RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 C22orf23Q9BZE7 217 aa8.96□□□□□ -0.98
CDC42BPA-210ENST00000462553 GLT8D2Q9H1C3 349 aa8.96□□□□□ -0.98
CDC42BPA-210ENST00000462553 S1PR5Q9H228 398 aa8.96□□□□□ -0.98
CDC42BPA-210ENST00000462553 ELAC1Q9H777 363 aaKnown RBP8.96□□□□□ -0.98
CDC42BPA-210ENST00000462553 SH3GLB2Q9NR46 395 aa8.96□□□□□ -0.98
CDC42BPA-210ENST00000462553 TMEM161AQ9NX61 479 aa8.96□□□□□ -0.98
CDC42BPA-210ENST00000462553 CDH22Q9UJ99 828 aa8.96□□□□□ -0.98
CDC42BPA-210ENST00000462553 LZTS1Q9Y250 596 aa8.96□□□□□ -0.98
CDC42BPA-210ENST00000462553 PCDHB12Q9Y5F1 795 aa8.96□□□□□ -0.98
CDC42BPA-210ENST00000462553 MAFBQ9Y5Q3 323 aaPredicted RBP8.96□□□□□ -0.98
CDC42BPA-210ENST00000462553 TDRD15B5MCY1 1934 aaKnown RBP8.95□□□□□ -0.98
CDC42BPA-210ENST00000462553 HIDE1A8MVS5 230 aa8.95□□□□□ -0.98
CDC42BPA-210ENST00000462553 CPLX1O14810 134 aa8.95□□□□□ -0.98
CDC42BPA-210ENST00000462553 GPR182O15218 404 aa8.95□□□□□ -0.98
CDC42BPA-210ENST00000462553 JAK2O60674 1132 aa8.95□□□□□ -0.98
CDC42BPA-210ENST00000462553 LAG3P18627 525 aa8.95□□□□□ -0.98
CDC42BPA-210ENST00000462553 CRYBB1P53674 252 aaPredicted RBP8.95□□□□□ -0.98
CDC42BPA-210ENST00000462553 VCPP55072 806 aaKnown RBP8.95□□□□□ -0.98
CDC42BPA-210ENST00000462553 PLCB3Q01970 1234 aa8.95□□□□□ -0.98
CDC42BPA-210ENST00000462553 SIGLEC14Q08ET2 396 aa8.95□□□□□ -0.98
CDC42BPA-210ENST00000462553 CLLU1OSQ5K130 101 aa8.95□□□□□ -0.98
CDC42BPA-210ENST00000462553 SPOUT1Q5T280 376 aaKnown RBP8.95□□□□□ -0.98
CDC42BPA-210ENST00000462553 PLPP4Q5VZY2 271 aa8.95□□□□□ -0.98
CDC42BPA-210ENST00000462553 ZNF746Q6NUN9 644 aaPredicted RBP8.95□□□□□ -0.98
CDC42BPA-210ENST00000462553 ANKRD54Q6NXT1 300 aa8.95□□□□□ -0.98
CDC42BPA-210ENST00000462553 MIS18BP1Q6P0N0 1132 aa8.95□□□□□ -0.98
CDC42BPA-210ENST00000462553 CPLX2Q6PUV4 134 aaKnown RBP8.95□□□□□ -0.98
CDC42BPA-210ENST00000462553 TRIM22Q8IYM9 498 aa8.95□□□□□ -0.98
CDC42BPA-210ENST00000462553 THNSL1Q8IYQ7 743 aa8.95□□□□□ -0.98
CDC42BPA-210ENST00000462553 FBXL6Q8N531 539 aa8.95□□□□□ -0.98
CDC42BPA-210ENST00000462553 DAGLBQ8NCG7 672 aa8.95□□□□□ -0.98
CDC42BPA-210ENST00000462553 BBXQ8WY36 941 aaPredicted RBP8.95□□□□□ -0.98
CDC42BPA-210ENST00000462553 MRPS27Q92552 414 aaKnown RBP8.95□□□□□ -0.98
CDC42BPA-210ENST00000462553 PBXIP1Q96AQ6 731 aa8.95□□□□□ -0.98
CDC42BPA-210ENST00000462553 RPGRIP1Q96KN7 1286 aa8.95□□□□□ -0.98
CDC42BPA-210ENST00000462553 ADAMTS10Q9H324 1103 aa8.95□□□□□ -0.98
CDC42BPA-210ENST00000462553 C6orf50Q9HD87 102 aa8.95□□□□□ -0.98
CDC42BPA-210ENST00000462553 AAASQ9NRG9 546 aa8.95□□□□□ -0.98
CDC42BPA-210ENST00000462553 GJB4Q9NTQ9 266 aa8.95□□□□□ -0.98
CDC42BPA-210ENST00000462553 PCDHB8Q9UN66 801 aa8.95□□□□□ -0.98
CDC42BPA-210ENST00000462553 MTCL1Q9Y4B5 1905 aaKnown RBP8.95□□□□□ -0.98
CDC42BPA-210ENST00000462553 DOCK6Q96HP0 2047 aa8.95□□□□□ -0.98
CDC42BPA-210ENST00000462553 FSD2A1L4K1 749 aa8.94□□□□□ -0.98
CDC42BPA-210ENST00000462553 ZNF862O60290 1169 aa8.94□□□□□ -0.98
CDC42BPA-210ENST00000462553 CDKL5O76039 1030 aa8.94□□□□□ -0.98
CDC42BPA-210ENST00000462553 GNA11P29992 359 aa8.94□□□□□ -0.98
CDC42BPA-210ENST00000462553 CIITAP33076 1130 aa8.94□□□□□ -0.98
CDC42BPA-210ENST00000462553 ZNF76P36508 570 aa8.94□□□□□ -0.98
CDC42BPA-210ENST00000462553 PTPN5P54829 565 aa8.94□□□□□ -0.98
CDC42BPA-210ENST00000462553 SETQ01105 290 aaPredicted RBP8.94□□□□□ -0.98
CDC42BPA-210ENST00000462553 UGCGQ16739 394 aa8.94□□□□□ -0.98
CDC42BPA-210ENST00000462553 PTPN21Q16825 1174 aa8.94□□□□□ -0.98
CDC42BPA-210ENST00000462553 PDE12Q6L8Q7 609 aaKnown RBP8.94□□□□□ -0.98
CDC42BPA-210ENST00000462553 ZNF598Q86UK7 904 aaKnown RBP8.94□□□□□ -0.98
CDC42BPA-210ENST00000462553 SMAP1Q8IYB5 467 aaPredicted RBP8.94□□□□□ -0.98
CDC42BPA-210ENST00000462553 FAM177A1Q8N128 213 aaPredicted RBP8.94□□□□□ -0.98
CDC42BPA-210ENST00000462553 LRRC43Q8N309 656 aa8.94□□□□□ -0.98
CDC42BPA-210ENST00000462553 LRRC71Q8N4P6 559 aa8.94□□□□□ -0.98
CDC42BPA-210ENST00000462553 TBC1D32Q96NH3 1257 aa8.94□□□□□ -0.98
CDC42BPA-210ENST00000462553 TCF25Q9BQ70 676 aa8.94□□□□□ -0.98
CDC42BPA-210ENST00000462553 ZNF577Q9BSK1 485 aa8.94□□□□□ -0.98
CDC42BPA-210ENST00000462553 PHF20Q9BVI0 1012 aa8.94□□□□□ -0.98
CDC42BPA-210ENST00000462553 TMEM117Q9H0C3 514 aa8.94□□□□□ -0.98
CDC42BPA-210ENST00000462553 ATP6V0A4Q9HBG4 840 aa8.94□□□□□ -0.98
CDC42BPA-210ENST00000462553 ORC3Q9UBD5 711 aaPredicted RBP8.94□□□□□ -0.98
CDC42BPA-210ENST00000462553 PCDHA4Q9UN74 947 aa8.94□□□□□ -0.98
CDC42BPA-210ENST00000462553 KCNJ14Q9UNX9 436 aa8.94□□□□□ -0.98
CDC42BPA-210ENST00000462553 GTF3C3Q9Y5Q9 886 aa8.94□□□□□ -0.98
CDC42BPA-210ENST00000462553 EP300Q09472 2414 aaPredicted RBP8.94□□□□□ -0.98
CDC42BPA-210ENST00000462553 CD2BP2O95400 341 aaKnown RBP8.93□□□□□ -0.98
CDC42BPA-210ENST00000462553 PDGFBP01127 241 aaPredicted RBP8.93□□□□□ -0.98
CDC42BPA-210ENST00000462553 TECP42680 631 aa8.93□□□□□ -0.98
CDC42BPA-210ENST00000462553 GPC3P51654 580 aa8.93□□□□□ -0.98
CDC42BPA-210ENST00000462553 NLRP11P59045 1033 aaKnown RBP8.93□□□□□ -0.98
CDC42BPA-210ENST00000462553 NLRP5P59047 1200 aa8.93□□□□□ -0.98
CDC42BPA-210ENST00000462553 PRKCEQ02156 737 aa8.93□□□□□ -0.98
CDC42BPA-210ENST00000462553 PRR16Q569H4 304 aa8.93□□□□□ -0.98
CDC42BPA-210ENST00000462553 ODR4Q5SWX8 454 aa8.93□□□□□ -0.98
CDC42BPA-210ENST00000462553 LLGL2Q6P1M3 1020 aa8.93□□□□□ -0.98
CDC42BPA-210ENST00000462553 KCNT2Q6UVM3 1135 aa8.93□□□□□ -0.98
CDC42BPA-210ENST00000462553 TRMT1LQ7Z2T5 733 aaKnown RBP8.93□□□□□ -0.98
CDC42BPA-210ENST00000462553 ECHDC2Q86YB7 292 aa8.93□□□□□ -0.98
CDC42BPA-210ENST00000462553 SUGP1Q8IWZ8 645 aaKnown RBP8.93□□□□□ -0.98
CDC42BPA-210ENST00000462553 BLIDQ8IZY5 108 aa8.93□□□□□ -0.98
CDC42BPA-210ENST00000462553 SLC39A11Q8N1S5 342 aa8.93□□□□□ -0.98
CDC42BPA-210ENST00000462553 METTL13Q8N6R0 699 aa8.93□□□□□ -0.98
CDC42BPA-210ENST00000462553 FEZF2Q8TBJ5 459 aa8.93□□□□□ -0.98
CDC42BPA-210ENST00000462553 BICD2Q8TD16 824 aa8.93□□□□□ -0.98
CDC42BPA-210ENST00000462553 MICAL1Q8TDZ2 1067 aa8.93□□□□□ -0.98
CDC42BPA-210ENST00000462553 ZNF668Q96K58 619 aaPredicted RBP8.93□□□□□ -0.98
CDC42BPA-210ENST00000462553 CEP89Q96ST8 783 aa8.93□□□□□ -0.98
CDC42BPA-210ENST00000462553 APOL5Q9BWW9 433 aa8.93□□□□□ -0.98
CDC42BPA-210ENST00000462553 ENTPD7Q9NQZ7 604 aa8.93□□□□□ -0.98
CDC42BPA-210ENST00000462553 TBC1D22BQ9NU19 505 aa8.93□□□□□ -0.98
CDC42BPA-210ENST00000462553 GABBR1Q9UBS5 961 aa8.93□□□□□ -0.98
CDC42BPA-210ENST00000462553 LIMCH1Q9UPQ0 1083 aa8.93□□□□□ -0.98
CDC42BPA-210ENST00000462553 PCDHA10Q9Y5I2 948 aa8.93□□□□□ -0.98
CDC42BPA-210ENST00000462553 FANCMQ8IYD8 2048 aa8.93□□□□□ -0.98
CDC42BPA-210ENST00000462553 MSH4O15457 936 aa8.92□□□□□ -0.98
CDC42BPA-210ENST00000462553 HOXA2O43364 376 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms