RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 GRID2IPA4D2P6 1211 aa13.59□□□□□ -0.23
COL4A6-204ENST00000461897 A6NNZ2 444 aa13.59□□□□□ -0.23
COL4A6-204ENST00000461897 RSPH10B2B2RC85 870 aa13.59□□□□□ -0.23
COL4A6-204ENST00000461897 CCNE2O96020 404 aa13.59□□□□□ -0.23
COL4A6-204ENST00000461897 RSPH10BP0C881 870 aa13.59□□□□□ -0.23
COL4A6-204ENST00000461897 CORO7P57737 925 aa13.59□□□□□ -0.23
COL4A6-204ENST00000461897 CNTN2Q02246 1040 aa13.59□□□□□ -0.23
COL4A6-204ENST00000461897 PPFIA1Q13136 1202 aa13.59□□□□□ -0.23
COL4A6-204ENST00000461897 TUBB8Q3ZCM7 444 aa13.59□□□□□ -0.23
COL4A6-204ENST00000461897 SLC9C1Q4G0N8 1177 aa13.59□□□□□ -0.23
COL4A6-204ENST00000461897 HERC4Q5GLZ8 1057 aaPredicted RBP13.59□□□□□ -0.23
COL4A6-204ENST00000461897 ANKRD35Q8N283 1001 aa13.59□□□□□ -0.23
COL4A6-204ENST00000461897 HDAC7Q8WUI4 952 aa13.59□□□□□ -0.23
COL4A6-204ENST00000461897 RIN2Q8WYP3 895 aaPredicted RBP13.59□□□□□ -0.23
COL4A6-204ENST00000461897 RRAGCQ9HB90 399 aa13.59□□□□□ -0.23
COL4A6-204ENST00000461897 LUC7LQ9NQ29 371 aaKnown RBP13.59□□□□□ -0.23
COL4A6-204ENST00000461897 GDF3Q9NR23 364 aa13.59□□□□□ -0.23
COL4A6-204ENST00000461897 FBXO40Q9UH90 709 aa13.59□□□□□ -0.23
COL4A6-204ENST00000461897 PCDHGC5Q9Y5F6 944 aa13.59□□□□□ -0.23
COL4A6-204ENST00000461897 PFASO15067 1338 aa13.58□□□□□ -0.23
COL4A6-204ENST00000461897 GOLGA6CA6NDK9 693 aa13.58□□□□□ -0.24
COL4A6-204ENST00000461897 UNCXA6NJT0 531 aa13.58□□□□□ -0.24
COL4A6-204ENST00000461897 BTNL10A8MVZ5 291 aa13.58□□□□□ -0.24
COL4A6-204ENST00000461897 OPA1O60313 960 aa13.58□□□□□ -0.24
COL4A6-204ENST00000461897 TLR2O60603 784 aa13.58□□□□□ -0.24
COL4A6-204ENST00000461897 GOLGA6DP0CG33 693 aa13.58□□□□□ -0.24
COL4A6-204ENST00000461897 SNAPC2Q13487 334 aa13.58□□□□□ -0.24
COL4A6-204ENST00000461897 NAB2Q15742 525 aa13.58□□□□□ -0.24
COL4A6-204ENST00000461897 C1orf186Q6ZWK4 172 aa13.58□□□□□ -0.24
COL4A6-204ENST00000461897 SND1Q7KZF4 910 aaKnown RBP eCLIP13.58□□□□□ -0.24
COL4A6-204ENST00000461897 CACNA2D4Q7Z3S7 1137 aa13.58□□□□□ -0.24
COL4A6-204ENST00000461897 NCAPG2Q86XI2 1143 aa13.58□□□□□ -0.24
COL4A6-204ENST00000461897 SFR1Q86XK3 245 aa13.58□□□□□ -0.24
COL4A6-204ENST00000461897 TRIM59Q8IWR1 403 aa13.58□□□□□ -0.24
COL4A6-204ENST00000461897 DNERQ8NFT8 737 aa13.58□□□□□ -0.24
COL4A6-204ENST00000461897 SLC10A4Q96EP9 437 aa13.58□□□□□ -0.24
COL4A6-204ENST00000461897 NACC1Q96RE7 527 aa13.58□□□□□ -0.24
COL4A6-204ENST00000461897 BCAS3Q9H6U6 928 aa13.58□□□□□ -0.24
COL4A6-204ENST00000461897 GOLGA6AQ9NYA3 693 aa13.58□□□□□ -0.24
COL4A6-204ENST00000461897 AIPL1Q9NZN9 384 aa13.58□□□□□ -0.24
COL4A6-204ENST00000461897 RBPJLQ9UBG7 517 aa13.58□□□□□ -0.24
COL4A6-204ENST00000461897 ATP8B3O60423 1300 aa13.58□□□□□ -0.24
COL4A6-204ENST00000461897 CES2O00748 559 aa13.57□□□□□ -0.24
COL4A6-204ENST00000461897 TRIM66O15016 1216 aa13.57□□□□□ -0.24
COL4A6-204ENST00000461897 MAFGO15525 162 aa13.57□□□□□ -0.24
COL4A6-204ENST00000461897 P4HBP07237 508 aaKnown RBP13.57□□□□□ -0.24
COL4A6-204ENST00000461897 KCNA2P16389 499 aa13.57□□□□□ -0.24
COL4A6-204ENST00000461897 MAGEA9P43362 315 aa13.57□□□□□ -0.24
COL4A6-204ENST00000461897 CASP5P51878 434 aa13.57□□□□□ -0.24
COL4A6-204ENST00000461897 SKOR1P84550 965 aa13.57□□□□□ -0.24
COL4A6-204ENST00000461897 GFPT1Q06210 699 aaPredicted RBP13.57□□□□□ -0.24
COL4A6-204ENST00000461897 FSTL1Q12841 308 aa13.57□□□□□ -0.24
COL4A6-204ENST00000461897 UGCGQ16739 394 aa13.57□□□□□ -0.24
COL4A6-204ENST00000461897 CFAP221Q4G0U5 840 aa13.57□□□□□ -0.24
COL4A6-204ENST00000461897 CCDC181Q5TID7 509 aa13.57□□□□□ -0.24
COL4A6-204ENST00000461897 SFMBT2Q5VUG0 894 aa13.57□□□□□ -0.24
COL4A6-204ENST00000461897 PPP4R3CPQ6ZMV5 832 aa13.57□□□□□ -0.24
COL4A6-204ENST00000461897 NLRX1Q86UT6 975 aa13.57□□□□□ -0.24
COL4A6-204ENST00000461897 MREGQ8N565 214 aa13.57□□□□□ -0.24
COL4A6-204ENST00000461897 C1orf131Q8NDD1 294 aaKnown RBP13.57□□□□□ -0.24
COL4A6-204ENST00000461897 SCFD1Q8WVM8 642 aa13.57□□□□□ -0.24
COL4A6-204ENST00000461897 ZHX3Q9H4I2 956 aa13.57□□□□□ -0.24
COL4A6-204ENST00000461897 SAMM50Q9Y512 469 aa13.57□□□□□ -0.24
COL4A6-204ENST00000461897 STAM2O75886 525 aa13.57□□□□□ -0.24
COL4A6-204ENST00000461897 ERCC3P19447 782 aa13.57□□□□□ -0.24
COL4A6-204ENST00000461897 ALDH5A1P51649 535 aaPredicted RBP13.57□□□□□ -0.24
COL4A6-204ENST00000461897 KRT76Q01546 638 aa13.57□□□□□ -0.24
COL4A6-204ENST00000461897 APBA1Q02410 837 aa13.57□□□□□ -0.24
COL4A6-204ENST00000461897 SLC18A3Q16572 532 aa13.57□□□□□ -0.24
COL4A6-204ENST00000461897 EDRF1Q3B7T1 1238 aa13.57□□□□□ -0.24
COL4A6-204ENST00000461897 EMC10Q5UCC4 262 aa13.57□□□□□ -0.24
COL4A6-204ENST00000461897 EIF1ADQ8N9N8 165 aaKnown RBP13.57□□□□□ -0.24
COL4A6-204ENST00000461897 IWS1Q96ST2 819 aa13.57□□□□□ -0.24
COL4A6-204ENST00000461897 POLD4Q9HCU8 107 aa13.57□□□□□ -0.24
COL4A6-204ENST00000461897 WDR64B1ANS9 1081 aa13.56□□□□□ -0.24
COL4A6-204ENST00000461897 TBCAO75347 108 aaKnown RBP13.56□□□□□ -0.24
COL4A6-204ENST00000461897 OSBPP22059 807 aa13.56□□□□□ -0.24
COL4A6-204ENST00000461897 QARSP47897 775 aaKnown RBP13.56□□□□□ -0.24
COL4A6-204ENST00000461897 IRAK1P51617 712 aa13.56□□□□□ -0.24
COL4A6-204ENST00000461897 JAK3P52333 1124 aa13.56□□□□□ -0.24
COL4A6-204ENST00000461897 Q3C1V9 767 aa13.56□□□□□ -0.24
COL4A6-204ENST00000461897 DNAJC21Q5F1R6 531 aaKnown RBP13.56□□□□□ -0.24
COL4A6-204ENST00000461897 C8orf74Q6P047 294 aa13.56□□□□□ -0.24
COL4A6-204ENST00000461897 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.56□□□□□ -0.24
COL4A6-204ENST00000461897 EPM2AIP1Q7L775 607 aaPredicted RBP13.56□□□□□ -0.24
COL4A6-204ENST00000461897 CD302Q8IX05 232 aa13.56□□□□□ -0.24
COL4A6-204ENST00000461897 FAM133AQ8N9E0 248 aa13.56□□□□□ -0.24
COL4A6-204ENST00000461897 MS4A4AQ96JQ5 239 aa13.56□□□□□ -0.24
COL4A6-204ENST00000461897 GDAP1L1Q96MZ0 367 aa13.56□□□□□ -0.24
COL4A6-204ENST00000461897 FAM107BQ9H098 131 aa13.56□□□□□ -0.24
COL4A6-204ENST00000461897 KCTD10Q9H3F6 313 aa13.56□□□□□ -0.24
COL4A6-204ENST00000461897 GBA2Q9HCG7 927 aaPredicted RBP13.56□□□□□ -0.24
COL4A6-204ENST00000461897 RBM12Q9NTZ6 932 aaKnown RBP13.56□□□□□ -0.24
COL4A6-204ENST00000461897 SOWAHBA6NEL2 793 aa13.55□□□□□ -0.24
COL4A6-204ENST00000461897 SPATA31C2B4DYI2 1134 aa13.55□□□□□ -0.24
COL4A6-204ENST00000461897 LYPLA2O95372 231 aa13.55□□□□□ -0.24
COL4A6-204ENST00000461897 SLC25A27O95847 323 aa13.55□□□□□ -0.24
COL4A6-204ENST00000461897 EDNRBP24530 442 aa13.55□□□□□ -0.24
COL4A6-204ENST00000461897 SFNP31947 248 aa13.55□□□□□ -0.24
COL4A6-204ENST00000461897 FKBP1BP68106 108 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms