RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 TPH2Q8IWU9 490 aa17.36■□□□□ 0.37
NUP50-213ENST00000461437 NEK9Q8TD19 979 aa17.36■□□□□ 0.37
NUP50-213ENST00000461437 HELQQ8TDG4 1101 aa17.36■□□□□ 0.37
NUP50-213ENST00000461437 GCOM2Q9BZD3 368 aaPredicted RBP17.36■□□□□ 0.37
NUP50-213ENST00000461437 POTEMA6NI47 508 aa17.35■□□□□ 0.37
NUP50-213ENST00000461437 MEIS3P2A8K0S8 358 aa17.35■□□□□ 0.37
NUP50-213ENST00000461437 TBX10O75333 385 aa17.35■□□□□ 0.37
NUP50-213ENST00000461437 BAG4O95429 457 aaKnown RBP17.35■□□□□ 0.37
NUP50-213ENST00000461437 DNM2P50570 870 aa17.35■□□□□ 0.37
NUP50-213ENST00000461437 POLGP54098 1239 aaPredicted RBP17.35■□□□□ 0.37
NUP50-213ENST00000461437 RBM10P98175 930 aaKnown RBP17.35■□□□□ 0.37
NUP50-213ENST00000461437 XKR9Q5GH70 373 aa17.35■□□□□ 0.37
NUP50-213ENST00000461437 SLFN12Q8IYM2 578 aa17.35■□□□□ 0.37
NUP50-213ENST00000461437 THNSL1Q8IYQ7 743 aa17.35■□□□□ 0.37
NUP50-213ENST00000461437 NAP1L4Q99733 375 aaKnown RBP17.35■□□□□ 0.37
NUP50-213ENST00000461437 EIF2AK1Q9BQI3 630 aaKnown RBP17.35■□□□□ 0.37
NUP50-213ENST00000461437 ELAC1Q9H777 363 aaKnown RBP17.35■□□□□ 0.37
NUP50-213ENST00000461437 TTC12Q9H892 705 aaPredicted RBP17.35■□□□□ 0.37
NUP50-213ENST00000461437 RAPGEFL1Q9UHV5 662 aa17.35■□□□□ 0.37
NUP50-213ENST00000461437 PIN4Q9Y237 131 aaKnown RBP17.35■□□□□ 0.37
NUP50-213ENST00000461437 PER2O15055 1255 aa17.34■□□□□ 0.37
NUP50-213ENST00000461437 NEMFO60524 1076 aa17.34■□□□□ 0.37
NUP50-213ENST00000461437 FGF18O76093 207 aa17.34■□□□□ 0.37
NUP50-213ENST00000461437 SLITRK3O94933 977 aa17.34■□□□□ 0.37
NUP50-213ENST00000461437 SRGAP2CP0DJJ0 459 aa17.34■□□□□ 0.37
NUP50-213ENST00000461437 MCM7P33993 719 aa17.34■□□□□ 0.37
NUP50-213ENST00000461437 NRIP1P48552 1158 aa17.34■□□□□ 0.37
NUP50-213ENST00000461437 ERVFC1P60507 584 aa17.34■□□□□ 0.37
NUP50-213ENST00000461437 COL19A1Q14993 1142 aa17.34■□□□□ 0.37
NUP50-213ENST00000461437 EMC2Q15006 297 aa17.34■□□□□ 0.37
NUP50-213ENST00000461437 ZNF598Q86UK7 904 aaKnown RBP17.34■□□□□ 0.37
NUP50-213ENST00000461437 C4orf19Q8IY42 314 aa17.34■□□□□ 0.37
NUP50-213ENST00000461437 PRPF31Q8WWY3 499 aaKnown RBP17.34■□□□□ 0.37
NUP50-213ENST00000461437 C8orf76Q96K31 380 aa17.34■□□□□ 0.37
NUP50-213ENST00000461437 TMEM117Q9H0C3 514 aa17.34■□□□□ 0.37
NUP50-213ENST00000461437 EPHX3Q9H6B9 360 aa17.34■□□□□ 0.37
NUP50-213ENST00000461437 DHX33Q9H6R0 707 aaKnown RBP17.34■□□□□ 0.37
NUP50-213ENST00000461437 MINDY3Q9H8M7 445 aa17.34■□□□□ 0.37
NUP50-213ENST00000461437 IFT122Q9HBG6 1241 aa17.34■□□□□ 0.37
NUP50-213ENST00000461437 PCDHA12Q9UN75 941 aa17.34■□□□□ 0.37
NUP50-213ENST00000461437 PCDHB12Q9Y5F1 795 aa17.34■□□□□ 0.37
NUP50-213ENST00000461437 COL4A3BPQ9Y5P4 624 aa17.34■□□□□ 0.37
NUP50-213ENST00000461437 GRXCR2A6NFK2 248 aa17.33■□□□□ 0.36
NUP50-213ENST00000461437 NT5C1B-RDH14C9J2C7 533 aa17.33■□□□□ 0.36
NUP50-213ENST00000461437 NBR1Q14596 966 aa17.33■□□□□ 0.36
NUP50-213ENST00000461437 ZNF174Q15697 407 aa17.33■□□□□ 0.36
NUP50-213ENST00000461437 CTC1Q2NKJ3 1217 aa17.33■□□□□ 0.36
NUP50-213ENST00000461437 TWF2Q6IBS0 349 aaKnown RBP17.33■□□□□ 0.36
NUP50-213ENST00000461437 CATSPER4Q7RTX7 472 aa17.33■□□□□ 0.36
NUP50-213ENST00000461437 ZNF410Q86VK4 478 aa17.33■□□□□ 0.36
NUP50-213ENST00000461437 ABI1Q8IZP0 508 aa17.33■□□□□ 0.36
NUP50-213ENST00000461437 MICAL1Q8TDZ2 1067 aa17.33■□□□□ 0.36
NUP50-213ENST00000461437 SLC7A3Q8WY07 619 aa17.33■□□□□ 0.36
NUP50-213ENST00000461437 ZSWIM4Q9H7M6 989 aa17.33■□□□□ 0.36
NUP50-213ENST00000461437 XPNPEP1Q9NQW7 623 aa17.33■□□□□ 0.36
NUP50-213ENST00000461437 A0A0U1RQF3 1178 aa17.32■□□□□ 0.36
NUP50-213ENST00000461437 DKC1O60832 514 aaKnown RBP eCLIP17.32■□□□□ 0.36
NUP50-213ENST00000461437 EIF5BO60841 1220 aaKnown RBP17.32■□□□□ 0.36
NUP50-213ENST00000461437 SFPQP23246 707 aaKnown RBP eCLIP17.32■□□□□ 0.36
NUP50-213ENST00000461437 PHKA2P46019 1235 aa17.32■□□□□ 0.36
NUP50-213ENST00000461437 LAMTOR4Q0VGL1 99 aa17.32■□□□□ 0.36
NUP50-213ENST00000461437 NAALADL2Q58DX5 795 aa17.32■□□□□ 0.36
NUP50-213ENST00000461437 PLPP4Q5VZY2 271 aa17.32■□□□□ 0.36
NUP50-213ENST00000461437 FAM178BQ8IXR5 827 aa17.32■□□□□ 0.36
NUP50-213ENST00000461437 PIGOQ8TEQ8 1089 aa17.32■□□□□ 0.36
NUP50-213ENST00000461437 MTMR9Q96QG7 549 aa17.32■□□□□ 0.36
NUP50-213ENST00000461437 TDRD15B5MCY1 1934 aaKnown RBP17.31■□□□□ 0.36
NUP50-213ENST00000461437 GLP2RO95838 553 aa17.31■□□□□ 0.36
NUP50-213ENST00000461437 LAG3P18627 525 aa17.31■□□□□ 0.36
NUP50-213ENST00000461437 RFC5P40937 340 aa17.31■□□□□ 0.36
NUP50-213ENST00000461437 NDUFV1P49821 464 aa17.31■□□□□ 0.36
NUP50-213ENST00000461437 ADAM15Q13444 863 aa17.31■□□□□ 0.36
NUP50-213ENST00000461437 KCNT2Q6UVM3 1135 aa17.31■□□□□ 0.36
NUP50-213ENST00000461437 LRRC43Q8N309 656 aa17.31■□□□□ 0.36
NUP50-213ENST00000461437 ASAP3Q8TDY4 903 aa17.31■□□□□ 0.36
NUP50-213ENST00000461437 PSPC1Q8WXF1 523 aaKnown RBP17.31■□□□□ 0.36
NUP50-213ENST00000461437 MTRQ99707 1265 aa17.31■□□□□ 0.36
NUP50-213ENST00000461437 HSD17B14Q9BPX1 270 aa17.31■□□□□ 0.36
NUP50-213ENST00000461437 TLR9Q9NR96 1032 aa17.31■□□□□ 0.36
NUP50-213ENST00000461437 AAASQ9NRG9 546 aa17.31■□□□□ 0.36
NUP50-213ENST00000461437 BARX2Q9UMQ3 279 aaPredicted RBP17.31■□□□□ 0.36
NUP50-213ENST00000461437 INPP5FQ9Y2H2 1132 aa17.31■□□□□ 0.36
NUP50-213ENST00000461437 CD2BP2O95400 341 aaKnown RBP17.3■□□□□ 0.36
NUP50-213ENST00000461437 SSTR3P32745 418 aaPredicted RBP17.3■□□□□ 0.36
NUP50-213ENST00000461437 SAFBQ15424 915 aaKnown RBP eCLIP17.3■□□□□ 0.36
NUP50-213ENST00000461437 MAEAQ7L5Y9 396 aa17.3■□□□□ 0.36
NUP50-213ENST00000461437 OTUD6AQ7L8S5 288 aa17.3■□□□□ 0.36
NUP50-213ENST00000461437 FERMT3Q86UX7 667 aa17.3■□□□□ 0.36
NUP50-213ENST00000461437 TMEM173Q86WV6 379 aaPredicted RBP17.3■□□□□ 0.36
NUP50-213ENST00000461437 ZNF710Q8N1W2 664 aa17.3■□□□□ 0.36
NUP50-213ENST00000461437 RNF149Q8NC42 400 aa17.3■□□□□ 0.36
NUP50-213ENST00000461437 VN1R2Q8NFZ6 395 aa17.3■□□□□ 0.36
NUP50-213ENST00000461437 JPH2Q9BR39 696 aaPredicted RBP17.3■□□□□ 0.36
NUP50-213ENST00000461437 LLPHQ9BRT6 129 aaKnown RBP17.3■□□□□ 0.36
NUP50-213ENST00000461437 FAM105AQ9NUU6 356 aa17.3■□□□□ 0.36
NUP50-213ENST00000461437 RNF216Q9NWF9 866 aaPredicted RBP17.3■□□□□ 0.36
NUP50-213ENST00000461437 DACT1Q9NYF0 836 aa17.3■□□□□ 0.36
NUP50-213ENST00000461437 CLEC1BQ9P126 229 aa17.3■□□□□ 0.36
NUP50-213ENST00000461437 FAM86C2PA6NEL3 165 aa17.29■□□□□ 0.36
NUP50-213ENST00000461437 HOXA2O43364 376 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms