RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 HMGB1P1B2RPK0 211 aaPredicted RBP17.21■□□□□ 0.35
CMTM3-203ENST00000460097 B4DLN1 442 aa17.21■□□□□ 0.35
CMTM3-203ENST00000460097 PIK3CDO00329 1044 aa17.21■□□□□ 0.35
CMTM3-203ENST00000460097 MEIS2O14770 477 aa17.21■□□□□ 0.35
CMTM3-203ENST00000460097 CCDC172P0C7W6 258 aa17.21■□□□□ 0.35
CMTM3-203ENST00000460097 ALDH5A1P51649 535 aaPredicted RBP17.21■□□□□ 0.35
CMTM3-203ENST00000460097 TBC1D8BQ0IIM8 1120 aa17.21■□□□□ 0.35
CMTM3-203ENST00000460097 PAK2Q13177 524 aa17.21■□□□□ 0.35
CMTM3-203ENST00000460097 MAP3K21Q5TCX8 1036 aa17.21■□□□□ 0.35
CMTM3-203ENST00000460097 PPP4R3AQ6IN85 833 aa17.21■□□□□ 0.35
CMTM3-203ENST00000460097 USP17L6PQ6QN14 398 aa17.21■□□□□ 0.35
CMTM3-203ENST00000460097 NSUN6Q8TEA1 469 aaKnown RBP17.21■□□□□ 0.35
CMTM3-203ENST00000460097 WHAMMQ8TF30 809 aa17.21■□□□□ 0.35
CMTM3-203ENST00000460097 CCDC47Q96A33 483 aaKnown RBP17.21■□□□□ 0.35
CMTM3-203ENST00000460097 RMDN3Q96TC7 470 aa17.21■□□□□ 0.35
CMTM3-203ENST00000460097 MPHOSPH6Q99547 160 aaKnown RBP17.21■□□□□ 0.35
CMTM3-203ENST00000460097 DUSP9Q99956 384 aaKnown RBP17.21■□□□□ 0.35
CMTM3-203ENST00000460097 GLT8D2Q9H1C3 349 aa17.21■□□□□ 0.35
CMTM3-203ENST00000460097 ACTR5Q9H9F9 607 aaPredicted RBP17.21■□□□□ 0.35
CMTM3-203ENST00000460097 HMX1Q9NP08 348 aaPredicted RBP17.21■□□□□ 0.35
CMTM3-203ENST00000460097 AGPAT5Q9NUQ2 364 aa17.21■□□□□ 0.35
CMTM3-203ENST00000460097 PCDHA13Q9Y5I0 950 aa17.21■□□□□ 0.35
CMTM3-203ENST00000460097 PLXNA1Q9UIW2 1896 aa17.21■□□□□ 0.35
CMTM3-203ENST00000460097 RPTORQ8N122 1335 aa17.2■□□□□ 0.34
CMTM3-203ENST00000460097 LSP1P33241 339 aa17.2■□□□□ 0.34
CMTM3-203ENST00000460097 MTFR1Q15390 333 aa17.2■□□□□ 0.34
CMTM3-203ENST00000460097 FKBP15Q5T1M5 1219 aa17.2■□□□□ 0.34
CMTM3-203ENST00000460097 ARHGEF16Q5VV41 709 aa17.2■□□□□ 0.34
CMTM3-203ENST00000460097 FBXW10Q5XX13 1052 aa17.2■□□□□ 0.34
CMTM3-203ENST00000460097 ARMCX2Q7L311 632 aa17.2■□□□□ 0.34
CMTM3-203ENST00000460097 CCDC50Q8IVM0 306 aa17.2■□□□□ 0.34
CMTM3-203ENST00000460097 ARFGAP2Q8N6H7 521 aa17.2■□□□□ 0.34
CMTM3-203ENST00000460097 TSEN2Q8NCE0 465 aaKnown RBP17.2■□□□□ 0.34
CMTM3-203ENST00000460097 ARL8AQ96BM9 186 aa17.2■□□□□ 0.34
CMTM3-203ENST00000460097 RIC8AQ9NPQ8 531 aa17.2■□□□□ 0.34
CMTM3-203ENST00000460097 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.2■□□□□ 0.34
CMTM3-203ENST00000460097 CAPN7Q9Y6W3 813 aa17.2■□□□□ 0.34
CMTM3-203ENST00000460097 ZNF263O14978 683 aa17.2■□□□□ 0.34
CMTM3-203ENST00000460097 PPP1R37O75864 691 aa17.2■□□□□ 0.34
CMTM3-203ENST00000460097 SNAI1O95863 264 aaPredicted RBP17.2■□□□□ 0.34
CMTM3-203ENST00000460097 CCL5P13501 91 aa17.2■□□□□ 0.34
CMTM3-203ENST00000460097 PRPHP41219 470 aa17.2■□□□□ 0.34
CMTM3-203ENST00000460097 ADCY7P51828 1080 aa17.2■□□□□ 0.34
CMTM3-203ENST00000460097 ACTN3Q08043 901 aaPredicted RBP17.2■□□□□ 0.34
CMTM3-203ENST00000460097 NAALADL2Q58DX5 795 aa17.2■□□□□ 0.34
CMTM3-203ENST00000460097 PRAMEF19Q5SWL8 479 aa17.2■□□□□ 0.34
CMTM3-203ENST00000460097 LRIG3Q6UXM1 1119 aa17.2■□□□□ 0.34
CMTM3-203ENST00000460097 CSGALNACT2Q8N6G5 542 aa17.2■□□□□ 0.34
CMTM3-203ENST00000460097 STAMQ92783 540 aa17.2■□□□□ 0.34
CMTM3-203ENST00000460097 P2RX5Q93086 422 aa17.2■□□□□ 0.34
CMTM3-203ENST00000460097 GDAP1L1Q96MZ0 367 aa17.2■□□□□ 0.34
CMTM3-203ENST00000460097 ZIM3Q96PE6 472 aa17.2■□□□□ 0.34
CMTM3-203ENST00000460097 IFIH1Q9BYX4 1025 aaKnown RBP17.2■□□□□ 0.34
CMTM3-203ENST00000460097 ZMYND12Q9H0C1 365 aa17.2■□□□□ 0.34
CMTM3-203ENST00000460097 RNF208Q9H0X6 261 aa17.2■□□□□ 0.34
CMTM3-203ENST00000460097 C6orf50Q9HD87 102 aa17.2■□□□□ 0.34
CMTM3-203ENST00000460097 SSU72P8A0A1W2PR75 194 aa17.19■□□□□ 0.34
CMTM3-203ENST00000460097 ESYT2A0FGR8 921 aa17.19■□□□□ 0.34
CMTM3-203ENST00000460097 GNA11P29992 359 aa17.19■□□□□ 0.34
CMTM3-203ENST00000460097 PSEN1P49768 467 aa17.19■□□□□ 0.34
CMTM3-203ENST00000460097 PMS1P54277 932 aaKnown RBP17.19■□□□□ 0.34
CMTM3-203ENST00000460097 PTGISQ16647 500 aa17.19■□□□□ 0.34
CMTM3-203ENST00000460097 CFAP221Q4G0U5 840 aa17.19■□□□□ 0.34
CMTM3-203ENST00000460097 CCDC181Q5TID7 509 aa17.19■□□□□ 0.34
CMTM3-203ENST00000460097 NAA35Q5VZE5 725 aa17.19■□□□□ 0.34
CMTM3-203ENST00000460097 C8orf74Q6P047 294 aa17.19■□□□□ 0.34
CMTM3-203ENST00000460097 MORC4Q8TE76 937 aa17.19■□□□□ 0.34
CMTM3-203ENST00000460097 HDAC7Q8WUI4 952 aa17.19■□□□□ 0.34
CMTM3-203ENST00000460097 P3H4Q92791 437 aa17.19■□□□□ 0.34
CMTM3-203ENST00000460097 IWS1Q96ST2 819 aa17.19■□□□□ 0.34
CMTM3-203ENST00000460097 UNC93B1Q9H1C4 597 aa17.19■□□□□ 0.34
CMTM3-203ENST00000460097 ABHD16BQ9H3Z7 469 aa17.19■□□□□ 0.34
CMTM3-203ENST00000460097 PXMP2Q9NR77 195 aa17.19■□□□□ 0.34
CMTM3-203ENST00000460097 LRWD1Q9UFC0 647 aa17.19■□□□□ 0.34
CMTM3-203ENST00000460097 MACROD2A1Z1Q3 448 aa17.18■□□□□ 0.34
CMTM3-203ENST00000460097 TRIM49BA6NDI0 452 aa17.18■□□□□ 0.34
CMTM3-203ENST00000460097 RBAK-RBAKDNI3L0D1 243 aa17.18■□□□□ 0.34
CMTM3-203ENST00000460097 CES2O00748 559 aa17.18■□□□□ 0.34
CMTM3-203ENST00000460097 RASSF9O75901 435 aa17.18■□□□□ 0.34
CMTM3-203ENST00000460097 FAM107AO95990 144 aa17.18■□□□□ 0.34
CMTM3-203ENST00000460097 CYBAP13498 195 aa17.18■□□□□ 0.34
CMTM3-203ENST00000460097 EIF2AK2P19525 551 aaKnown RBP17.18■□□□□ 0.34
CMTM3-203ENST00000460097 CNGA1P29973 690 aa17.18■□□□□ 0.34
CMTM3-203ENST00000460097 NLRP5P59047 1200 aa17.18■□□□□ 0.34
CMTM3-203ENST00000460097 UBE2SQ16763 222 aa17.18■□□□□ 0.34
CMTM3-203ENST00000460097 MIIPQ5JXC2 388 aa17.18■□□□□ 0.34
CMTM3-203ENST00000460097 CFAP58Q5T655 872 aa17.18■□□□□ 0.34
CMTM3-203ENST00000460097 GALNT17Q6IS24 598 aa17.18■□□□□ 0.34
CMTM3-203ENST00000460097 C6orf89Q6UWU4 347 aa17.18■□□□□ 0.34
CMTM3-203ENST00000460097 ZBTB9Q96C00 473 aa17.18■□□□□ 0.34
CMTM3-203ENST00000460097 AK8Q96MA6 479 aa17.18■□□□□ 0.34
CMTM3-203ENST00000460097 CAPN6Q9Y6Q1 641 aa17.18■□□□□ 0.34
CMTM3-203ENST00000460097 BRCA2P51587 3418 aa17.18■□□□□ 0.34
CMTM3-203ENST00000460097 EDNRBP24530 442 aa17.17■□□□□ 0.34
CMTM3-203ENST00000460097 CCND3P30281 292 aaPredicted RBP17.17■□□□□ 0.34
CMTM3-203ENST00000460097 PDE4DQ08499 809 aa17.17■□□□□ 0.34
CMTM3-203ENST00000460097 ACVR2BQ13705 512 aa17.17■□□□□ 0.34
CMTM3-203ENST00000460097 PREPLQ4J6C6 727 aaPredicted RBP17.17■□□□□ 0.34
CMTM3-203ENST00000460097 WLSQ5T9L3 541 aa17.17■□□□□ 0.34
CMTM3-203ENST00000460097 TRPV1Q8NER1 839 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms