RNA–Protein interactions for RNA: ENST00000461063.6

SOX2-OT-202, SOX2 overlapping transcript, humanhuman

TSL 3 BASIC

Gene SOX2-OT, Length 566 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-202ENST00000461063 RDM1Q8NG50 284 aa9.9□□□□□ -0.82
SOX2-OT-202ENST00000461063 ETNPPLQ8TBG4 499 aa9.9□□□□□ -0.82
SOX2-OT-202ENST00000461063 MICAL1Q8TDZ2 1067 aa9.9□□□□□ -0.82
SOX2-OT-202ENST00000461063 AIFM3Q96NN9 605 aa9.9□□□□□ -0.82
SOX2-OT-202ENST00000461063 CASD1Q96PB1 797 aa9.9□□□□□ -0.82
SOX2-OT-202ENST00000461063 CEP89Q96ST8 783 aa9.9□□□□□ -0.82
SOX2-OT-202ENST00000461063 NIFKQ9BYG3 293 aaKnown RBP9.9□□□□□ -0.82
SOX2-OT-202ENST00000461063 TLE6Q9H808 572 aa9.9□□□□□ -0.82
SOX2-OT-202ENST00000461063 TLR9Q9NR96 1032 aa9.9□□□□□ -0.82
SOX2-OT-202ENST00000461063 IGKV6-21A0A0C4DH24 114 aa9.89□□□□□ -0.83
SOX2-OT-202ENST00000461063 TMEM150BA6NC51 233 aa9.89□□□□□ -0.83
SOX2-OT-202ENST00000461063 FSCN2O14926 492 aa9.89□□□□□ -0.83
SOX2-OT-202ENST00000461063 HOXA2O43364 376 aa9.89□□□□□ -0.83
SOX2-OT-202ENST00000461063 CSDE1O75534 798 aaKnown RBP9.89□□□□□ -0.83
SOX2-OT-202ENST00000461063 LAG3P18627 525 aa9.89□□□□□ -0.83
SOX2-OT-202ENST00000461063 FGFR4P22455 802 aa9.89□□□□□ -0.83
SOX2-OT-202ENST00000461063 RBM10P98175 930 aaKnown RBP9.89□□□□□ -0.83
SOX2-OT-202ENST00000461063 PLCB3Q01970 1234 aa9.89□□□□□ -0.83
SOX2-OT-202ENST00000461063 NONOQ15233 471 aaKnown RBP eCLIP9.89□□□□□ -0.83
SOX2-OT-202ENST00000461063 MTERF2Q49AM1 385 aa9.89□□□□□ -0.83
SOX2-OT-202ENST00000461063 GALNT17Q6IS24 598 aa9.89□□□□□ -0.83
SOX2-OT-202ENST00000461063 PDE12Q6L8Q7 609 aaKnown RBP9.89□□□□□ -0.83
SOX2-OT-202ENST00000461063 CPLX2Q6PUV4 134 aaKnown RBP9.89□□□□□ -0.83
SOX2-OT-202ENST00000461063 MOXD1Q6UVY6 613 aa9.89□□□□□ -0.83
SOX2-OT-202ENST00000461063 VN1R2Q8NFZ6 395 aa9.89□□□□□ -0.83
SOX2-OT-202ENST00000461063 NLRP7Q8WX94 980 aa9.89□□□□□ -0.83
SOX2-OT-202ENST00000461063 SCLT1Q96NL6 688 aa9.89□□□□□ -0.83
SOX2-OT-202ENST00000461063 SH2D3AQ9BRG2 576 aa9.89□□□□□ -0.83
SOX2-OT-202ENST00000461063 PDRG1Q9NUG6 133 aa9.89□□□□□ -0.83
SOX2-OT-202ENST00000461063 SEPT9Q9UHD8 586 aaPredicted RBP9.89□□□□□ -0.83
SOX2-OT-202ENST00000461063 DDX25Q9UHL0 483 aaKnown RBP9.89□□□□□ -0.83
SOX2-OT-202ENST00000461063 BARX2Q9UMQ3 279 aaPredicted RBP9.89□□□□□ -0.83
SOX2-OT-202ENST00000461063 KCNJ14Q9UNX9 436 aa9.89□□□□□ -0.83
SOX2-OT-202ENST00000461063 LZTS1Q9Y250 596 aa9.89□□□□□ -0.83
SOX2-OT-202ENST00000461063 KIAA1671Q9BY89 1806 aa9.89□□□□□ -0.83
SOX2-OT-202ENST00000461063 A0A0U1RQF3 1178 aa9.88□□□□□ -0.83
SOX2-OT-202ENST00000461063 DDX11L8A8MPP1 907 aa9.88□□□□□ -0.83
SOX2-OT-202ENST00000461063 SLC37A4O43826 429 aa9.88□□□□□ -0.83
SOX2-OT-202ENST00000461063 PBX3P40426 434 aa9.88□□□□□ -0.83
SOX2-OT-202ENST00000461063 CDC42EP1Q00587 391 aa9.88□□□□□ -0.83
SOX2-OT-202ENST00000461063 DUSP6Q16828 381 aa9.88□□□□□ -0.83
SOX2-OT-202ENST00000461063 INF2Q27J81 1249 aa9.88□□□□□ -0.83
SOX2-OT-202ENST00000461063 HERC4Q5GLZ8 1057 aaPredicted RBP9.88□□□□□ -0.83
SOX2-OT-202ENST00000461063 CLLU1OSQ5K130 101 aa9.88□□□□□ -0.83
SOX2-OT-202ENST00000461063 KCNT2Q6UVM3 1135 aa9.88□□□□□ -0.83
SOX2-OT-202ENST00000461063 ANO5Q75V66 913 aa9.88□□□□□ -0.83
SOX2-OT-202ENST00000461063 KRT25Q7Z3Z0 450 aa9.88□□□□□ -0.83
SOX2-OT-202ENST00000461063 ZNF598Q86UK7 904 aaKnown RBP9.88□□□□□ -0.83
SOX2-OT-202ENST00000461063 RNF135Q8IUD6 432 aa9.88□□□□□ -0.83
SOX2-OT-202ENST00000461063 ABI1Q8IZP0 508 aa9.88□□□□□ -0.83
SOX2-OT-202ENST00000461063 LRRC43Q8N309 656 aa9.88□□□□□ -0.83
SOX2-OT-202ENST00000461063 RNF169Q8NCN4 708 aa9.88□□□□□ -0.83
SOX2-OT-202ENST00000461063 MRPS27Q92552 414 aaKnown RBP9.88□□□□□ -0.83
SOX2-OT-202ENST00000461063 CDCA3Q99618 268 aaPredicted RBP9.88□□□□□ -0.83
SOX2-OT-202ENST00000461063 PHF20Q9BVI0 1012 aa9.88□□□□□ -0.83
SOX2-OT-202ENST00000461063 GCOM2Q9BZD3 368 aaPredicted RBP9.88□□□□□ -0.83
SOX2-OT-202ENST00000461063 PUF60Q9UHX1 559 aaKnown RBP9.88□□□□□ -0.83
SOX2-OT-202ENST00000461063 MUTYHQ9UIF7 546 aa9.88□□□□□ -0.83
SOX2-OT-202ENST00000461063 USP15Q9Y4E8 981 aaPredicted RBP9.88□□□□□ -0.83
SOX2-OT-202ENST00000461063 LOXHD1Q8IVV2 1947 aa9.88□□□□□ -0.83
SOX2-OT-202ENST00000461063 WDFY4Q6ZS81 3184 aa9.87□□□□□ -0.83
SOX2-OT-202ENST00000461063 A0A087WZ62 844 aa9.87□□□□□ -0.83
SOX2-OT-202ENST00000461063 FSD2A1L4K1 749 aa9.87□□□□□ -0.83
SOX2-OT-202ENST00000461063 HIDE1A8MVS5 230 aa9.87□□□□□ -0.83
SOX2-OT-202ENST00000461063 LOC730098B7Z3J9 87 aa9.87□□□□□ -0.83
SOX2-OT-202ENST00000461063 EML1O00423 815 aa9.87□□□□□ -0.83
SOX2-OT-202ENST00000461063 DTNBO60941 627 aa9.87□□□□□ -0.83
SOX2-OT-202ENST00000461063 MAFO75444 373 aaPredicted RBP9.87□□□□□ -0.83
SOX2-OT-202ENST00000461063 CDKL5O76039 1030 aa9.87□□□□□ -0.83
SOX2-OT-202ENST00000461063 EOMESO95936 686 aa9.87□□□□□ -0.83
SOX2-OT-202ENST00000461063 ATF7P17544 494 aaPredicted RBP9.87□□□□□ -0.83
SOX2-OT-202ENST00000461063 PPM1AP35813 382 aa9.87□□□□□ -0.83
SOX2-OT-202ENST00000461063 DNM2P50570 870 aa9.87□□□□□ -0.83
SOX2-OT-202ENST00000461063 PSMC5P62195 406 aa9.87□□□□□ -0.83
SOX2-OT-202ENST00000461063 SCRN1Q12765 414 aa9.87□□□□□ -0.83
SOX2-OT-202ENST00000461063 KCNC3Q14003 757 aa9.87□□□□□ -0.83
SOX2-OT-202ENST00000461063 LETM2Q2VYF4 491 aa9.87□□□□□ -0.83
SOX2-OT-202ENST00000461063 PLPP4Q5VZY2 271 aa9.87□□□□□ -0.83
SOX2-OT-202ENST00000461063 PPP4R3AQ6IN85 833 aa9.87□□□□□ -0.83
SOX2-OT-202ENST00000461063 TMEM184AQ6ZMB5 413 aa9.87□□□□□ -0.83
SOX2-OT-202ENST00000461063 HELQQ8TDG4 1101 aa9.87□□□□□ -0.83
SOX2-OT-202ENST00000461063 ZNF558Q96NG5 402 aa9.87□□□□□ -0.83
SOX2-OT-202ENST00000461063 TCF25Q9BQ70 676 aa9.87□□□□□ -0.83
SOX2-OT-202ENST00000461063 FDXACB1Q9BRP7 624 aaPredicted RBP9.87□□□□□ -0.83
SOX2-OT-202ENST00000461063 TRAIPQ9BWF2 469 aa9.87□□□□□ -0.83
SOX2-OT-202ENST00000461063 KCNMB3Q9NPA1 279 aa9.87□□□□□ -0.83
SOX2-OT-202ENST00000461063 NGRNQ9NPE2 291 aaKnown RBP9.87□□□□□ -0.83
SOX2-OT-202ENST00000461063 CHST12Q9NRB3 414 aa9.87□□□□□ -0.83
SOX2-OT-202ENST00000461063 GJB4Q9NTQ9 266 aa9.87□□□□□ -0.83
SOX2-OT-202ENST00000461063 DACT1Q9NYF0 836 aa9.87□□□□□ -0.83
SOX2-OT-202ENST00000461063 SPG21Q9NZD8 308 aa9.87□□□□□ -0.83
SOX2-OT-202ENST00000461063 SUCLA2Q9P2R7 463 aaPredicted RBP9.87□□□□□ -0.83
SOX2-OT-202ENST00000461063 VAV3Q9UKW4 847 aa9.87□□□□□ -0.83
SOX2-OT-202ENST00000461063 STK36Q9NRP7 1315 aa9.86□□□□□ -0.83
SOX2-OT-202ENST00000461063 CCDC194A0A1B0GVG4 234 aa9.86□□□□□ -0.83
SOX2-OT-202ENST00000461063 FAM205CA6NFA0 338 aa9.86□□□□□ -0.83
SOX2-OT-202ENST00000461063 PFKFB2O60825 505 aa9.86□□□□□ -0.83
SOX2-OT-202ENST00000461063 SFPQP23246 707 aaKnown RBP eCLIP9.86□□□□□ -0.83
SOX2-OT-202ENST00000461063 PHKA2P46019 1235 aa9.86□□□□□ -0.83
SOX2-OT-202ENST00000461063 KRT17Q04695 432 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms