RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 MUTP22033 750 aa18.39■□□□□ 0.53
ACTB-207ENST00000462494 NPEPPSP55786 919 aa18.39■□□□□ 0.53
ACTB-207ENST00000462494 PPP2R5AQ15172 486 aa18.39■□□□□ 0.53
ACTB-207ENST00000462494 RSBN1LQ6PCB5 846 aaPredicted RBP18.39■□□□□ 0.53
ACTB-207ENST00000462494 PADI6Q6TGC4 694 aa18.39■□□□□ 0.53
ACTB-207ENST00000462494 TRMT1LQ7Z2T5 733 aaKnown RBP18.39■□□□□ 0.53
ACTB-207ENST00000462494 MIER3Q7Z3K6 550 aa18.39■□□□□ 0.53
ACTB-207ENST00000462494 SUPT20HQ8NEM7 779 aa18.39■□□□□ 0.53
ACTB-207ENST00000462494 OLIG1Q8TAK6 271 aa18.39■□□□□ 0.53
ACTB-207ENST00000462494 MXRA8Q9BRK3 442 aa18.39■□□□□ 0.53
ACTB-207ENST00000462494 CENPHQ9H3R5 247 aa18.39■□□□□ 0.53
ACTB-207ENST00000462494 TISP43B9A030 160 aa18.38■□□□□ 0.53
ACTB-207ENST00000462494 GUCY2CP25092 1073 aa18.38■□□□□ 0.53
ACTB-207ENST00000462494 PRPF4BQ13523 1007 aaKnown RBP18.38■□□□□ 0.53
ACTB-207ENST00000462494 CUL1Q13616 776 aa18.38■□□□□ 0.53
ACTB-207ENST00000462494 CEP85LQ5SZL2 805 aa18.38■□□□□ 0.53
ACTB-207ENST00000462494 PHLDB3Q6NSJ2 640 aa18.38■□□□□ 0.53
ACTB-207ENST00000462494 FAM160B2Q86V87 743 aa18.38■□□□□ 0.53
ACTB-207ENST00000462494 DAW1Q8N136 415 aa18.38■□□□□ 0.53
ACTB-207ENST00000462494 OGFOD1Q8N543 542 aa18.38■□□□□ 0.53
ACTB-207ENST00000462494 RFFLQ8WZ73 363 aa18.38■□□□□ 0.53
ACTB-207ENST00000462494 HES6Q96HZ4 224 aa18.38■□□□□ 0.53
ACTB-207ENST00000462494 TAS2R14Q9NYV8 317 aa18.38■□□□□ 0.53
ACTB-207ENST00000462494 CCPG1Q9ULG6 757 aa18.38■□□□□ 0.53
ACTB-207ENST00000462494 PPP1R9AQ9ULJ8 1098 aa18.38■□□□□ 0.53
ACTB-207ENST00000462494 SAMM50Q9Y512 469 aa18.38■□□□□ 0.53
ACTB-207ENST00000462494 ATP8B3O60423 1300 aa18.38■□□□□ 0.53
ACTB-207ENST00000462494 MYH11P35749 1972 aa18.38■□□□□ 0.53
ACTB-207ENST00000462494 CCDC188H7C350 402 aa18.38■□□□□ 0.53
ACTB-207ENST00000462494 TMEM253P0C7T8 217 aa18.38■□□□□ 0.53
ACTB-207ENST00000462494 CCDC172P0C7W6 258 aa18.38■□□□□ 0.53
ACTB-207ENST00000462494 KRT13P13646 458 aa18.38■□□□□ 0.53
ACTB-207ENST00000462494 ITGB5P18084 799 aa18.38■□□□□ 0.53
ACTB-207ENST00000462494 ECHS1P30084 290 aa18.38■□□□□ 0.53
ACTB-207ENST00000462494 HSPA9P38646 679 aaKnown RBP18.38■□□□□ 0.53
ACTB-207ENST00000462494 DLG4P78352 724 aa18.38■□□□□ 0.53
ACTB-207ENST00000462494 SKOR1P84550 965 aa18.38■□□□□ 0.53
ACTB-207ENST00000462494 MAPK7Q13164 816 aa18.38■□□□□ 0.53
ACTB-207ENST00000462494 GRIPAP1Q4V328 841 aa18.38■□□□□ 0.53
ACTB-207ENST00000462494 NAA35Q5VZE5 725 aa18.38■□□□□ 0.53
ACTB-207ENST00000462494 RASGEF1CQ8N431 466 aa18.38■□□□□ 0.53
ACTB-207ENST00000462494 SH2D3AQ9BRG2 576 aa18.38■□□□□ 0.53
ACTB-207ENST00000462494 FEM1BQ9UK73 627 aa18.38■□□□□ 0.53
ACTB-207ENST00000462494 CNTNAP1P78357 1384 aa18.37■□□□□ 0.53
ACTB-207ENST00000462494 FOXN3O00409 490 aaPredicted RBP18.37■□□□□ 0.53
ACTB-207ENST00000462494 ZEB2O60315 1214 aa18.37■□□□□ 0.53
ACTB-207ENST00000462494 FGGP02679 453 aa18.37■□□□□ 0.53
ACTB-207ENST00000462494 PALB2Q86YC2 1186 aa18.37■□□□□ 0.53
ACTB-207ENST00000462494 TEX2Q8IWB9 1127 aa18.37■□□□□ 0.53
ACTB-207ENST00000462494 ARHGEF26Q96DR7 871 aa18.37■□□□□ 0.53
ACTB-207ENST00000462494 CELF4Q9BZC1 486 aaKnown RBP18.37■□□□□ 0.53
ACTB-207ENST00000462494 THAP2Q9H0W7 228 aa18.37■□□□□ 0.53
ACTB-207ENST00000462494 NEUROG2Q9H2A3 272 aa18.37■□□□□ 0.53
ACTB-207ENST00000462494 KCNH7Q9NS40 1196 aa18.37■□□□□ 0.53
ACTB-207ENST00000462494 EMSYQ7Z589 1322 aa18.37■□□□□ 0.53
ACTB-207ENST00000462494 RBBP6Q7Z6E9 1792 aaKnown RBP18.37■□□□□ 0.53
ACTB-207ENST00000462494 TTI1O43156 1089 aa18.37■□□□□ 0.53
ACTB-207ENST00000462494 DAPK3O43293 454 aa18.37■□□□□ 0.53
ACTB-207ENST00000462494 HSD17B3P37058 310 aa18.37■□□□□ 0.53
ACTB-207ENST00000462494 B3GNT9Q6UX72 402 aa18.37■□□□□ 0.53
ACTB-207ENST00000462494 ADAT2Q7Z6V5 191 aaKnown RBP18.37■□□□□ 0.53
ACTB-207ENST00000462494 CD302Q8IX05 232 aa18.37■□□□□ 0.53
ACTB-207ENST00000462494 RIT2Q99578 217 aa18.37■□□□□ 0.53
ACTB-207ENST00000462494 UBE2TQ9NPD8 197 aaPredicted RBP18.37■□□□□ 0.53
ACTB-207ENST00000462494 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.37■□□□□ 0.536e-9■■■■■ 38.9
ACTB-207ENST00000462494 NCANO14594 1321 aa18.36■□□□□ 0.53
ACTB-207ENST00000462494 GOLGA6L10A6NI86 522 aa18.36■□□□□ 0.53
ACTB-207ENST00000462494 OR2W6PQ8NHA6 318 aa18.36■□□□□ 0.53
ACTB-207ENST00000462494 CCDC26Q8TAB7 109 aa18.36■□□□□ 0.53
ACTB-207ENST00000462494 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.36■□□□□ 0.533e-8■■■■■ 63.7
ACTB-207ENST00000462494 RNPC3Q96LT9 517 aaKnown RBP18.36■□□□□ 0.53
ACTB-207ENST00000462494 COL20A1Q9P218 1284 aa18.36■□□□□ 0.53
ACTB-207ENST00000462494 LARSQ9P2J5 1176 aaKnown RBP18.36■□□□□ 0.53
ACTB-207ENST00000462494 EBAG9O00559 213 aa18.35■□□□□ 0.53
ACTB-207ENST00000462494 NFIBO00712 420 aa18.35■□□□□ 0.53
ACTB-207ENST00000462494 PPP1R37O75864 691 aa18.35■□□□□ 0.53
ACTB-207ENST00000462494 CLSTN1O94985 981 aa18.35■□□□□ 0.53
ACTB-207ENST00000462494 NR1D1P20393 614 aa18.35■□□□□ 0.53
ACTB-207ENST00000462494 CAP2P40123 477 aa18.35■□□□□ 0.53
ACTB-207ENST00000462494 TBC1D10BQ4KMP7 808 aaPredicted RBP18.35■□□□□ 0.53
ACTB-207ENST00000462494 IL31RAQ8NI17 732 aa18.35■□□□□ 0.53
ACTB-207ENST00000462494 ATP6V1G3Q96LB4 118 aa18.35■□□□□ 0.53
ACTB-207ENST00000462494 SYT11Q9BT88 431 aa18.35■□□□□ 0.53
ACTB-207ENST00000462494 STRA6Q9BX79 667 aa18.35■□□□□ 0.53
ACTB-207ENST00000462494 DPH5Q9H2P9 285 aa18.35■□□□□ 0.53
ACTB-207ENST00000462494 BCRP11274 1271 aa18.35■□□□□ 0.53
ACTB-207ENST00000462494 GCLMP48507 274 aa18.35■□□□□ 0.53
ACTB-207ENST00000462494 GUCY1A3Q02108 690 aa18.35■□□□□ 0.53
ACTB-207ENST00000462494 TNIP1Q15025 636 aa18.35■□□□□ 0.53
ACTB-207ENST00000462494 SPDYE2Q495Y8 402 aa18.35■□□□□ 0.53
ACTB-207ENST00000462494 SLC9A9Q8IVB4 645 aa18.35■□□□□ 0.53
ACTB-207ENST00000462494 CPXCR1Q8N123 301 aa18.35■□□□□ 0.53
ACTB-207ENST00000462494 SLC20A1Q8WUM9 679 aa18.35■□□□□ 0.53
ACTB-207ENST00000462494 UBLCP1Q8WVY7 318 aaPredicted RBP18.35■□□□□ 0.53
ACTB-207ENST00000462494 LRRC45Q96CN5 670 aa18.35■□□□□ 0.53
ACTB-207ENST00000462494 CBWD1Q9BRT8 395 aa18.35■□□□□ 0.53
ACTB-207ENST00000462494 TRIM31Q9BZY9 425 aa18.35■□□□□ 0.53
ACTB-207ENST00000462494 HOMER2Q9NSB8 354 aa18.35■□□□□ 0.53
ACTB-207ENST00000462494 SCAF8Q9UPN6 1271 aaKnown RBP18.35■□□□□ 0.53
ACTB-207ENST00000462494 ZHX2Q9Y6X8 837 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms