RNA–Protein interactions for RNA: ENST00000460790.1

CSDC2-202, Transcript of cold shock domain containing C2, humanhuman

TSL 3

Gene CSDC2, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-202ENST00000460790 MXD4Q14582 209 aaPredicted RBP12.01□□□□□ -0.49
CSDC2-202ENST00000460790 PPP2R5AQ15172 486 aa12.01□□□□□ -0.49
CSDC2-202ENST00000460790 CXCL17Q6UXB2 119 aa12.01□□□□□ -0.49
CSDC2-202ENST00000460790 CTU1Q7Z7A3 348 aaKnown RBP12.01□□□□□ -0.49
CSDC2-202ENST00000460790 RNF180Q86T96 592 aa12.01□□□□□ -0.49
CSDC2-202ENST00000460790 METTL13Q8N6R0 699 aa12.01□□□□□ -0.49
CSDC2-202ENST00000460790 TMEM161BQ8NDZ6 487 aa12.01□□□□□ -0.49
CSDC2-202ENST00000460790 PRPF31Q8WWY3 499 aaKnown RBP12.01□□□□□ -0.49
CSDC2-202ENST00000460790 DUSP9Q99956 384 aaKnown RBP12.01□□□□□ -0.49
CSDC2-202ENST00000460790 KMT5AQ9NQR1 393 aa12.01□□□□□ -0.49
CSDC2-202ENST00000460790 SUCLA2Q9P2R7 463 aaPredicted RBP12.01□□□□□ -0.49
CSDC2-202ENST00000460790 NFE2L3Q9Y4A8 694 aa12.01□□□□□ -0.49
CSDC2-202ENST00000460790 UBE4BO95155 1302 aa12.01□□□□□ -0.49
CSDC2-202ENST00000460790 MBLAC1A4D2B0 266 aaPredicted RBP12□□□□□ -0.49
CSDC2-202ENST00000460790 H0YCG3 227 aa12□□□□□ -0.49
CSDC2-202ENST00000460790 K7ENM7 598 aa12□□□□□ -0.49
CSDC2-202ENST00000460790 PDXKO00764 312 aa12□□□□□ -0.49
CSDC2-202ENST00000460790 ZNF18P17022 549 aa12□□□□□ -0.49
CSDC2-202ENST00000460790 SCP2P22307 547 aa12□□□□□ -0.49
CSDC2-202ENST00000460790 TMOD1P28289 359 aa12□□□□□ -0.49
CSDC2-202ENST00000460790 HOXC8P31273 242 aa12□□□□□ -0.49
CSDC2-202ENST00000460790 ABCD1P33897 745 aa12□□□□□ -0.49
CSDC2-202ENST00000460790 CTCFP49711 727 aaPredicted RBP12□□□□□ -0.49
CSDC2-202ENST00000460790 LBX1P52954 281 aa12□□□□□ -0.49
CSDC2-202ENST00000460790 CHMP4BP1P59074 171 aa12□□□□□ -0.49
CSDC2-202ENST00000460790 LRRC63Q05C16 580 aa12□□□□□ -0.49
CSDC2-202ENST00000460790 KCNA1Q09470 495 aa12□□□□□ -0.49
CSDC2-202ENST00000460790 LAMTOR4Q0VGL1 99 aa12□□□□□ -0.49
CSDC2-202ENST00000460790 TPD52L1Q16890 204 aaPredicted RBP12□□□□□ -0.49
CSDC2-202ENST00000460790 SLC9C1Q4G0N8 1177 aa12□□□□□ -0.49
CSDC2-202ENST00000460790 ZCWPW2Q504Y3 356 aa12□□□□□ -0.49
CSDC2-202ENST00000460790 PPP4R3CPQ6ZMV5 832 aa12□□□□□ -0.49
CSDC2-202ENST00000460790 NELFCDQ8IXH7 590 aa12□□□□□ -0.49
CSDC2-202ENST00000460790 LRRC71Q8N4P6 559 aa12□□□□□ -0.49
CSDC2-202ENST00000460790 LMBR1Q8WVP7 490 aa12□□□□□ -0.49
CSDC2-202ENST00000460790 PSPC1Q8WXF1 523 aaKnown RBP12□□□□□ -0.49
CSDC2-202ENST00000460790 HVCN1Q96D96 273 aa12□□□□□ -0.49
CSDC2-202ENST00000460790 ZBTB10Q96DT7 871 aa12□□□□□ -0.49
CSDC2-202ENST00000460790 TSG101Q99816 390 aa12□□□□□ -0.49
CSDC2-202ENST00000460790 TSEN34Q9BSV6 310 aaKnown RBP12□□□□□ -0.49
CSDC2-202ENST00000460790 XRN2Q9H0D6 950 aaKnown RBP eCLIP12□□□□□ -0.49
CSDC2-202ENST00000460790 UNC93B1Q9H1C4 597 aa12□□□□□ -0.49
CSDC2-202ENST00000460790 SAMSN1Q9NSI8 373 aaKnown RBP12□□□□□ -0.49
CSDC2-202ENST00000460790 ARHGAP28Q9P2N2 729 aa12□□□□□ -0.49
CSDC2-202ENST00000460790 HDAC6Q9UBN7 1215 aa12□□□□□ -0.49
CSDC2-202ENST00000460790 TRAF3IP3Q9Y228 551 aa12□□□□□ -0.49
CSDC2-202ENST00000460790 SMIM35A0A1B0GVV1 85 aa11.99□□□□□ -0.49
CSDC2-202ENST00000460790 C17orf102A2RUQ5 167 aa11.99□□□□□ -0.49
CSDC2-202ENST00000460790 TGFB1I1O43294 461 aa11.99□□□□□ -0.49
CSDC2-202ENST00000460790 CALUO43852 315 aaPredicted RBP11.99□□□□□ -0.49
CSDC2-202ENST00000460790 CABYRO75952 493 aa11.99□□□□□ -0.49
CSDC2-202ENST00000460790 HSPA1AP0DMV8 641 aaKnown RBP11.99□□□□□ -0.49
CSDC2-202ENST00000460790 HSPA1BP0DMV9 641 aaKnown RBP11.99□□□□□ -0.49
CSDC2-202ENST00000460790 GNAT1P11488 350 aa11.99□□□□□ -0.49
CSDC2-202ENST00000460790 CLCN3P51790 818 aa11.99□□□□□ -0.49
CSDC2-202ENST00000460790 POU5F1BQ06416 359 aa11.99□□□□□ -0.49
CSDC2-202ENST00000460790 CAPSQ13938 189 aa11.99□□□□□ -0.49
CSDC2-202ENST00000460790 HIC1Q14526 733 aa11.99□□□□□ -0.49
CSDC2-202ENST00000460790 PKN2Q16513 984 aaKnown RBP11.99□□□□□ -0.49
CSDC2-202ENST00000460790 EDRF1Q3B7T1 1238 aa11.99□□□□□ -0.49
CSDC2-202ENST00000460790 NBPF20Q3BBV1 942 aa11.99□□□□□ -0.49
CSDC2-202ENST00000460790 CDKAL1Q5VV42 579 aa11.99□□□□□ -0.49
CSDC2-202ENST00000460790 NFRKBQ6P4R8 1299 aa11.99□□□□□ -0.49
CSDC2-202ENST00000460790 KSR1Q8IVT5 923 aa11.99□□□□□ -0.49
CSDC2-202ENST00000460790 KIAA0319LQ8IZA0 1049 aa11.99□□□□□ -0.49
CSDC2-202ENST00000460790 C7orf31Q8N865 590 aa11.99□□□□□ -0.49
CSDC2-202ENST00000460790 ARRDC4Q8NCT1 418 aa11.99□□□□□ -0.49
CSDC2-202ENST00000460790 NOC3LQ8WTT2 800 aaKnown RBP11.99□□□□□ -0.49
CSDC2-202ENST00000460790 ACCSQ96QU6 501 aa11.99□□□□□ -0.49
CSDC2-202ENST00000460790 KIFC3Q9BVG8 833 aa11.99□□□□□ -0.49
CSDC2-202ENST00000460790 SRRTQ9BXP5 876 aaKnown RBP11.99□□□□□ -0.49
CSDC2-202ENST00000460790 TMEM134Q9H6X4 195 aa11.99□□□□□ -0.49
CSDC2-202ENST00000460790 TMEM206Q9H813 350 aa11.99□□□□□ -0.49
CSDC2-202ENST00000460790 PAK6Q9NQU5 681 aaPredicted RBP11.99□□□□□ -0.49
CSDC2-202ENST00000460790 TYW1Q9NV66 732 aaKnown RBP11.99□□□□□ -0.49
CSDC2-202ENST00000460790 TBX20Q9UMR3 447 aa11.99□□□□□ -0.49
CSDC2-202ENST00000460790 ADGRA3Q8IWK6 1321 aa11.99□□□□□ -0.49
CSDC2-202ENST00000460790 SIP14410 1827 aa11.99□□□□□ -0.49
CSDC2-202ENST00000460790 DENND3A2RUS2 1198 aa11.98□□□□□ -0.49
CSDC2-202ENST00000460790 MOXD2PA6NHM9 499 aa11.98□□□□□ -0.49
CSDC2-202ENST00000460790 LRRIQ4A6NIV6 560 aa11.98□□□□□ -0.49
CSDC2-202ENST00000460790 AP5Z1O43299 807 aa11.98□□□□□ -0.49
CSDC2-202ENST00000460790 FGFR1OPO95684 399 aaKnown RBP11.98□□□□□ -0.49
CSDC2-202ENST00000460790 MYCNP04198 464 aaPredicted RBP11.98□□□□□ -0.49
CSDC2-202ENST00000460790 ACLYP53396 1101 aa11.98□□□□□ -0.49
CSDC2-202ENST00000460790 SNRPFP62306 86 aaKnown RBP11.98□□□□□ -0.49
CSDC2-202ENST00000460790 FKBP3Q00688 224 aaKnown RBP11.98□□□□□ -0.49
CSDC2-202ENST00000460790 TFDP1Q14186 410 aa11.98□□□□□ -0.49
CSDC2-202ENST00000460790 MTFR1Q15390 333 aa11.98□□□□□ -0.49
CSDC2-202ENST00000460790 NFIL3Q16649 462 aa11.98□□□□□ -0.49
CSDC2-202ENST00000460790 FBXO46Q6PJ61 603 aaPredicted RBP11.98□□□□□ -0.49
CSDC2-202ENST00000460790 SARM1Q6SZW1 724 aa11.98□□□□□ -0.49
CSDC2-202ENST00000460790 TAS1R3Q7RTX0 852 aa11.98□□□□□ -0.49
CSDC2-202ENST00000460790 SESTD1Q86VW0 696 aa11.98□□□□□ -0.49
CSDC2-202ENST00000460790 IRF2BP1Q8IU81 584 aa11.98□□□□□ -0.49
CSDC2-202ENST00000460790 RHPN2Q8IUC4 686 aa11.98□□□□□ -0.49
CSDC2-202ENST00000460790 ZC3H3Q8IXZ2 948 aaKnown RBP11.98□□□□□ -0.49
CSDC2-202ENST00000460790 SYCP3Q8IZU3 236 aa11.98□□□□□ -0.49
CSDC2-202ENST00000460790 CSGALNACT2Q8N6G5 542 aa11.98□□□□□ -0.49
CSDC2-202ENST00000460790 RNF149Q8NC42 400 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms