RNA–Protein interactions for RNA: ENST00000462254.1

CSMD3-205, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 2

Gene CSMD3, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-205ENST00000462254 PAF1Q8N7H5 531 aa5.5□□□□□ -1.53
CSMD3-205ENST00000462254 MYRIPQ8NFW9 859 aa5.5□□□□□ -1.53
CSMD3-205ENST00000462254 LEO1Q8WVC0 666 aaPredicted RBP5.5□□□□□ -1.53
CSMD3-205ENST00000462254 VWCEQ96DN2 955 aa5.5□□□□□ -1.53
CSMD3-205ENST00000462254 MASTLQ96GX5 879 aa5.5□□□□□ -1.53
CSMD3-205ENST00000462254 KREMEN1Q96MU8 473 aa5.5□□□□□ -1.53
CSMD3-205ENST00000462254 RHOBTB2Q9BYZ6 727 aa5.5□□□□□ -1.53
CSMD3-205ENST00000462254 PPCSQ9HAB8 311 aa5.5□□□□□ -1.53
CSMD3-205ENST00000462254 PTPRHQ9HD43 1115 aa5.5□□□□□ -1.53
CSMD3-205ENST00000462254 ZNF69Q9UC07 566 aa5.5□□□□□ -1.53
CSMD3-205ENST00000462254 LZTS1Q9Y250 596 aa5.5□□□□□ -1.53
CSMD3-205ENST00000462254 ST14Q9Y5Y6 855 aa5.5□□□□□ -1.53
CSMD3-205ENST00000462254 COL1A1P02452 1464 aaPredicted RBP5.5□□□□□ -1.53
CSMD3-205ENST00000462254 MYH1P12882 1939 aa5.5□□□□□ -1.53
CSMD3-205ENST00000462254 NAV1Q8NEY1 1877 aa5.49□□□□□ -1.53
CSMD3-205ENST00000462254 TRBV23-1A0A0A0MS06 115 aa5.49□□□□□ -1.53
CSMD3-205ENST00000462254 H0YIN7 160 aa5.49□□□□□ -1.53
CSMD3-205ENST00000462254 AGRPO00253 132 aa5.49□□□□□ -1.53
CSMD3-205ENST00000462254 GABRDO14764 452 aa5.49□□□□□ -1.53
CSMD3-205ENST00000462254 CD8BP10966 210 aa5.49□□□□□ -1.53
CSMD3-205ENST00000462254 DPEP1P16444 411 aa5.49□□□□□ -1.53
CSMD3-205ENST00000462254 ZSCAN20P17040 1043 aaPredicted RBP5.49□□□□□ -1.53
CSMD3-205ENST00000462254 KLRK1P26718 216 aa5.49□□□□□ -1.53
CSMD3-205ENST00000462254 ALDH1B1P30837 517 aa5.49□□□□□ -1.53
CSMD3-205ENST00000462254 PHKA1P46020 1223 aa5.49□□□□□ -1.53
CSMD3-205ENST00000462254 GPSM2P81274 684 aa5.49□□□□□ -1.53
CSMD3-205ENST00000462254 PRKCQQ04759 706 aa5.49□□□□□ -1.53
CSMD3-205ENST00000462254 PUM3Q15397 648 aaKnown RBP5.49□□□□□ -1.53
CSMD3-205ENST00000462254 ZYXQ15942 572 aaKnown RBP5.49□□□□□ -1.53
CSMD3-205ENST00000462254 BMP2KLQ5H9B9 411 aa5.49□□□□□ -1.53
CSMD3-205ENST00000462254 STYK1Q6J9G0 422 aa5.49□□□□□ -1.53
CSMD3-205ENST00000462254 VSIG10LQ86VR7 867 aa5.49□□□□□ -1.53
CSMD3-205ENST00000462254 JPH3Q8WXH2 748 aaPredicted RBP5.49□□□□□ -1.53
CSMD3-205ENST00000462254 LPIN2Q92539 896 aa5.49□□□□□ -1.53
CSMD3-205ENST00000462254 ZNF622Q969S3 477 aaKnown RBP eCLIP5.49□□□□□ -1.53
CSMD3-205ENST00000462254 HRASLS5Q96KN8 279 aa5.49□□□□□ -1.53
CSMD3-205ENST00000462254 NEUROD6Q96NK8 337 aa5.49□□□□□ -1.53
CSMD3-205ENST00000462254 IPO9Q96P70 1041 aaKnown RBP5.49□□□□□ -1.53
CSMD3-205ENST00000462254 CDC6Q99741 560 aa5.49□□□□□ -1.53
CSMD3-205ENST00000462254 SARGQ9BW04 601 aa5.49□□□□□ -1.53
CSMD3-205ENST00000462254 PAK6Q9NQU5 681 aaPredicted RBP5.49□□□□□ -1.53
CSMD3-205ENST00000462254 ECHDC1Q9NTX5 307 aa5.49□□□□□ -1.53
CSMD3-205ENST00000462254 USP25Q9UHP3 1055 aa5.49□□□□□ -1.53
CSMD3-205ENST00000462254 TRHDEQ9UKU6 1024 aa5.49□□□□□ -1.53
CSMD3-205ENST00000462254 VAV3Q9UKW4 847 aa5.49□□□□□ -1.53
CSMD3-205ENST00000462254 ANGEL1Q9UNK9 670 aaKnown RBP5.49□□□□□ -1.53
CSMD3-205ENST00000462254 SLC5A6Q9Y289 635 aa5.49□□□□□ -1.53
CSMD3-205ENST00000462254 COL4A5P29400 1685 aa5.49□□□□□ -1.53
CSMD3-205ENST00000462254 XDHP47989 1333 aa5.48□□□□□ -1.53
CSMD3-205ENST00000462254 TRAV20A0A0B4J274 112 aa5.48□□□□□ -1.53
CSMD3-205ENST00000462254 A0A0G2JLW4 131 aa5.48□□□□□ -1.53
CSMD3-205ENST00000462254 VSTM5A8MXK1 200 aa5.48□□□□□ -1.53
CSMD3-205ENST00000462254 H3BS24 57 aa5.48□□□□□ -1.53
CSMD3-205ENST00000462254 TNFRSF10CO14798 259 aa5.48□□□□□ -1.53
CSMD3-205ENST00000462254 TCEA3O75764 348 aa5.48□□□□□ -1.53
CSMD3-205ENST00000462254 BBOX1O75936 387 aa5.48□□□□□ -1.53
CSMD3-205ENST00000462254 GLRX3O76003 335 aaKnown RBP5.48□□□□□ -1.53
CSMD3-205ENST00000462254 IFIT1P09914 478 aaKnown RBP5.48□□□□□ -1.53
CSMD3-205ENST00000462254 SLC5A1P13866 664 aa5.48□□□□□ -1.53
CSMD3-205ENST00000462254 ATP5JP18859 108 aa5.48□□□□□ -1.53
CSMD3-205ENST00000462254 MCAMP43121 646 aa5.48□□□□□ -1.53
CSMD3-205ENST00000462254 KIR3DL1P43629 444 aa5.48□□□□□ -1.53
CSMD3-205ENST00000462254 GP2P55259 537 aaKnown RBP5.48□□□□□ -1.53
CSMD3-205ENST00000462254 TRIM61Q5EBN2 209 aa5.48□□□□□ -1.53
CSMD3-205ENST00000462254 FAM209AQ5JX71 171 aa5.48□□□□□ -1.53
CSMD3-205ENST00000462254 FAM83BQ5T0W9 1011 aa5.48□□□□□ -1.53
CSMD3-205ENST00000462254 XP32Q5T750 250 aa5.48□□□□□ -1.53
CSMD3-205ENST00000462254 SYDE2Q5VT97 1194 aa5.48□□□□□ -1.53
CSMD3-205ENST00000462254 UNC5AQ6ZN44 842 aa5.48□□□□□ -1.53
CSMD3-205ENST00000462254 NBPF11Q86T75 865 aa5.48□□□□□ -1.53
CSMD3-205ENST00000462254 SCUBE1Q8IWY4 988 aa5.48□□□□□ -1.53
CSMD3-205ENST00000462254 SP8Q8IXZ3 490 aa5.48□□□□□ -1.53
CSMD3-205ENST00000462254 DTWD2Q8NBA8 298 aa5.48□□□□□ -1.53
CSMD3-205ENST00000462254 FLCNQ8NFG4 579 aa5.48□□□□□ -1.53
CSMD3-205ENST00000462254 NLGN2Q8NFZ4 835 aa5.48□□□□□ -1.53
CSMD3-205ENST00000462254 PJA1Q8NG27 643 aa5.48□□□□□ -1.53
CSMD3-205ENST00000462254 RNF141Q8WVD5 230 aa5.48□□□□□ -1.53
CSMD3-205ENST00000462254 EDC3Q96F86 508 aaKnown RBP5.48□□□□□ -1.53
CSMD3-205ENST00000462254 GPR101Q96P66 508 aaPredicted RBP5.48□□□□□ -1.53
CSMD3-205ENST00000462254 TRIM8Q9BZR9 551 aa5.48□□□□□ -1.53
CSMD3-205ENST00000462254 ANKRD2Q9GZV1 360 aa5.48□□□□□ -1.53
CSMD3-205ENST00000462254 TMX4Q9H1E5 349 aaPredicted RBP5.48□□□□□ -1.53
CSMD3-205ENST00000462254 BOLA2Q9H3K6 86 aa5.48□□□□□ -1.53
CSMD3-205ENST00000462254 SPON1Q9HCB6 807 aa5.48□□□□□ -1.53
CSMD3-205ENST00000462254 ATP13A1Q9HD20 1204 aa5.48□□□□□ -1.53
CSMD3-205ENST00000462254 LUC7LQ9NQ29 371 aaKnown RBP5.48□□□□□ -1.53
CSMD3-205ENST00000462254 ARHGEF4Q9NR80 690 aa5.48□□□□□ -1.53
CSMD3-205ENST00000462254 SEMA3GQ9NS98 782 aa5.48□□□□□ -1.53
CSMD3-205ENST00000462254 ATP6V0A2Q9Y487 856 aa5.48□□□□□ -1.53
CSMD3-205ENST00000462254 SNX11Q9Y5W9 270 aa5.48□□□□□ -1.53
CSMD3-205ENST00000462254 OAS3Q9Y6K5 1087 aaKnown RBP5.48□□□□□ -1.53
CSMD3-205ENST00000462254 DDX60LQ5H9U9 1706 aaKnown RBP5.48□□□□□ -1.53
CSMD3-205ENST00000462254 ZNF804BA4D1E1 1349 aa5.48□□□□□ -1.53
CSMD3-205ENST00000462254 PITPNM2Q9BZ72 1349 aa5.48□□□□□ -1.53
CSMD3-205ENST00000462254 LTBP3Q9NS15 1303 aa5.48□□□□□ -1.53
CSMD3-205ENST00000462254 POLR2AP24928 1970 aaKnown RBP5.47□□□□□ -1.53
CSMD3-205ENST00000462254 MED23Q9ULK4 1368 aa5.47□□□□□ -1.53
CSMD3-205ENST00000462254 ANO9A1A5B4 782 aa5.47□□□□□ -1.53
CSMD3-205ENST00000462254 CFAP69A5D8W1 941 aa5.47□□□□□ -1.53
CSMD3-205ENST00000462254 ERC2O15083 957 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms