RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 TMEM221A6NGB7 291 aa17.28■□□□□ 0.36
SKA3-204ENST00000462482 M0R296 226 aa17.28■□□□□ 0.36
SKA3-204ENST00000462482 MARCH6O60337 910 aa17.28■□□□□ 0.36
SKA3-204ENST00000462482 TDP2O95551 362 aa17.28■□□□□ 0.36
SKA3-204ENST00000462482 PSMC5P62195 406 aa17.28■□□□□ 0.36
SKA3-204ENST00000462482 STK3Q13188 491 aa17.28■□□□□ 0.36
SKA3-204ENST00000462482 TOB2Q14106 344 aaPredicted RBP17.28■□□□□ 0.36
SKA3-204ENST00000462482 TARBP2Q15633 366 aaKnown RBP17.28■□□□□ 0.36
SKA3-204ENST00000462482 CES5AQ6NT32 575 aa17.28■□□□□ 0.36
SKA3-204ENST00000462482 LRRC55Q6ZSA7 311 aa17.28■□□□□ 0.36
SKA3-204ENST00000462482 ZBTB33Q86T24 672 aa17.28■□□□□ 0.36
SKA3-204ENST00000462482 ZNF410Q86VK4 478 aa17.28■□□□□ 0.36
SKA3-204ENST00000462482 DAGLBQ8NCG7 672 aa17.28■□□□□ 0.36
SKA3-204ENST00000462482 GJA10Q969M2 543 aa17.28■□□□□ 0.36
SKA3-204ENST00000462482 FBXL18Q96ME1 805 aa17.28■□□□□ 0.36
SKA3-204ENST00000462482 RNF19AQ9NV58 838 aa17.28■□□□□ 0.36
SKA3-204ENST00000462482 SUCLA2Q9P2R7 463 aaPredicted RBP17.28■□□□□ 0.36
SKA3-204ENST00000462482 A0A087WZ62 844 aa17.27■□□□□ 0.36
SKA3-204ENST00000462482 CCDC194A0A1B0GVG4 234 aa17.27■□□□□ 0.36
SKA3-204ENST00000462482 HIDE1A8MVS5 230 aa17.27■□□□□ 0.36
SKA3-204ENST00000462482 CSDE1O75534 798 aaKnown RBP17.27■□□□□ 0.36
SKA3-204ENST00000462482 PBX3P40426 434 aa17.27■□□□□ 0.36
SKA3-204ENST00000462482 RAB27AP51159 221 aa17.27■□□□□ 0.36
SKA3-204ENST00000462482 ZXDAP98168 799 aa17.27■□□□□ 0.36
SKA3-204ENST00000462482 RBM10P98175 930 aaKnown RBP17.27■□□□□ 0.36
SKA3-204ENST00000462482 LETM2Q2VYF4 491 aa17.27■□□□□ 0.36
SKA3-204ENST00000462482 CLLU1OSQ5K130 101 aa17.27■□□□□ 0.36
SKA3-204ENST00000462482 GLB1LQ6UWU2 654 aa17.27■□□□□ 0.36
SKA3-204ENST00000462482 CATSPER4Q7RTX7 472 aa17.27■□□□□ 0.36
SKA3-204ENST00000462482 BMP8AQ7Z5Y6 402 aa17.27■□□□□ 0.36
SKA3-204ENST00000462482 RHPN2Q8IUC4 686 aa17.27■□□□□ 0.36
SKA3-204ENST00000462482 SLC39A11Q8N1S5 342 aa17.27■□□□□ 0.36
SKA3-204ENST00000462482 VN1R2Q8NFZ6 395 aa17.27■□□□□ 0.36
SKA3-204ENST00000462482 SLC7A3Q8WY07 619 aa17.27■□□□□ 0.36
SKA3-204ENST00000462482 SUSD6Q92537 303 aa17.27■□□□□ 0.36
SKA3-204ENST00000462482 NAP1L4Q99733 375 aaKnown RBP17.27■□□□□ 0.36
SKA3-204ENST00000462482 PRRX2Q99811 253 aa17.27■□□□□ 0.36
SKA3-204ENST00000462482 FDXACB1Q9BRP7 624 aaPredicted RBP17.27■□□□□ 0.36
SKA3-204ENST00000462482 TM6SF1Q9BZW5 370 aa17.27■□□□□ 0.36
SKA3-204ENST00000462482 PIN4Q9Y237 131 aaKnown RBP17.27■□□□□ 0.36
SKA3-204ENST00000462482 EDIL3O43854 480 aa17.26■□□□□ 0.35
SKA3-204ENST00000462482 MAFO75444 373 aaPredicted RBP17.26■□□□□ 0.35
SKA3-204ENST00000462482 PHKA2P46019 1235 aa17.26■□□□□ 0.35
SKA3-204ENST00000462482 BCAR1P56945 870 aa17.26■□□□□ 0.35
SKA3-204ENST00000462482 RNASELQ05823 741 aaKnown RBP17.26■□□□□ 0.35
SKA3-204ENST00000462482 ZNF598Q86UK7 904 aaKnown RBP17.26■□□□□ 0.35
SKA3-204ENST00000462482 MRPL43Q8N983 215 aaKnown RBP17.26■□□□□ 0.35
SKA3-204ENST00000462482 ETNPPLQ8TBG4 499 aa17.26■□□□□ 0.35
SKA3-204ENST00000462482 PGBD4Q96DM1 585 aa17.26■□□□□ 0.35
SKA3-204ENST00000462482 NLRP4Q96MN2 994 aa17.26■□□□□ 0.35
SKA3-204ENST00000462482 APOL5Q9BWW9 433 aa17.26■□□□□ 0.35
SKA3-204ENST00000462482 PDRG1Q9NUG6 133 aa17.26■□□□□ 0.35
SKA3-204ENST00000462482 NR2E1Q9Y466 385 aa17.26■□□□□ 0.35
SKA3-204ENST00000462482 IGKV6-21A0A0C4DH24 114 aa17.25■□□□□ 0.35
SKA3-204ENST00000462482 ZC3H11AO75152 810 aaKnown RBP eCLIP17.25■□□□□ 0.35
SKA3-204ENST00000462482 CXCL14O95715 111 aa17.25■□□□□ 0.35
SKA3-204ENST00000462482 GCFC2P16383 781 aaKnown RBP17.25■□□□□ 0.35
SKA3-204ENST00000462482 QARSP47897 775 aaKnown RBP17.25■□□□□ 0.35
SKA3-204ENST00000462482 NHLH1Q02575 133 aa17.25■□□□□ 0.35
SKA3-204ENST00000462482 ITIH3Q06033 890 aa17.25■□□□□ 0.35
SKA3-204ENST00000462482 SIGLEC14Q08ET2 396 aa17.25■□□□□ 0.35
SKA3-204ENST00000462482 DRP2Q13474 957 aa17.25■□□□□ 0.35
SKA3-204ENST00000462482 GIT2Q14161 759 aa17.25■□□□□ 0.35
SKA3-204ENST00000462482 INF2Q27J81 1249 aa17.25■□□□□ 0.35
SKA3-204ENST00000462482 FAM20AQ96MK3 541 aa17.25■□□□□ 0.35
SKA3-204ENST00000462482 MBOAT7Q96N66 472 aa17.25■□□□□ 0.35
SKA3-204ENST00000462482 NECTIN4Q96NY8 510 aa17.25■□□□□ 0.35
SKA3-204ENST00000462482 SH2D3AQ9BRG2 576 aa17.25■□□□□ 0.35
SKA3-204ENST00000462482 LARP6Q9BRS8 491 aaKnown RBP17.25■□□□□ 0.35
SKA3-204ENST00000462482 TRAIPQ9BWF2 469 aa17.25■□□□□ 0.35
SKA3-204ENST00000462482 S1PR5Q9H228 398 aa17.25■□□□□ 0.35
SKA3-204ENST00000462482 TSHZ2Q9NRE2 1034 aa17.25■□□□□ 0.35
SKA3-204ENST00000462482 PPME1Q9Y570 386 aa17.25■□□□□ 0.35
SKA3-204ENST00000462482 MYO7AQ13402 2215 aa17.25■□□□□ 0.35
SKA3-204ENST00000462482 TMEM150BA6NC51 233 aa17.24■□□□□ 0.35
SKA3-204ENST00000462482 POLGP54098 1239 aaPredicted RBP17.24■□□□□ 0.35
SKA3-204ENST00000462482 KCNC3Q14003 757 aa17.24■□□□□ 0.35
SKA3-204ENST00000462482 NOMO2Q5JPE7 1267 aa17.24■□□□□ 0.35
SKA3-204ENST00000462482 SYCE2Q6PIF2 218 aa17.24■□□□□ 0.35
SKA3-204ENST00000462482 B3GNT9Q6UX72 402 aa17.24■□□□□ 0.35
SKA3-204ENST00000462482 NEK8Q86SG6 692 aa17.24■□□□□ 0.35
SKA3-204ENST00000462482 URGCPQ8TCY9 931 aa17.24■□□□□ 0.35
SKA3-204ENST00000462482 RIPOR3Q96MK2 946 aa17.24■□□□□ 0.35
SKA3-204ENST00000462482 CYP26B1Q9NR63 512 aa17.24■□□□□ 0.35
SKA3-204ENST00000462482 FAM105AQ9NUU6 356 aa17.24■□□□□ 0.35
SKA3-204ENST00000462482 STK39Q9UEW8 545 aa17.24■□□□□ 0.35
SKA3-204ENST00000462482 INPP5FQ9Y2H2 1132 aa17.24■□□□□ 0.35
SKA3-204ENST00000462482 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.23■□□□□ 0.35
SKA3-204ENST00000462482 C2orf71A6NGG8 1288 aa17.23■□□□□ 0.35
SKA3-204ENST00000462482 NT5C1B-RDH14C9J2C7 533 aa17.23■□□□□ 0.35
SKA3-204ENST00000462482 M0R2N6 131 aa17.23■□□□□ 0.35
SKA3-204ENST00000462482 P4HBP07237 508 aaKnown RBP17.23■□□□□ 0.35
SKA3-204ENST00000462482 MTHFRP42898 656 aa17.23■□□□□ 0.35
SKA3-204ENST00000462482 MRE11P49959 708 aa17.23■□□□□ 0.35
SKA3-204ENST00000462482 PTPN21Q16825 1174 aa17.23■□□□□ 0.35
SKA3-204ENST00000462482 ANO5Q75V66 913 aa17.23■□□□□ 0.35
SKA3-204ENST00000462482 OTUD6AQ7L8S5 288 aa17.23■□□□□ 0.35
SKA3-204ENST00000462482 VPS52Q8N1B4 723 aa17.23■□□□□ 0.35
SKA3-204ENST00000462482 FBXL6Q8N531 539 aa17.23■□□□□ 0.35
SKA3-204ENST00000462482 PSPC1Q8WXF1 523 aaKnown RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms