ENST00000462743 CSRNP2Q9H175 543 aa13.4□□□□□ -0.26
HPS1-206ENST00000462743 C17orf75Q9HAS0 396 aa13.4□□□□□ -0.26
HPS1-206ENST00000462743 BMP2KQ9NSY1 1161 aaPredicted RBP13.4□□□□□ -0.26
HPS1-206ENST00000462743 TFIP11Q9UBB9 837 aaKnown RBP13.4□□□□□ -0.26
HPS1-206ENST00000462743 KCNG1Q9UIX4 513 aa13.4□□□□□ -0.26
HPS1-206ENST00000462743 STXBP5LQ9Y2K9 1186 aa13.4□□□□□ -0.26
HPS1-206ENST00000462743 ZDHHC9Q9Y397 364 aa13.4□□□□□ -0.26
HPS1-206ENST00000462743 PCDHB7Q9Y5E2 793 aa13.4□□□□□ -0.26
HPS1-206ENST00000462743 PRRC2BQ5JSZ5 2229 aaKnown RBP13.4□□□□□ -0.26
HPS1-206ENST00000462743 FNDC1Q4ZHG4 1894 aaPredicted RBP13.4□□□□□ -0.26
HPS1-206ENST00000462743 MYH11P35749 1972 aa13.4□□□□□ -0.27
HPS1-206ENST00000462743 TCHHQ07283 1943 aa13.39□□□□□ -0.27
HPS1-206ENST00000462743 ARHGEF15O94989 841 aa13.39□□□□□ -0.27
HPS1-206ENST00000462743 SKIP12755 728 aa13.39□□□□□ -0.27
HPS1-206ENST00000462743 FGFR4P22455 802 aa13.39□□□□□ -0.27
HPS1-206ENST00000462743 GUCY2CP25092 1073 aa13.39□□□□□ -0.27
HPS1-206ENST00000462743 MARCKSP29966 332 aaPredicted RBP13.39□□□□□ -0.27
HPS1-206ENST00000462743 NAMPTP43490 491 aa13.39□□□□□ -0.27
HPS1-206ENST00000462743 SLC12A3P55017 1021 aa13.39□□□□□ -0.27
HPS1-206ENST00000462743 PKP1Q13835 747 aa13.39□□□□□ -0.27
HPS1-206ENST00000462743 STK38Q15208 465 aa13.39□□□□□ -0.27
HPS1-206ENST00000462743 FAM187BQ17R55 369 aa13.39□□□□□ -0.27
HPS1-206ENST00000462743 CDCA2Q69YH5 1023 aaPredicted RBP13.39□□□□□ -0.27
HPS1-206ENST00000462743 FAM117BQ6P1L5 589 aa13.39□□□□□ -0.27
HPS1-206ENST00000462743 CATSPER4Q7RTX7 472 aa13.39□□□□□ -0.27
HPS1-206ENST00000462743 ZNF598Q86UK7 904 aaKnown RBP13.39□□□□□ -0.27
HPS1-206ENST00000462743 ECHDC2Q86YB7 292 aa13.39□□□□□ -0.27
HPS1-206ENST00000462743 CMTR2Q8IYT2 770 aaKnown RBP13.39□□□□□ -0.27
HPS1-206ENST00000462743 KRI1Q8N9T8 703 aaKnown RBP13.39□□□□□ -0.27
HPS1-206ENST00000462743 RSPH1Q8WYR4 309 aa13.39□□□□□ -0.27
HPS1-206ENST00000462743 CLP1Q92989 425 aaKnown RBP13.39□□□□□ -0.27
HPS1-206ENST00000462743 CDK5RAP3Q96JB5 506 aa13.39□□□□□ -0.27
HPS1-206ENST00000462743 TGS1Q96RS0 853 aaKnown RBP13.39□□□□□ -0.27
HPS1-206ENST00000462743 YME1L1Q96TA2 773 aa13.39□□□□□ -0.27
HPS1-206ENST00000462743 NTPCRQ9BSD7 190 aaKnown RBP13.39□□□□□ -0.27
HPS1-206ENST00000462743 FZD8Q9H461 694 aa13.39□□□□□ -0.27
HPS1-206ENST00000462743 GPRC5CQ9NQ84 441 aa13.39□□□□□ -0.27
HPS1-206ENST00000462743 BLOC1S4Q9NUP1 217 aa13.39□□□□□ -0.27
HPS1-206ENST00000462743 AGPAT5Q9NUQ2 364 aa13.39□□□□□ -0.27
HPS1-206ENST00000462743 RCOR1Q9UKL0 485 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms