RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 IKBKBO14920 756 aa16.77■□□□□ 0.28
TMEM39A-203ENST00000461654 DGAT1O75907 488 aa16.77■□□□□ 0.28
TMEM39A-203ENST00000461654 RFC2P35250 354 aa16.77■□□□□ 0.28
TMEM39A-203ENST00000461654 MYL5Q02045 173 aa16.77■□□□□ 0.28
TMEM39A-203ENST00000461654 IQCB1Q15051 598 aa16.77■□□□□ 0.28
TMEM39A-203ENST00000461654 TPD52L1Q16890 204 aaPredicted RBP16.77■□□□□ 0.28
TMEM39A-203ENST00000461654 MTERF2Q49AM1 385 aa16.77■□□□□ 0.28
TMEM39A-203ENST00000461654 STXBP4Q6ZWJ1 553 aa16.77■□□□□ 0.28
TMEM39A-203ENST00000461654 EXOC8Q8IYI6 725 aa16.77■□□□□ 0.28
TMEM39A-203ENST00000461654 SMYD4Q8IYR2 804 aaPredicted RBP16.77■□□□□ 0.28
TMEM39A-203ENST00000461654 MYCT1Q8N699 235 aa16.77■□□□□ 0.28
TMEM39A-203ENST00000461654 MCPH1Q8NEM0 835 aa16.77■□□□□ 0.28
TMEM39A-203ENST00000461654 BBXQ8WY36 941 aaPredicted RBP16.77■□□□□ 0.28
TMEM39A-203ENST00000461654 DHTKD1Q96HY7 919 aaPredicted RBP16.77■□□□□ 0.28
TMEM39A-203ENST00000461654 CTAGE1Q96RT6 745 aa16.77■□□□□ 0.28
TMEM39A-203ENST00000461654 PCYT2Q99447 389 aa16.77■□□□□ 0.28
TMEM39A-203ENST00000461654 NIFKQ9BYG3 293 aaKnown RBP16.77■□□□□ 0.28
TMEM39A-203ENST00000461654 MTIF3Q9H2K0 278 aaKnown RBP16.77■□□□□ 0.28
TMEM39A-203ENST00000461654 PARVGQ9HBI0 331 aa16.77■□□□□ 0.28
TMEM39A-203ENST00000461654 SLC39A2Q9NP94 309 aa16.77■□□□□ 0.28
TMEM39A-203ENST00000461654 CYP26B1Q9NR63 512 aa16.77■□□□□ 0.28
TMEM39A-203ENST00000461654 ERAP1Q9NZ08 941 aa16.77■□□□□ 0.28
TMEM39A-203ENST00000461654 LARSQ9P2J5 1176 aaKnown RBP16.77■□□□□ 0.28
TMEM39A-203ENST00000461654 GDAQ9Y2T3 454 aa16.77■□□□□ 0.28
TMEM39A-203ENST00000461654 BICDL2A1A5D9 508 aa16.76■□□□□ 0.27
TMEM39A-203ENST00000461654 PPP1R3GB7ZBB8 358 aa16.76■□□□□ 0.27
TMEM39A-203ENST00000461654 STBD1O95210 358 aa16.76■□□□□ 0.27
TMEM39A-203ENST00000461654 RFC5P40937 340 aa16.76■□□□□ 0.27
TMEM39A-203ENST00000461654 PRCPP42785 496 aa16.76■□□□□ 0.27
TMEM39A-203ENST00000461654 PSEN2P49810 448 aa16.76■□□□□ 0.27
TMEM39A-203ENST00000461654 POLGP54098 1239 aaPredicted RBP16.76■□□□□ 0.27
TMEM39A-203ENST00000461654 NPEPPSP55786 919 aa16.76■□□□□ 0.27
TMEM39A-203ENST00000461654 RBL2Q08999 1139 aa16.76■□□□□ 0.27
TMEM39A-203ENST00000461654 STK4Q13043 487 aa16.76■□□□□ 0.27
TMEM39A-203ENST00000461654 PAK1Q13153 545 aa16.76■□□□□ 0.27
TMEM39A-203ENST00000461654 BFSP2Q13515 415 aa16.76■□□□□ 0.27
TMEM39A-203ENST00000461654 PTGISQ16647 500 aa16.76■□□□□ 0.27
TMEM39A-203ENST00000461654 COBLL1Q53SF7 1204 aa16.76■□□□□ 0.27
TMEM39A-203ENST00000461654 ADSSL1Q8N142 457 aa16.76■□□□□ 0.27
TMEM39A-203ENST00000461654 ATP8B4Q8TF62 1192 aa16.76■□□□□ 0.27
TMEM39A-203ENST00000461654 C16orf70Q9BSU1 422 aa16.76■□□□□ 0.27
TMEM39A-203ENST00000461654 TTYH1Q9H313 450 aaPredicted RBP16.76■□□□□ 0.27
TMEM39A-203ENST00000461654 ATP6V0A4Q9HBG4 840 aa16.76■□□□□ 0.27
TMEM39A-203ENST00000461654 GTF2IRD1Q9UHL9 959 aa16.76■□□□□ 0.27
TMEM39A-203ENST00000461654 KCNG1Q9UIX4 513 aa16.76■□□□□ 0.27
TMEM39A-203ENST00000461654 RWDD2AQ9UIY3 292 aa16.76■□□□□ 0.27
TMEM39A-203ENST00000461654 CTNND2Q9UQB3 1225 aa16.76■□□□□ 0.27
TMEM39A-203ENST00000461654 TRPC6Q9Y210 931 aa16.76■□□□□ 0.27
TMEM39A-203ENST00000461654 LOXHD1Q8IVV2 1947 aa16.75■□□□□ 0.27
TMEM39A-203ENST00000461654 TMEM150BA6NC51 233 aa16.75■□□□□ 0.27
TMEM39A-203ENST00000461654 HIP1RO75146 1068 aa16.75■□□□□ 0.27
TMEM39A-203ENST00000461654 LGALS2P05162 132 aa16.75■□□□□ 0.27
TMEM39A-203ENST00000461654 IQCF3P0C7M6 154 aa16.75■□□□□ 0.27
TMEM39A-203ENST00000461654 FAM102BQ5T8I3 360 aa16.75■□□□□ 0.27
TMEM39A-203ENST00000461654 GDF6Q6KF10 455 aaPredicted RBP16.75■□□□□ 0.27
TMEM39A-203ENST00000461654 SFR1Q86XK3 245 aa16.75■□□□□ 0.27
TMEM39A-203ENST00000461654 DHX40Q8IX18 779 aaKnown RBP16.75■□□□□ 0.27
TMEM39A-203ENST00000461654 MYOCDQ8IZQ8 938 aa16.75■□□□□ 0.27
TMEM39A-203ENST00000461654 GUF1Q8N442 669 aaKnown RBP16.75■□□□□ 0.27
TMEM39A-203ENST00000461654 C7orf31Q8N865 590 aa16.75■□□□□ 0.27
TMEM39A-203ENST00000461654 RETREG2Q8NC44 543 aa16.75■□□□□ 0.27
TMEM39A-203ENST00000461654 CAGE1Q8TC20 777 aa16.75■□□□□ 0.27
TMEM39A-203ENST00000461654 ENOX1Q8TC92 643 aaKnown RBP16.75■□□□□ 0.27
TMEM39A-203ENST00000461654 NELFBQ8WX92 580 aa16.75■□□□□ 0.27
TMEM39A-203ENST00000461654 SLC7A3Q8WY07 619 aa16.75■□□□□ 0.27
TMEM39A-203ENST00000461654 KIFAP3Q92845 792 aa16.75■□□□□ 0.27
TMEM39A-203ENST00000461654 SCLYQ96I15 445 aa16.75■□□□□ 0.27
TMEM39A-203ENST00000461654 JPH2Q9BR39 696 aaPredicted RBP16.75■□□□□ 0.27
TMEM39A-203ENST00000461654 MRPL44Q9H9J2 332 aaKnown RBP16.75■□□□□ 0.27
TMEM39A-203ENST00000461654 OLFML3Q9NRN5 406 aa16.75■□□□□ 0.27
TMEM39A-203ENST00000461654 HDAC6Q9UBN7 1215 aa16.75■□□□□ 0.27
TMEM39A-203ENST00000461654 MAPK8IP1Q9UQF2 711 aa16.75■□□□□ 0.27
TMEM39A-203ENST00000461654 NOD1Q9Y239 953 aa16.75■□□□□ 0.27
TMEM39A-203ENST00000461654 RSPH10B2B2RC85 870 aa16.74■□□□□ 0.27
TMEM39A-203ENST00000461654 HBP1O60381 514 aa16.74■□□□□ 0.27
TMEM39A-203ENST00000461654 RSPH10BP0C881 870 aa16.74■□□□□ 0.27
TMEM39A-203ENST00000461654 CD44P16070 742 aaKnown RBP16.74■□□□□ 0.27
TMEM39A-203ENST00000461654 ATP4AP20648 1035 aa16.74■□□□□ 0.27
TMEM39A-203ENST00000461654 DNAJB2P25686 324 aa16.74■□□□□ 0.27
TMEM39A-203ENST00000461654 MARK3P27448 753 aa16.74■□□□□ 0.27
TMEM39A-203ENST00000461654 ZNF131P52739 623 aa16.74■□□□□ 0.27
TMEM39A-203ENST00000461654 PLCB2Q00722 1185 aa16.74■□□□□ 0.27
TMEM39A-203ENST00000461654 EHHADHQ08426 723 aa16.74■□□□□ 0.27
TMEM39A-203ENST00000461654 MFSD10Q14728 455 aa16.74■□□□□ 0.27
TMEM39A-203ENST00000461654 PLCB4Q15147 1175 aa16.74■□□□□ 0.27
TMEM39A-203ENST00000461654 KIAA0753Q2KHM9 967 aa16.74■□□□□ 0.27
TMEM39A-203ENST00000461654 ODR4Q5SWX8 454 aa16.74■□□□□ 0.27
TMEM39A-203ENST00000461654 MAEAQ7L5Y9 396 aa16.74■□□□□ 0.27
TMEM39A-203ENST00000461654 FAM178BQ8IXR5 827 aa16.74■□□□□ 0.27
TMEM39A-203ENST00000461654 SLC17A8Q8NDX2 589 aa16.74■□□□□ 0.27
TMEM39A-203ENST00000461654 PPP1R13LQ8WUF5 828 aa16.74■□□□□ 0.27
TMEM39A-203ENST00000461654 HPS3Q969F9 1004 aa16.74■□□□□ 0.27
TMEM39A-203ENST00000461654 CDX2Q99626 313 aaPredicted RBP16.74■□□□□ 0.27
TMEM39A-203ENST00000461654 TSG101Q99816 390 aa16.74■□□□□ 0.27
TMEM39A-203ENST00000461654 SH2D3AQ9BRG2 576 aa16.74■□□□□ 0.27
TMEM39A-203ENST00000461654 TBC1D7Q9P0N9 293 aa16.74■□□□□ 0.27
TMEM39A-203ENST00000461654 CXXC1Q9P0U4 656 aaPredicted RBP16.74■□□□□ 0.27
TMEM39A-203ENST00000461654 DOCK5Q9H7D0 1870 aa16.73■□□□□ 0.27
TMEM39A-203ENST00000461654 SFI1A8K8P3 1242 aa16.73■□□□□ 0.27
TMEM39A-203ENST00000461654 PARNO95453 639 aaKnown RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms