RNA–Protein interactions for RNA: ENST00000461187.5

SMPD4-216, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 659 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-216ENST00000461187 SH2D3AQ9BRG2 576 aa16.54■□□□□ 0.24
SMPD4-216ENST00000461187 PHF7Q9BWX1 381 aaPredicted RBP16.54■□□□□ 0.24
SMPD4-216ENST00000461187 ENTPD7Q9NQZ7 604 aa16.54■□□□□ 0.24
SMPD4-216ENST00000461187 DENND4AQ7Z401 1863 aa16.54■□□□□ 0.24
SMPD4-216ENST00000461187 HIDE1A8MVS5 230 aa16.53■□□□□ 0.24
SMPD4-216ENST00000461187 PPM1AP35813 382 aa16.53■□□□□ 0.24
SMPD4-216ENST00000461187 STK3Q13188 491 aa16.53■□□□□ 0.24
SMPD4-216ENST00000461187 GALNT17Q6IS24 598 aa16.53■□□□□ 0.24
SMPD4-216ENST00000461187 HELQQ8TDG4 1101 aa16.53■□□□□ 0.24
SMPD4-216ENST00000461187 GCOM2Q9BZD3 368 aaPredicted RBP16.53■□□□□ 0.24
SMPD4-216ENST00000461187 S1PR5Q9H228 398 aa16.53■□□□□ 0.24
SMPD4-216ENST00000461187 NGRNQ9NPE2 291 aaKnown RBP16.53■□□□□ 0.24
SMPD4-216ENST00000461187 DACT1Q9NYF0 836 aa16.53■□□□□ 0.24
SMPD4-216ENST00000461187 SPG21Q9NZD8 308 aa16.53■□□□□ 0.24
SMPD4-216ENST00000461187 A0A087WZ62 844 aa16.52■□□□□ 0.24
SMPD4-216ENST00000461187 SLC37A4O43826 429 aa16.52■□□□□ 0.24
SMPD4-216ENST00000461187 CDC42EP1Q00587 391 aa16.52■□□□□ 0.24
SMPD4-216ENST00000461187 KRT17Q04695 432 aa16.52■□□□□ 0.24
SMPD4-216ENST00000461187 NONOQ15233 471 aaKnown RBP eCLIP16.52■□□□□ 0.24
SMPD4-216ENST00000461187 INF2Q27J81 1249 aa16.52■□□□□ 0.24
SMPD4-216ENST00000461187 ANKRD54Q6NXT1 300 aa16.52■□□□□ 0.24
SMPD4-216ENST00000461187 SYCE2Q6PIF2 218 aa16.52■□□□□ 0.24
SMPD4-216ENST00000461187 SLC39A11Q8N1S5 342 aa16.52■□□□□ 0.24
SMPD4-216ENST00000461187 FDXACB1Q9BRP7 624 aaPredicted RBP16.52■□□□□ 0.24
SMPD4-216ENST00000461187 KCNH6Q9H252 994 aa16.52■□□□□ 0.24
SMPD4-216ENST00000461187 CHST12Q9NRB3 414 aa16.52■□□□□ 0.24
SMPD4-216ENST00000461187 DDX25Q9UHL0 483 aaKnown RBP16.52■□□□□ 0.24
SMPD4-216ENST00000461187 KCNJ14Q9UNX9 436 aa16.52■□□□□ 0.24
SMPD4-216ENST00000461187 DDX11L8A8MPP1 907 aa16.51■□□□□ 0.23
SMPD4-216ENST00000461187 EML1O00423 815 aa16.51■□□□□ 0.23
SMPD4-216ENST00000461187 MAFO75444 373 aaPredicted RBP16.51■□□□□ 0.23
SMPD4-216ENST00000461187 TECP42680 631 aa16.51■□□□□ 0.23
SMPD4-216ENST00000461187 DNM2P50570 870 aa16.51■□□□□ 0.23
SMPD4-216ENST00000461187 PSMC5P62195 406 aa16.51■□□□□ 0.23
SMPD4-216ENST00000461187 LLGL2Q6P1M3 1020 aa16.51■□□□□ 0.23
SMPD4-216ENST00000461187 CPLX2Q6PUV4 134 aaKnown RBP16.51■□□□□ 0.23
SMPD4-216ENST00000461187 ANO5Q75V66 913 aa16.51■□□□□ 0.23
SMPD4-216ENST00000461187 KRT25Q7Z3Z0 450 aa16.51■□□□□ 0.23
SMPD4-216ENST00000461187 TMC7Q7Z402 723 aa16.51■□□□□ 0.23
SMPD4-216ENST00000461187 RPGRIP1Q96KN7 1286 aa16.51■□□□□ 0.23
SMPD4-216ENST00000461187 MFSD14AQ96MC6 490 aa16.51■□□□□ 0.23
SMPD4-216ENST00000461187 FBXL18Q96ME1 805 aa16.51■□□□□ 0.23
SMPD4-216ENST00000461187 TRAIPQ9BWF2 469 aa16.51■□□□□ 0.23
SMPD4-216ENST00000461187 SUCLA2Q9P2R7 463 aaPredicted RBP16.51■□□□□ 0.23
SMPD4-216ENST00000461187 PLXNA3P51805 1871 aa16.5■□□□□ 0.23
SMPD4-216ENST00000461187 SRGAP2BP0DMP2 458 aa16.5■□□□□ 0.23
SMPD4-216ENST00000461187 PHKA2P46019 1235 aa16.5■□□□□ 0.23
SMPD4-216ENST00000461187 BCAR1P56945 870 aa16.5■□□□□ 0.23
SMPD4-216ENST00000461187 ZXDAP98168 799 aa16.5■□□□□ 0.23
SMPD4-216ENST00000461187 PPP2R5CQ13362 524 aa16.5■□□□□ 0.23
SMPD4-216ENST00000461187 LETM2Q2VYF4 491 aa16.5■□□□□ 0.23
SMPD4-216ENST00000461187 PLA2G4FQ68DD2 849 aa16.5■□□□□ 0.23
SMPD4-216ENST00000461187 TRIM67Q6ZTA4 783 aa16.5■□□□□ 0.23
SMPD4-216ENST00000461187 BMP8AQ7Z5Y6 402 aa16.5■□□□□ 0.23
SMPD4-216ENST00000461187 ZNF410Q86VK4 478 aa16.5■□□□□ 0.23
SMPD4-216ENST00000461187 RHPN2Q8IUC4 686 aa16.5■□□□□ 0.23
SMPD4-216ENST00000461187 KSR1Q8IVT5 923 aa16.5■□□□□ 0.23
SMPD4-216ENST00000461187 PHF20Q9BVI0 1012 aa16.5■□□□□ 0.23
SMPD4-216ENST00000461187 MRPL9Q9BYD2 267 aaKnown RBP16.5■□□□□ 0.23
SMPD4-216ENST00000461187 PDRG1Q9NUG6 133 aa16.5■□□□□ 0.23
SMPD4-216ENST00000461187 VAV3Q9UKW4 847 aa16.5■□□□□ 0.23
SMPD4-216ENST00000461187 TRIP11Q15643 1979 aa16.49■□□□□ 0.23
SMPD4-216ENST00000461187 TMEM221A6NGB7 291 aa16.49■□□□□ 0.23
SMPD4-216ENST00000461187 C2orf71A6NGG8 1288 aa16.49■□□□□ 0.23
SMPD4-216ENST00000461187 NT5C1B-RDH14C9J2C7 533 aa16.49■□□□□ 0.23
SMPD4-216ENST00000461187 M0R296 226 aa16.49■□□□□ 0.23
SMPD4-216ENST00000461187 SFPQP23246 707 aaKnown RBP eCLIP16.49■□□□□ 0.23
SMPD4-216ENST00000461187 SCRN1Q12765 414 aa16.49■□□□□ 0.23
SMPD4-216ENST00000461187 SMC1AQ14683 1233 aaKnown RBP16.49■□□□□ 0.23
SMPD4-216ENST00000461187 TWF2Q6IBS0 349 aaKnown RBP16.49■□□□□ 0.23
SMPD4-216ENST00000461187 MRPL43Q8N983 215 aaKnown RBP16.49■□□□□ 0.23
SMPD4-216ENST00000461187 LPPQ93052 612 aa16.49■□□□□ 0.23
SMPD4-216ENST00000461187 FAM20AQ96MK3 541 aa16.49■□□□□ 0.23
SMPD4-216ENST00000461187 APOL5Q9BWW9 433 aa16.49■□□□□ 0.23
SMPD4-216ENST00000461187 INO80BQ9C086 356 aaPredicted RBP16.49■□□□□ 0.23
SMPD4-216ENST00000461187 KCNMB3Q9NPA1 279 aa16.49■□□□□ 0.23
SMPD4-216ENST00000461187 CACNA1HO95180 2353 aa16.49■□□□□ 0.23
SMPD4-216ENST00000461187 CCDC194A0A1B0GVG4 234 aa16.48■□□□□ 0.23
SMPD4-216ENST00000461187 MEIS3P2A8K0S8 358 aa16.48■□□□□ 0.23
SMPD4-216ENST00000461187 HOXB8P17481 243 aaPredicted RBP16.48■□□□□ 0.23
SMPD4-216ENST00000461187 QARSP47897 775 aaKnown RBP16.48■□□□□ 0.23
SMPD4-216ENST00000461187 ALDH7A1P49419 539 aaKnown RBP16.48■□□□□ 0.23
SMPD4-216ENST00000461187 NPEPPSP55786 919 aa16.48■□□□□ 0.23
SMPD4-216ENST00000461187 NHLH1Q02575 133 aa16.48■□□□□ 0.23
SMPD4-216ENST00000461187 LONRF3Q496Y0 759 aa16.48■□□□□ 0.23
SMPD4-216ENST00000461187 PPP4R3AQ6IN85 833 aa16.48■□□□□ 0.23
SMPD4-216ENST00000461187 NEK8Q86SG6 692 aa16.48■□□□□ 0.23
SMPD4-216ENST00000461187 ALYREFQ86V81 257 aaKnown RBP16.48■□□□□ 0.23
SMPD4-216ENST00000461187 ZNF579Q8NAF0 562 aaKnown RBP16.48■□□□□ 0.23
SMPD4-216ENST00000461187 RSPH1Q8WYR4 309 aa16.48■□□□□ 0.23
SMPD4-216ENST00000461187 CASP10Q92851 521 aa16.48■□□□□ 0.23
SMPD4-216ENST00000461187 NLRP4Q96MN2 994 aa16.48■□□□□ 0.23
SMPD4-216ENST00000461187 JPH2Q9BR39 696 aaPredicted RBP16.48■□□□□ 0.23
SMPD4-216ENST00000461187 IFT122Q9HBG6 1241 aa16.48■□□□□ 0.23
SMPD4-216ENST00000461187 CYP26B1Q9NR63 512 aa16.48■□□□□ 0.23
SMPD4-216ENST00000461187 GJB4Q9NTQ9 266 aa16.48■□□□□ 0.23
SMPD4-216ENST00000461187 FAM105AQ9NUU6 356 aa16.48■□□□□ 0.23
SMPD4-216ENST00000461187 WRAP73Q9P2S5 460 aaPredicted RBP16.48■□□□□ 0.23
SMPD4-216ENST00000461187 PIN4Q9Y237 131 aaKnown RBP16.48■□□□□ 0.23
SMPD4-216ENST00000461187 HCFC2Q9Y5Z7 792 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms